RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PPM2Q08282 695 aa6.55□□□□□ -1.36
PDB1YBR221C FRT1Q99332 602 aa6.55□□□□□ -1.36
PDB1YBR221C HSP82P02829 709 aaKnown RBP6.54□□□□□ -1.36
PDB1YBR221C SPS1P08458 490 aa6.54□□□□□ -1.36
PDB1YBR221C MPH2P0CD99 609 aa6.54□□□□□ -1.36
PDB1YBR221C MPH3P0CE00 602 aa6.54□□□□□ -1.36
PDB1YBR221C MIP1P15801 1254 aa6.54□□□□□ -1.36
PDB1YBR221C YEF3P16521 1044 aaKnown RBP6.54□□□□□ -1.36
PDB1YBR221C SAS3P34218 831 aa6.54□□□□□ -1.36
PDB1YBR221C VPS29P38759 282 aa6.54□□□□□ -1.36
PDB1YBR221C RTF1P53064 558 aa6.54□□□□□ -1.36
PDB1YBR221C CWC24P53769 259 aa6.54□□□□□ -1.36
PDB1YBR221C CTF4Q01454 927 aa6.54□□□□□ -1.36
PDB1YBR221C PRP3Q03338 469 aaPredicted RBP6.54□□□□□ -1.36
PDB1YBR221C YDR341CQ05506 607 aaKnown RBP6.54□□□□□ -1.36
PDB1YBR221C HSP42Q12329 375 aa6.54□□□□□ -1.36
PDB1YBR221C MMP1Q12372 583 aa6.54□□□□□ -1.36
PDB1YBR221C NOP14Q99207 810 aaKnown RBP6.54□□□□□ -1.36
PDB1YBR221C IKI3Q06706 1349 aaKnown RBP6.53□□□□□ -1.36
PDB1YBR221C CYB2P00175 591 aa6.53□□□□□ -1.36
PDB1YBR221C BRF1P29056 596 aa6.53□□□□□ -1.36
PDB1YBR221C MCM2P29469 868 aa6.53□□□□□ -1.36
PDB1YBR221C TIM23P32897 222 aa6.53□□□□□ -1.36
PDB1YBR221C PES4P39684 611 aa6.53□□□□□ -1.36
PDB1YBR221C CHZ1P40019 153 aaPredicted RBP6.53□□□□□ -1.36
PDB1YBR221C MTR4P47047 1073 aaKnown RBP6.53□□□□□ -1.36
PDB1YBR221C SRB7P47822 140 aa6.53□□□□□ -1.36
PDB1YBR221C SRP1Q02821 542 aaKnown RBP6.53□□□□□ -1.36
PDB1YBR221C SPR28Q04921 423 aa6.53□□□□□ -1.36
PDB1YBR221C PNP1Q05788 311 aa6.53□□□□□ -1.36
PDB1YBR221C PSK1P31374 1356 aa6.53□□□□□ -1.36
PDB1YBR221C RTC1Q08281 1341 aa6.52□□□□□ -1.37
PDB1YBR221C SRS2P12954 1174 aa6.52□□□□□ -1.37
PDB1YBR221C CLB5P30283 435 aa6.52□□□□□ -1.37
PDB1YBR221C THI4P32318 326 aa6.52□□□□□ -1.37
PDB1YBR221C PPH3P32345 308 aa6.52□□□□□ -1.37
PDB1YBR221C PEP7P32609 515 aa6.52□□□□□ -1.37
PDB1YBR221C MNR2P35724 969 aa6.52□□□□□ -1.37
PDB1YBR221C BOL3P39724 118 aa6.52□□□□□ -1.37
PDB1YBR221C QDR1P40475 563 aa6.52□□□□□ -1.37
PDB1YBR221C TAF1P46677 1066 aa6.52□□□□□ -1.37
PDB1YBR221C CTH1P47976 325 aa6.52□□□□□ -1.37
PDB1YBR221C GPI8P49018 411 aa6.52□□□□□ -1.37
PDB1YBR221C MTO1P53070 669 aa6.52□□□□□ -1.37
PDB1YBR221C FOX2Q02207 900 aaKnown RBP6.52□□□□□ -1.37
PDB1YBR221C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
PDB1YBR221C FUR4P05316 633 aaKnown RBP6.51□□□□□ -1.37
PDB1YBR221C ARG8P18544 423 aa6.51□□□□□ -1.37
PDB1YBR221C ESS1P22696 170 aa6.51□□□□□ -1.37
PDB1YBR221C GRX1P25373 110 aaKnown RBP6.51□□□□□ -1.37
PDB1YBR221C HIR1P32479 840 aa6.51□□□□□ -1.37
PDB1YBR221C TAT2P38967 592 aa6.51□□□□□ -1.37
PDB1YBR221C SEC27P41811 889 aaKnown RBP6.51□□□□□ -1.37
PDB1YBR221C MSB3P48566 633 aaPredicted RBP6.51□□□□□ -1.37
PDB1YBR221C SCY1P53009 804 aa6.51□□□□□ -1.37
PDB1YBR221C GRX3Q03835 250 aa6.51□□□□□ -1.37
PDB1YBR221C PHM6Q05637 104 aa6.51□□□□□ -1.37
PDB1YBR221C YLR257WQ06146 321 aaKnown RBP6.51□□□□□ -1.37
PDB1YBR221C ROM2P51862 1356 aaKnown RBP6.51□□□□□ -1.37
PDB1YBR221C SSH4P32343 579 aa6.5□□□□□ -1.37
PDB1YBR221C APL2P36000 726 aaPredicted RBP6.5□□□□□ -1.37
PDB1YBR221C RRN3P36070 627 aa6.5□□□□□ -1.37
PDB1YBR221C MEP1P40260 492 aa6.5□□□□□ -1.37
PDB1YBR221C PRP43P53131 767 aaKnown RBP6.5□□□□□ -1.37
PDB1YBR221C FPK1P53739 893 aa6.5□□□□□ -1.37
PDB1YBR221C VIP1Q06685 1146 aaKnown RBP6.5□□□□□ -1.37
PDB1YBR221C TCB1Q12466 1186 aa6.5□□□□□ -1.37
PDB1YBR221C TMA17Q12513 150 aa6.5□□□□□ -1.37
PDB1YBR221C RRP5Q05022 1729 aaKnown RBP6.5□□□□□ -1.37
PDB1YBR221C ADR1P07248 1323 aa6.5□□□□□ -1.37
PDB1YBR221C PIF1P07271 859 aa6.49□□□□□ -1.37
PDB1YBR221C RDS2P19541 446 aaKnown RBP6.49□□□□□ -1.37
PDB1YBR221C ANP1P32629 500 aa6.49□□□□□ -1.37
PDB1YBR221C PRP40P33203 583 aaKnown RBP6.49□□□□□ -1.37
PDB1YBR221C RPT1P33299 467 aaKnown RBP6.49□□□□□ -1.37
PDB1YBR221C PTC3P34221 468 aaKnown RBP6.49□□□□□ -1.37
PDB1YBR221C YKL222CP35995 705 aa6.49□□□□□ -1.37
PDB1YBR221C BCH2P36122 765 aa6.49□□□□□ -1.37
PDB1YBR221C TIM54P47045 478 aa6.49□□□□□ -1.37
PDB1YBR221C RCM1P53972 490 aa6.49□□□□□ -1.37
PDB1YBR221C UBX4P54730 416 aa6.49□□□□□ -1.37
PDB1YBR221C SPC19Q03954 165 aa6.49□□□□□ -1.37
PDB1YBR221C SSM4P40318 1319 aa6.49□□□□□ -1.37
PDB1YBR221C NUP192P47054 1683 aa6.49□□□□□ -1.37
PDB1YBR221C PGI1P12709 554 aaKnown RBP6.48□□□□□ -1.37
PDB1YBR221C GFD2P25370 566 aaKnown RBP6.48□□□□□ -1.37
PDB1YBR221C NSR1P27476 414 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
PDB1YBR221C PET112P33893 541 aa6.48□□□□□ -1.37
PDB1YBR221C NIT1P40447 199 aa6.48□□□□□ -1.37
PDB1YBR221C EPS1P40557 701 aa6.48□□□□□ -1.37
PDB1YBR221C NIS1P53939 407 aa6.48□□□□□ -1.37
PDB1YBR221C NAN1Q02931 896 aaKnown RBP6.48□□□□□ -1.37
PDB1YBR221C SND1Q04007 877 aa6.48□□□□□ -1.37
PDB1YBR221C YLR352WQ06479 807 aa6.48□□□□□ -1.37
PDB1YBR221C NOP58Q12499 511 aaKnown RBP6.48□□□□□ -1.37
PDB1YBR221C YRF1-2P40105 1681 aa6.47□□□□□ -1.37
PDB1YBR221C RNA1P11745 407 aaKnown RBP6.47□□□□□ -1.37
PDB1YBR221C YJU3P28321 313 aa6.47□□□□□ -1.37
PDB1YBR221C SLX5P32828 619 aaKnown RBP6.47□□□□□ -1.37
PDB1YBR221C MRS6P32864 603 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms