Protein–RNA interactions for Protein: P32343

SSH4, Protein SSH4, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH4P32343 YML009W-BYML009W-B 477 nt19.44■□□□□ 0.7
SSH4P32343 NSR1YGR159C 1245 nt19.24■□□□□ 0.67
SSH4P32343 NOP1YDL014W 984 nt18.93■□□□□ 0.62
SSH4P32343 YKL036CYKL036C 393 nt17.39■□□□□ 0.37
SSH4P32343 MDJ1YFL016C 1536 nt17.08■□□□□ 0.32
SSH4P32343 SRX1YKL086W 384 nt16.44■□□□□ 0.22
SSH4P32343 Q0297Q0297 156 nt16.43■□□□□ 0.22
SSH4P32343 YJL027CYJL027C 417 nt16.28■□□□□ 0.2
SSH4P32343 SCS3YGL126W 1143 nt15.76■□□□□ 0.11
SSH4P32343 YCR051WYCR051W 669 nt15.69■□□□□ 0.1
SSH4P32343 YOL085CYOL085C 342 nt14.99□□□□□ -0.01
SSH4P32343 DBP2YNL112W 1641 nt14.99□□□□□ -0.01
SSH4P32343 TRN1tP(UGG)A 72 nt14.84□□□□□ -0.03
SSH4P32343 SUF9tP(UGG)F 72 nt14.84□□□□□ -0.03
SSH4P32343 SUF8tP(UGG)H 72 nt14.84□□□□□ -0.03
SSH4P32343 tP(UGG)LtP(UGG)L 72 nt14.84□□□□□ -0.03
SSH4P32343 SUF7tP(UGG)M 72 nt14.84□□□□□ -0.03
SSH4P32343 tP(UGG)N1tP(UGG)N1 72 nt14.84□□□□□ -0.03
SSH4P32343 tP(UGG)N2tP(UGG)N2 72 nt14.84□□□□□ -0.03
SSH4P32343 tP(UGG)O1tP(UGG)O1 72 nt14.84□□□□□ -0.03
SSH4P32343 SUF11tP(UGG)O2 72 nt14.84□□□□□ -0.03
SSH4P32343 PKP1YIL042C 1185 nt14.81□□□□□ -0.04
SSH4P32343 CCC1YLR220W 969 nt14.79□□□□□ -0.04
SSH4P32343 RPP1BYDL130W 321 nt14.78□□□□□ -0.04
SSH4P32343 YBR190WYBR190W 312 nt14.58□□□□□ -0.08
SSH4P32343 RTC3YHR087W 336 nt14.38□□□□□ -0.11
SSH4P32343 RVS167YDR388W 1449 nt14.37□□□□□ -0.11
SSH4P32343 Q0182Q0182 405 nt14.16□□□□□ -0.14
SSH4P32343 PET122YER153C 765 nt14.1□□□□□ -0.15
SSH4P32343 SCR1SCR1 522 nt14.1□□□□□ -0.15
SSH4P32343 ATS1YAL020C 1002 nt14.09□□□□□ -0.15
SSH4P32343 SCJ1YMR214W 1134 nt14.07□□□□□ -0.16
SSH4P32343 tP(UGG)O3tP(UGG)O3 72 nt14.06□□□□□ -0.16
SSH4P32343 SHR5YOL110W 714 nt13.76□□□□□ -0.21
SSH4P32343 RRN5YLR141W 1092 nt13.69□□□□□ -0.22
SSH4P32343 YDJ1YNL064C 1230 nt13.59□□□□□ -0.23
SSH4P32343 RSB1YOR049C 1065 nt13.51□□□□□ -0.25
SSH4P32343 YER088W-BYER088W-B 147 nt13.41□□□□□ -0.26
SSH4P32343 MOT3YMR070W 1473 nt13.39□□□□□ -0.27
SSH4P32343 URN1YPR152C 1398 nt13.38□□□□□ -0.27
SSH4P32343 DEP1YAL013W 1218 nt13.37□□□□□ -0.27
SSH4P32343 GAR1YHR089C 618 nt13.34□□□□□ -0.27
SSH4P32343 RPN10YHR200W 807 nt13.3□□□□□ -0.28
SSH4P32343 YNL208WYNL208W 600 nt13.19□□□□□ -0.3
SSH4P32343 PUT4YOR348C 1884 nt13.14□□□□□ -0.31
SSH4P32343 OPI9YLR338W 858 nt13.13□□□□□ -0.31
SSH4P32343 SAH1YER043C 1350 nt13.05□□□□□ -0.32
SSH4P32343 PST2YDR032C 597 nt12.99□□□□□ -0.33
SSH4P32343 ARE1YCR048W 1833 nt12.92□□□□□ -0.34
SSH4P32343 TIR1YER011W 765 nt12.87□□□□□ -0.35
SSH4P32343 YHR049C-AYHR049C-A 297 nt12.86□□□□□ -0.35
SSH4P32343 PUN1YLR414C 792 nt12.83□□□□□ -0.36
SSH4P32343 POA1YBR022W 534 nt12.81□□□□□ -0.36
SSH4P32343 YJR018WYJR018W 363 nt12.76□□□□□ -0.37
SSH4P32343 PTC2YER089C 1395 nt12.64□□□□□ -0.39
SSH4P32343 SSA1YAL005C 1929 nt12.64□□□□□ -0.39
SSH4P32343 BUD23YCR047C 828 nt12.63□□□□□ -0.39
SSH4P32343 RPP2BYDR382W 333 nt12.62□□□□□ -0.39
SSH4P32343 YKL097CYKL097C 411 nt12.62□□□□□ -0.39
SSH4P32343 BSC6YOL137W 1494 nt12.53□□□□□ -0.4
SSH4P32343 SHU1YHL006C 453 nt12.49□□□□□ -0.41
SSH4P32343 NAB2YGL122C 1578 nt12.48□□□□□ -0.41
SSH4P32343 SSA3YBL075C 1950 nt12.48□□□□□ -0.41
SSH4P32343 FPR4YLR449W 1179 nt12.39□□□□□ -0.43
SSH4P32343 YJR120WYJR120W 351 nt12.37□□□□□ -0.43
SSH4P32343 DAL1YIR027C 1383 nt12.32□□□□□ -0.44
SSH4P32343 INM2YDR287W 879 nt12.32□□□□□ -0.44
SSH4P32343 YAL037C-BYAL037C-B 975 nt12.32□□□□□ -0.44
SSH4P32343 YGR021WYGR021W 873 nt12.3□□□□□ -0.44
SSH4P32343 SRB2YHR041C 633 nt12.3□□□□□ -0.44
SSH4P32343 WWM1YFL010C 636 nt12.27□□□□□ -0.45
SSH4P32343 BDH2YAL061W 1254 nt12.25□□□□□ -0.45
SSH4P32343 FIS1YIL065C 468 nt12.22□□□□□ -0.45
SSH4P32343 YBL100CYBL100C 315 nt12.22□□□□□ -0.45
SSH4P32343 PHO4YFR034C 939 nt12.19□□□□□ -0.46
SSH4P32343 HOM6YJR139C 1080 nt12.14□□□□□ -0.47
SSH4P32343 YFL021C-AYFL021C-A 855 nt12.13□□□□□ -0.47
SSH4P32343 MNP1YGL068W 585 nt12.11□□□□□ -0.47
SSH4P32343 NPL3YDR432W 1245 nt12.07□□□□□ -0.48
SSH4P32343 LSM3YLR438C-A 270 nt12.07□□□□□ -0.48
SSH4P32343 TRM9YML014W 840 nt12.07□□□□□ -0.48
SSH4P32343 FUN26YAL022C 1554 nt12.03□□□□□ -0.48
SSH4P32343 RKM5YLR137W 1104 nt11.99□□□□□ -0.49
SSH4P32343 ALF1YNL148C 765 nt11.99□□□□□ -0.49
SSH4P32343 YOL037CYOL037C 354 nt11.97□□□□□ -0.49
SSH4P32343 YOR139CYOR139C 393 nt11.95□□□□□ -0.5
SSH4P32343 SUF2tP(AGG)C 72 nt11.9□□□□□ -0.5
SSH4P32343 SUF10tP(AGG)N 72 nt11.9□□□□□ -0.5
SSH4P32343 YPS1YLR120C 1710 nt11.9□□□□□ -0.5
SSH4P32343 YHR165W-AYHR165W-A 312 nt11.89□□□□□ -0.51
SSH4P32343 CCT6YDR188W 1641 nt11.87□□□□□ -0.51
SSH4P32343 YDR095CYDR095C 411 nt11.83□□□□□ -0.52
SSH4P32343 MEP2YNL142W 1500 nt11.74□□□□□ -0.53
SSH4P32343 SPT5YML010W 3192 nt11.67□□□□□ -0.54
SSH4P32343 RPP2AYOL039W 321 nt11.66□□□□□ -0.54
SSH4P32343 SIS1YNL007C 1059 nt11.62□□□□□ -0.55
SSH4P32343 YJL152WYJL152W 360 nt11.6□□□□□ -0.55
SSH4P32343 WHI5YOR083W 888 nt11.6□□□□□ -0.55
SSH4P32343 YLR154C-GYLR154C-G 150 nt11.59□□□□□ -0.55
SSH4P32343 YLR281CYLR281C 468 nt11.59□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms