Protein–RNA interactions for Protein: P53131

PRP43, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP43P53131 YML009W-BYML009W-B 477 nt27.38■■□□□ 1.97
PRP43P53131 NSR1YGR159C 1245 nt26.67■■□□□ 1.86
PRP43P53131 NOP1YDL014W 984 nt26.65■■□□□ 1.86
PRP43P53131 YKL036CYKL036C 393 nt25.03■■□□□ 1.6
PRP43P53131 YJL027CYJL027C 417 nt23.52■■□□□ 1.36
PRP43P53131 MDJ1YFL016C 1536 nt23.45■■□□□ 1.34
PRP43P53131 Q0297Q0297 156 nt23.43■■□□□ 1.34
PRP43P53131 SRX1YKL086W 384 nt23.29■■□□□ 1.32
PRP43P53131 SCS3YGL126W 1143 nt23.02■■□□□ 1.28
PRP43P53131 YCR051WYCR051W 669 nt22.29■■□□□ 1.16
PRP43P53131 YOL085CYOL085C 342 nt21.69■■□□□ 1.06
PRP43P53131 PKP1YIL042C 1185 nt21.47■■□□□ 1.03
PRP43P53131 RPP1BYDL130W 321 nt21.07■□□□□ 0.96
PRP43P53131 CCC1YLR220W 969 nt20.82■□□□□ 0.92
PRP43P53131 DBP2YNL112W 1641 nt20.81■□□□□ 0.92
PRP43P53131 TRN1tP(UGG)A 72 nt20.8■□□□□ 0.92
PRP43P53131 SUF9tP(UGG)F 72 nt20.8■□□□□ 0.92
PRP43P53131 SUF8tP(UGG)H 72 nt20.8■□□□□ 0.92
PRP43P53131 tP(UGG)LtP(UGG)L 72 nt20.8■□□□□ 0.92
PRP43P53131 SUF7tP(UGG)M 72 nt20.8■□□□□ 0.92
PRP43P53131 tP(UGG)N1tP(UGG)N1 72 nt20.8■□□□□ 0.92
PRP43P53131 tP(UGG)N2tP(UGG)N2 72 nt20.8■□□□□ 0.92
PRP43P53131 tP(UGG)O1tP(UGG)O1 72 nt20.8■□□□□ 0.92
PRP43P53131 SUF11tP(UGG)O2 72 nt20.8■□□□□ 0.92
PRP43P53131 SCJ1YMR214W 1134 nt20.74■□□□□ 0.91
PRP43P53131 ATS1YAL020C 1002 nt20.7■□□□□ 0.9
PRP43P53131 PET122YER153C 765 nt20.16■□□□□ 0.82
PRP43P53131 SCR1SCR1 522 nt20.02■□□□□ 0.8
PRP43P53131 tP(UGG)O3tP(UGG)O3 72 nt19.88■□□□□ 0.77
PRP43P53131 YBR190WYBR190W 312 nt19.73■□□□□ 0.75
PRP43P53131 RVS167YDR388W 1449 nt19.68■□□□□ 0.74
PRP43P53131 RRN5YLR141W 1092 nt19.65■□□□□ 0.74
PRP43P53131 RTC3YHR087W 336 nt19.51■□□□□ 0.71
PRP43P53131 RSB1YOR049C 1065 nt19.4■□□□□ 0.7
PRP43P53131 YER088W-BYER088W-B 147 nt19.22■□□□□ 0.67
PRP43P53131 YDJ1YNL064C 1230 nt19.12■□□□□ 0.65
PRP43P53131 PST2YDR032C 597 nt19.06■□□□□ 0.64
PRP43P53131 SHR5YOL110W 714 nt19.06■□□□□ 0.64
PRP43P53131 GAR1YHR089C 618 nt18.82■□□□□ 0.6
PRP43P53131 DEP1YAL013W 1218 nt18.59■□□□□ 0.57
PRP43P53131 YKL097CYKL097C 411 nt18.59■□□□□ 0.57
PRP43P53131 URN1YPR152C 1398 nt18.35■□□□□ 0.53
PRP43P53131 SHU1YHL006C 453 nt18.26■□□□□ 0.51
PRP43P53131 YNL208WYNL208W 600 nt18.17■□□□□ 0.5
PRP43P53131 TIR1YER011W 765 nt18.09■□□□□ 0.49
PRP43P53131 RPN10YHR200W 807 nt18.09■□□□□ 0.49
PRP43P53131 YAL037C-BYAL037C-B 975 nt17.98■□□□□ 0.47
PRP43P53131 OPI9YLR338W 858 nt17.9■□□□□ 0.46
PRP43P53131 SSA1YAL005C 1929 nt17.8■□□□□ 0.44
PRP43P53131 SAH1YER043C 1350 nt17.79■□□□□ 0.44
PRP43P53131 YOR139CYOR139C 393 nt17.76■□□□□ 0.43
PRP43P53131 SRB2YHR041C 633 nt17.64■□□□□ 0.41
PRP43P53131 PUT4YOR348C 1884 nt17.58■□□□□ 0.41
PRP43P53131 NPL3YDR432W 1245 nt17.55■□□□□ 0.4
PRP43P53131 YJR018WYJR018W 363 nt17.51■□□□□ 0.39
PRP43P53131 ARE1YCR048W 1833 nt17.43■□□□□ 0.38
PRP43P53131 WWM1YFL010C 636 nt17.43■□□□□ 0.38
PRP43P53131 MNP1YGL068W 585 nt17.42■□□□□ 0.38
PRP43P53131 PUN1YLR414C 792 nt17.39■□□□□ 0.37
PRP43P53131 HOM6YJR139C 1080 nt17.32■□□□□ 0.36
PRP43P53131 YGR021WYGR021W 873 nt17.31■□□□□ 0.36
PRP43P53131 YJR120WYJR120W 351 nt17.3■□□□□ 0.36
PRP43P53131 YHR049C-AYHR049C-A 297 nt17.28■□□□□ 0.36
PRP43P53131 RPP2BYDR382W 333 nt17.26■□□□□ 0.35
PRP43P53131 POA1YBR022W 534 nt17.22■□□□□ 0.35
PRP43P53131 PTC2YER089C 1395 nt17.2■□□□□ 0.34
PRP43P53131 YOL037CYOL037C 354 nt17.12■□□□□ 0.33
PRP43P53131 RKM5YLR137W 1104 nt17.08■□□□□ 0.32
PRP43P53131 tM(CAU)CtM(CAU)C 72 nt17.03■□□□□ 0.32
PRP43P53131 IMT4tM(CAU)E 72 nt17.03■□□□□ 0.32
PRP43P53131 IMT3tM(CAU)J3 72 nt17.03■□□□□ 0.32
PRP43P53131 IMT1tM(CAU)O1 72 nt17.03■□□□□ 0.32
PRP43P53131 IMT2tM(CAU)P 72 nt17.03■□□□□ 0.32
PRP43P53131 BUD23YCR047C 828 nt17.01■□□□□ 0.31
PRP43P53131 YFL021C-AYFL021C-A 855 nt17.01■□□□□ 0.31
PRP43P53131 BDH2YAL061W 1254 nt16.95■□□□□ 0.3
PRP43P53131 FPR4YLR449W 1179 nt16.87■□□□□ 0.29
PRP43P53131 SSA3YBL075C 1950 nt16.84■□□□□ 0.29
PRP43P53131 PUS2YGL063W 1113 nt16.84■□□□□ 0.29
PRP43P53131 NAB2YGL122C 1578 nt16.83■□□□□ 0.28
PRP43P53131 INM2YDR287W 879 nt16.76■□□□□ 0.27
PRP43P53131 LSM3YLR438C-A 270 nt16.76■□□□□ 0.27
PRP43P53131 YLR281CYLR281C 468 nt16.75■□□□□ 0.27
PRP43P53131 YBL100CYBL100C 315 nt16.75■□□□□ 0.27
PRP43P53131 DAL1YIR027C 1383 nt16.7■□□□□ 0.26
PRP43P53131 BSC6YOL137W 1494 nt16.69■□□□□ 0.26
PRP43P53131 WHI5YOR083W 888 nt16.69■□□□□ 0.26
PRP43P53131 FIS1YIL065C 468 nt16.62■□□□□ 0.25
PRP43P53131 TRM9YML014W 840 nt16.62■□□□□ 0.25
PRP43P53131 PHO4YFR034C 939 nt16.56■□□□□ 0.24
PRP43P53131 FUN26YAL022C 1554 nt16.55■□□□□ 0.24
PRP43P53131 MOT3YMR070W 1473 nt16.54■□□□□ 0.24
PRP43P53131 FMP45YDL222C 930 nt16.44■□□□□ 0.22
PRP43P53131 YPR011CYPR011C 981 nt16.43■□□□□ 0.22
PRP43P53131 YLR154C-GYLR154C-G 150 nt16.35■□□□□ 0.21
PRP43P53131 DSK2YMR276W 1122 nt16.35■□□□□ 0.21
PRP43P53131 YLR236CYLR236C 324 nt16.34■□□□□ 0.21
PRP43P53131 CCT6YDR188W 1641 nt16.32■□□□□ 0.2
PRP43P53131 ALF1YNL148C 765 nt16.27■□□□□ 0.2
PRP43P53131 YJL152WYJL152W 360 nt16.25■□□□□ 0.19
Retrieved 100 of 7,029 protein–RNA pairs in 73.3 ms