Protein–RNA interactions for Protein: P36000

APL2, AP-1 complex subunit beta-1, yeastyeast

Predicted RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APL2P36000 YML009W-BYML009W-B 477 nt25.52■■□□□ 1.68
APL2P36000 NSR1YGR159C 1245 nt25.06■■□□□ 1.6
APL2P36000 NOP1YDL014W 984 nt24.85■■□□□ 1.57
APL2P36000 YKL036CYKL036C 393 nt23.31■■□□□ 1.32
APL2P36000 MDJ1YFL016C 1536 nt22.02■■□□□ 1.12
APL2P36000 Q0297Q0297 156 nt21.95■■□□□ 1.1
APL2P36000 YJL027CYJL027C 417 nt21.82■■□□□ 1.08
APL2P36000 SRX1YKL086W 384 nt21.8■■□□□ 1.08
APL2P36000 SCS3YGL126W 1143 nt21.44■■□□□ 1.02
APL2P36000 YCR051WYCR051W 669 nt20.69■□□□□ 0.9
APL2P36000 YOL085CYOL085C 342 nt20.24■□□□□ 0.83
APL2P36000 PKP1YIL042C 1185 nt19.93■□□□□ 0.78
APL2P36000 RPP1BYDL130W 321 nt19.69■□□□□ 0.74
APL2P36000 DBP2YNL112W 1641 nt19.68■□□□□ 0.74
APL2P36000 TRN1tP(UGG)A 72 nt19.55■□□□□ 0.72
APL2P36000 SUF9tP(UGG)F 72 nt19.55■□□□□ 0.72
APL2P36000 SUF8tP(UGG)H 72 nt19.55■□□□□ 0.72
APL2P36000 tP(UGG)LtP(UGG)L 72 nt19.55■□□□□ 0.72
APL2P36000 SUF7tP(UGG)M 72 nt19.55■□□□□ 0.72
APL2P36000 tP(UGG)N1tP(UGG)N1 72 nt19.55■□□□□ 0.72
APL2P36000 tP(UGG)N2tP(UGG)N2 72 nt19.55■□□□□ 0.72
APL2P36000 tP(UGG)O1tP(UGG)O1 72 nt19.55■□□□□ 0.72
APL2P36000 SUF11tP(UGG)O2 72 nt19.55■□□□□ 0.72
APL2P36000 CCC1YLR220W 969 nt19.35■□□□□ 0.69
APL2P36000 SCJ1YMR214W 1134 nt19.31■□□□□ 0.68
APL2P36000 ATS1YAL020C 1002 nt19.26■□□□□ 0.67
APL2P36000 PET122YER153C 765 nt18.83■□□□□ 0.6
APL2P36000 YBR190WYBR190W 312 nt18.62■□□□□ 0.57
APL2P36000 tP(UGG)O3tP(UGG)O3 72 nt18.6■□□□□ 0.57
APL2P36000 SCR1SCR1 522 nt18.58■□□□□ 0.56
APL2P36000 RVS167YDR388W 1449 nt18.36■□□□□ 0.53
APL2P36000 RRN5YLR141W 1092 nt18.32■□□□□ 0.52
APL2P36000 RTC3YHR087W 336 nt18.2■□□□□ 0.5
APL2P36000 RSB1YOR049C 1065 nt17.98■□□□□ 0.47
APL2P36000 YER088W-BYER088W-B 147 nt17.96■□□□□ 0.47
APL2P36000 YDJ1YNL064C 1230 nt17.96■□□□□ 0.47
APL2P36000 SHR5YOL110W 714 nt17.88■□□□□ 0.45
APL2P36000 PST2YDR032C 597 nt17.81■□□□□ 0.44
APL2P36000 GAR1YHR089C 618 nt17.54■□□□□ 0.4
APL2P36000 DEP1YAL013W 1218 nt17.34■□□□□ 0.37
APL2P36000 URN1YPR152C 1398 nt17.2■□□□□ 0.34
APL2P36000 YKL097CYKL097C 411 nt17.2■□□□□ 0.34
APL2P36000 SHU1YHL006C 453 nt17.03■□□□□ 0.32
APL2P36000 YNL208WYNL208W 600 nt17.01■□□□□ 0.31
APL2P36000 TIR1YER011W 765 nt16.93■□□□□ 0.3
APL2P36000 RPN10YHR200W 807 nt16.9■□□□□ 0.3
APL2P36000 OPI9YLR338W 858 nt16.88■□□□□ 0.29
APL2P36000 SAH1YER043C 1350 nt16.73■□□□□ 0.27
APL2P36000 PUT4YOR348C 1884 nt16.73■□□□□ 0.27
APL2P36000 SSA1YAL005C 1929 nt16.72■□□□□ 0.27
APL2P36000 YAL037C-BYAL037C-B 975 nt16.7■□□□□ 0.26
APL2P36000 SRB2YHR041C 633 nt16.61■□□□□ 0.25
APL2P36000 YOR139CYOR139C 393 nt16.58■□□□□ 0.24
APL2P36000 ARE1YCR048W 1833 nt16.54■□□□□ 0.24
APL2P36000 YJR018WYJR018W 363 nt16.42■□□□□ 0.22
APL2P36000 YJR120WYJR120W 351 nt16.38■□□□□ 0.21
APL2P36000 PUN1YLR414C 792 nt16.34■□□□□ 0.21
APL2P36000 WWM1YFL010C 636 nt16.29■□□□□ 0.2
APL2P36000 YHR049C-AYHR049C-A 297 nt16.28■□□□□ 0.2
APL2P36000 MNP1YGL068W 585 nt16.23■□□□□ 0.19
APL2P36000 HOM6YJR139C 1080 nt16.23■□□□□ 0.19
APL2P36000 NPL3YDR432W 1245 nt16.22■□□□□ 0.19
APL2P36000 POA1YBR022W 534 nt16.22■□□□□ 0.19
APL2P36000 YGR021WYGR021W 873 nt16.16■□□□□ 0.18
APL2P36000 PTC2YER089C 1395 nt16.14■□□□□ 0.17
APL2P36000 RPP2BYDR382W 333 nt16.09■□□□□ 0.17
APL2P36000 SSA3YBL075C 1950 nt16.09■□□□□ 0.17
APL2P36000 RKM5YLR137W 1104 nt15.97■□□□□ 0.15
APL2P36000 YOL037CYOL037C 354 nt15.97■□□□□ 0.15
APL2P36000 YFL021C-AYFL021C-A 855 nt15.93■□□□□ 0.14
APL2P36000 BUD23YCR047C 828 nt15.91■□□□□ 0.14
APL2P36000 BDH2YAL061W 1254 nt15.9■□□□□ 0.14
APL2P36000 tM(CAU)CtM(CAU)C 72 nt15.89■□□□□ 0.13
APL2P36000 IMT4tM(CAU)E 72 nt15.89■□□□□ 0.13
APL2P36000 IMT3tM(CAU)J3 72 nt15.89■□□□□ 0.13
APL2P36000 IMT1tM(CAU)O1 72 nt15.89■□□□□ 0.13
APL2P36000 IMT2tM(CAU)P 72 nt15.89■□□□□ 0.13
APL2P36000 NAB2YGL122C 1578 nt15.84■□□□□ 0.13
APL2P36000 BSC6YOL137W 1494 nt15.79■□□□□ 0.12
APL2P36000 INM2YDR287W 879 nt15.75■□□□□ 0.11
APL2P36000 LSM3YLR438C-A 270 nt15.74■□□□□ 0.11
APL2P36000 FIS1YIL065C 468 nt15.73■□□□□ 0.11
APL2P36000 DAL1YIR027C 1383 nt15.72■□□□□ 0.11
APL2P36000 FPR4YLR449W 1179 nt15.69■□□□□ 0.1
APL2P36000 YBL100CYBL100C 315 nt15.69■□□□□ 0.1
APL2P36000 YLR281CYLR281C 468 nt15.66■□□□□ 0.1
APL2P36000 PUS2YGL063W 1113 nt15.62■□□□□ 0.09
APL2P36000 PHO4YFR034C 939 nt15.59■□□□□ 0.09
APL2P36000 WHI5YOR083W 888 nt15.56■□□□□ 0.08
APL2P36000 FUN26YAL022C 1554 nt15.53■□□□□ 0.08
APL2P36000 TRM9YML014W 840 nt15.52■□□□□ 0.08
APL2P36000 YPR011CYPR011C 981 nt15.4■□□□□ 0.06
APL2P36000 CCT6YDR188W 1641 nt15.38■□□□□ 0.05
APL2P36000 MOT3YMR070W 1473 nt15.37■□□□□ 0.05
APL2P36000 YLR154C-GYLR154C-G 150 nt15.28■□□□□ 0.04
APL2P36000 YLR236CYLR236C 324 nt15.28■□□□□ 0.04
APL2P36000 DSK2YMR276W 1122 nt15.24■□□□□ 0.03
APL2P36000 FMP45YDL222C 930 nt15.22■□□□□ 0.03
APL2P36000 YPS1YLR120C 1710 nt15.18■□□□□ 0.02
APL2P36000 ALF1YNL148C 765 nt15.16■□□□□ 0.02
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms