Protein–RNA interactions for Protein: P33299

RPT1, 26S proteasome regulatory subunit 7 homolog, yeastyeast

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT1P33299 YML009W-BYML009W-B 477 nt22.19■■□□□ 1.14
RPT1P33299 NSR1YGR159C 1245 nt21.75■■□□□ 1.07
RPT1P33299 NOP1YDL014W 984 nt21.61■■□□□ 1.05
RPT1P33299 YKL036CYKL036C 393 nt20.18■□□□□ 0.82
RPT1P33299 MDJ1YFL016C 1536 nt19.17■□□□□ 0.66
RPT1P33299 Q0297Q0297 156 nt18.97■□□□□ 0.63
RPT1P33299 YJL027CYJL027C 417 nt18.92■□□□□ 0.62
RPT1P33299 SRX1YKL086W 384 nt18.87■□□□□ 0.61
RPT1P33299 SCS3YGL126W 1143 nt18.5■□□□□ 0.55
RPT1P33299 YCR051WYCR051W 669 nt18■□□□□ 0.47
RPT1P33299 YOL085CYOL085C 342 nt17.47■□□□□ 0.39
RPT1P33299 PKP1YIL042C 1185 nt17.24■□□□□ 0.35
RPT1P33299 RPP1BYDL130W 321 nt17.05■□□□□ 0.32
RPT1P33299 DBP2YNL112W 1641 nt16.99■□□□□ 0.31
RPT1P33299 TRN1tP(UGG)A 72 nt16.93■□□□□ 0.3
RPT1P33299 SUF9tP(UGG)F 72 nt16.93■□□□□ 0.3
RPT1P33299 SUF8tP(UGG)H 72 nt16.93■□□□□ 0.3
RPT1P33299 tP(UGG)LtP(UGG)L 72 nt16.93■□□□□ 0.3
RPT1P33299 SUF7tP(UGG)M 72 nt16.93■□□□□ 0.3
RPT1P33299 tP(UGG)N1tP(UGG)N1 72 nt16.93■□□□□ 0.3
RPT1P33299 tP(UGG)N2tP(UGG)N2 72 nt16.93■□□□□ 0.3
RPT1P33299 tP(UGG)O1tP(UGG)O1 72 nt16.93■□□□□ 0.3
RPT1P33299 SUF11tP(UGG)O2 72 nt16.93■□□□□ 0.3
RPT1P33299 CCC1YLR220W 969 nt16.85■□□□□ 0.29
RPT1P33299 SCJ1YMR214W 1134 nt16.61■□□□□ 0.25
RPT1P33299 ATS1YAL020C 1002 nt16.6■□□□□ 0.25
RPT1P33299 PET122YER153C 765 nt16.29■□□□□ 0.2
RPT1P33299 YBR190WYBR190W 312 nt16.21■□□□□ 0.19
RPT1P33299 SCR1SCR1 522 nt16.18■□□□□ 0.18
RPT1P33299 tP(UGG)O3tP(UGG)O3 72 nt16.11■□□□□ 0.17
RPT1P33299 RVS167YDR388W 1449 nt16.08■□□□□ 0.16
RPT1P33299 RTC3YHR087W 336 nt15.95■□□□□ 0.14
RPT1P33299 RRN5YLR141W 1092 nt15.84■□□□□ 0.13
RPT1P33299 RSB1YOR049C 1065 nt15.62■□□□□ 0.09
RPT1P33299 YDJ1YNL064C 1230 nt15.55■□□□□ 0.08
RPT1P33299 SHR5YOL110W 714 nt15.55■□□□□ 0.08
RPT1P33299 YER088W-BYER088W-B 147 nt15.53■□□□□ 0.08
RPT1P33299 PST2YDR032C 597 nt15.31■□□□□ 0.04
RPT1P33299 GAR1YHR089C 618 nt15.24■□□□□ 0.03
RPT1P33299 Q0182Q0182 405 nt15.17■□□□□ 0.02
RPT1P33299 DEP1YAL013W 1218 nt15.11■□□□□ 0.01
RPT1P33299 URN1YPR152C 1398 nt14.99□□□□□ -0.01
RPT1P33299 YKL097CYKL097C 411 nt14.88□□□□□ -0.03
RPT1P33299 YNL208WYNL208W 600 nt14.83□□□□□ -0.04
RPT1P33299 MOT3YMR070W 1473 nt14.82□□□□□ -0.04
RPT1P33299 RPN10YHR200W 807 nt14.81□□□□□ -0.04
RPT1P33299 TIR1YER011W 765 nt14.68□□□□□ -0.06
RPT1P33299 OPI9YLR338W 858 nt14.68□□□□□ -0.06
RPT1P33299 SHU1YHL006C 453 nt14.67□□□□□ -0.06
RPT1P33299 SAH1YER043C 1350 nt14.57□□□□□ -0.08
RPT1P33299 PUT4YOR348C 1884 nt14.53□□□□□ -0.08
RPT1P33299 SSA1YAL005C 1929 nt14.45□□□□□ -0.1
RPT1P33299 YAL037C-BYAL037C-B 975 nt14.41□□□□□ -0.1
RPT1P33299 ARE1YCR048W 1833 nt14.36□□□□□ -0.11
RPT1P33299 YJR018WYJR018W 363 nt14.3□□□□□ -0.12
RPT1P33299 SRB2YHR041C 633 nt14.28□□□□□ -0.12
RPT1P33299 PUN1YLR414C 792 nt14.27□□□□□ -0.13
RPT1P33299 SSA3YBL075C 1950 nt14.27□□□□□ -0.13
RPT1P33299 YHR049C-AYHR049C-A 297 nt14.22□□□□□ -0.13
RPT1P33299 YOR139CYOR139C 393 nt14.22□□□□□ -0.13
RPT1P33299 POA1YBR022W 534 nt14.15□□□□□ -0.14
RPT1P33299 YJR120WYJR120W 351 nt14.12□□□□□ -0.15
RPT1P33299 WWM1YFL010C 636 nt14.1□□□□□ -0.15
RPT1P33299 RPP2BYDR382W 333 nt14.09□□□□□ -0.15
RPT1P33299 PTC2YER089C 1395 nt14.09□□□□□ -0.15
RPT1P33299 NPL3YDR432W 1245 nt14.08□□□□□ -0.16
RPT1P33299 YGR021WYGR021W 873 nt14.06□□□□□ -0.16
RPT1P33299 MNP1YGL068W 585 nt14.05□□□□□ -0.16
RPT1P33299 HOM6YJR139C 1080 nt14.02□□□□□ -0.17
RPT1P33299 BUD23YCR047C 828 nt13.94□□□□□ -0.18
RPT1P33299 YOL037CYOL037C 354 nt13.85□□□□□ -0.19
RPT1P33299 YFL021C-AYFL021C-A 855 nt13.83□□□□□ -0.2
RPT1P33299 BDH2YAL061W 1254 nt13.83□□□□□ -0.2
RPT1P33299 RKM5YLR137W 1104 nt13.83□□□□□ -0.2
RPT1P33299 NAB2YGL122C 1578 nt13.83□□□□□ -0.2
RPT1P33299 BSC6YOL137W 1494 nt13.79□□□□□ -0.2
RPT1P33299 FPR4YLR449W 1179 nt13.77□□□□□ -0.21
RPT1P33299 INM2YDR287W 879 nt13.73□□□□□ -0.21
RPT1P33299 DAL1YIR027C 1383 nt13.71□□□□□ -0.21
RPT1P33299 YBL100CYBL100C 315 nt13.69□□□□□ -0.22
RPT1P33299 FIS1YIL065C 468 nt13.68□□□□□ -0.22
RPT1P33299 LSM3YLR438C-A 270 nt13.66□□□□□ -0.22
RPT1P33299 tM(CAU)CtM(CAU)C 72 nt13.63□□□□□ -0.23
RPT1P33299 IMT4tM(CAU)E 72 nt13.63□□□□□ -0.23
RPT1P33299 IMT3tM(CAU)J3 72 nt13.63□□□□□ -0.23
RPT1P33299 IMT1tM(CAU)O1 72 nt13.63□□□□□ -0.23
RPT1P33299 IMT2tM(CAU)P 72 nt13.63□□□□□ -0.23
RPT1P33299 PHO4YFR034C 939 nt13.59□□□□□ -0.23
RPT1P33299 TRM9YML014W 840 nt13.54□□□□□ -0.24
RPT1P33299 FUN26YAL022C 1554 nt13.52□□□□□ -0.25
RPT1P33299 YLR281CYLR281C 468 nt13.51□□□□□ -0.25
RPT1P33299 PUS2YGL063W 1113 nt13.5□□□□□ -0.25
RPT1P33299 WHI5YOR083W 888 nt13.46□□□□□ -0.25
RPT1P33299 CCT6YDR188W 1641 nt13.36□□□□□ -0.27
RPT1P33299 ALF1YNL148C 765 nt13.31□□□□□ -0.28
RPT1P33299 SUF2tP(AGG)C 72 nt13.25□□□□□ -0.29
RPT1P33299 SUF10tP(AGG)N 72 nt13.25□□□□□ -0.29
RPT1P33299 YLR154C-GYLR154C-G 150 nt13.25□□□□□ -0.29
RPT1P33299 YPS1YLR120C 1710 nt13.21□□□□□ -0.3
RPT1P33299 DSK2YMR276W 1122 nt13.2□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms