Protein–RNA interactions for Protein: P47976

CTH1, mRNA decay factor CTH1, yeastyeast

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTH1P47976 YML009W-BYML009W-B 477 nt26.03■■□□□ 1.76
CTH1P47976 NOP1YDL014W 984 nt25.5■■□□□ 1.67
CTH1P47976 NSR1YGR159C 1245 nt25.04■■□□□ 1.6
CTH1P47976 YKL036CYKL036C 393 nt24.37■■□□□ 1.49
CTH1P47976 YJL027CYJL027C 417 nt22.93■■□□□ 1.26
CTH1P47976 SCS3YGL126W 1143 nt22.66■■□□□ 1.22
CTH1P47976 Q0297Q0297 156 nt22.63■■□□□ 1.21
CTH1P47976 SRX1YKL086W 384 nt22.34■■□□□ 1.17
CTH1P47976 MDJ1YFL016C 1536 nt21.62■■□□□ 1.05
CTH1P47976 YCR051WYCR051W 669 nt21.33■■□□□ 1.01
CTH1P47976 YOL085CYOL085C 342 nt21.12■□□□□ 0.97
CTH1P47976 SCJ1YMR214W 1134 nt20.94■□□□□ 0.94
CTH1P47976 PKP1YIL042C 1185 nt20.81■□□□□ 0.92
CTH1P47976 ATS1YAL020C 1002 nt20.47■□□□□ 0.87
CTH1P47976 RPP1BYDL130W 321 nt20.33■□□□□ 0.85
CTH1P47976 TRN1tP(UGG)A 72 nt19.74■□□□□ 0.75
CTH1P47976 SUF9tP(UGG)F 72 nt19.74■□□□□ 0.75
CTH1P47976 SUF8tP(UGG)H 72 nt19.74■□□□□ 0.75
CTH1P47976 tP(UGG)LtP(UGG)L 72 nt19.74■□□□□ 0.75
CTH1P47976 SUF7tP(UGG)M 72 nt19.74■□□□□ 0.75
CTH1P47976 tP(UGG)N1tP(UGG)N1 72 nt19.74■□□□□ 0.75
CTH1P47976 tP(UGG)N2tP(UGG)N2 72 nt19.74■□□□□ 0.75
CTH1P47976 tP(UGG)O1tP(UGG)O1 72 nt19.74■□□□□ 0.75
CTH1P47976 SUF11tP(UGG)O2 72 nt19.74■□□□□ 0.75
CTH1P47976 CCC1YLR220W 969 nt19.64■□□□□ 0.73
CTH1P47976 DBP2YNL112W 1641 nt19.43■□□□□ 0.7
CTH1P47976 PET122YER153C 765 nt19.4■□□□□ 0.7
CTH1P47976 SCR1SCR1 522 nt19.31■□□□□ 0.68
CTH1P47976 RTC3YHR087W 336 nt19.18■□□□□ 0.66
CTH1P47976 tP(UGG)O3tP(UGG)O3 72 nt18.97■□□□□ 0.63
CTH1P47976 RRN5YLR141W 1092 nt18.93■□□□□ 0.62
CTH1P47976 PST2YDR032C 597 nt18.82■□□□□ 0.6
CTH1P47976 RSB1YOR049C 1065 nt18.77■□□□□ 0.6
CTH1P47976 YER088W-BYER088W-B 147 nt18.55■□□□□ 0.56
CTH1P47976 YKL097CYKL097C 411 nt18.5■□□□□ 0.55
CTH1P47976 RVS167YDR388W 1449 nt18.33■□□□□ 0.53
CTH1P47976 YDJ1YNL064C 1230 nt18.26■□□□□ 0.51
CTH1P47976 YBR190WYBR190W 312 nt18.08■□□□□ 0.48
CTH1P47976 SHR5YOL110W 714 nt17.93■□□□□ 0.46
CTH1P47976 SHU1YHL006C 453 nt17.92■□□□□ 0.46
CTH1P47976 GAR1YHR089C 618 nt17.84■□□□□ 0.45
CTH1P47976 YOR139CYOR139C 393 nt17.68■□□□□ 0.42
CTH1P47976 YAL037C-BYAL037C-B 975 nt17.46■□□□□ 0.39
CTH1P47976 DEP1YAL013W 1218 nt17.29■□□□□ 0.36
CTH1P47976 NPL3YDR432W 1245 nt17.27■□□□□ 0.36
CTH1P47976 TIR1YER011W 765 nt17.16■□□□□ 0.34
CTH1P47976 YNL208WYNL208W 600 nt16.97■□□□□ 0.31
CTH1P47976 URN1YPR152C 1398 nt16.97■□□□□ 0.31
CTH1P47976 tM(CAU)CtM(CAU)C 72 nt16.9■□□□□ 0.3
CTH1P47976 IMT4tM(CAU)E 72 nt16.9■□□□□ 0.3
CTH1P47976 IMT3tM(CAU)J3 72 nt16.9■□□□□ 0.3
CTH1P47976 IMT1tM(CAU)O1 72 nt16.9■□□□□ 0.3
CTH1P47976 IMT2tM(CAU)P 72 nt16.9■□□□□ 0.3
CTH1P47976 SSA1YAL005C 1929 nt16.84■□□□□ 0.29
CTH1P47976 SRB2YHR041C 633 nt16.83■□□□□ 0.28
CTH1P47976 MNP1YGL068W 585 nt16.82■□□□□ 0.28
CTH1P47976 RPN10YHR200W 807 nt16.82■□□□□ 0.28
CTH1P47976 YOL037CYOL037C 354 nt16.71■□□□□ 0.27
CTH1P47976 HOM6YJR139C 1080 nt16.69■□□□□ 0.26
CTH1P47976 YGR021WYGR021W 873 nt16.62■□□□□ 0.25
CTH1P47976 WWM1YFL010C 636 nt16.61■□□□□ 0.25
CTH1P47976 MOT3YMR070W 1473 nt16.58■□□□□ 0.24
CTH1P47976 BSC6YOL137W 1494 nt16.54■□□□□ 0.24
CTH1P47976 OPI9YLR338W 858 nt16.51■□□□□ 0.23
CTH1P47976 PUS2YGL063W 1113 nt16.47■□□□□ 0.23
CTH1P47976 RKM5YLR137W 1104 nt16.45■□□□□ 0.22
CTH1P47976 YLR281CYLR281C 468 nt16.32■□□□□ 0.2
CTH1P47976 SAH1YER043C 1350 nt16.27■□□□□ 0.2
CTH1P47976 YJR120WYJR120W 351 nt16.24■□□□□ 0.19
CTH1P47976 YJR018WYJR018W 363 nt16.22■□□□□ 0.19
CTH1P47976 YFL021C-AYFL021C-A 855 nt16.21■□□□□ 0.19
CTH1P47976 SSA3YBL075C 1950 nt16.2■□□□□ 0.18
CTH1P47976 WHI5YOR083W 888 nt16.17■□□□□ 0.18
CTH1P47976 FMP45YDL222C 930 nt16.09■□□□□ 0.17
CTH1P47976 MRPL8YJL063C 717 nt16.09■□□□□ 0.17
CTH1P47976 UBX6YJL048C 1191 nt16.07■□□□□ 0.16
CTH1P47976 YPR011CYPR011C 981 nt16.07■□□□□ 0.16
CTH1P47976 PUT4YOR348C 1884 nt16.05■□□□□ 0.16
CTH1P47976 RPP2BYDR382W 333 nt16.05■□□□□ 0.16
CTH1P47976 PUN1YLR414C 792 nt16■□□□□ 0.15
CTH1P47976 YLR236CYLR236C 324 nt15.93■□□□□ 0.14
CTH1P47976 YCH1YGR203W 447 nt15.91■□□□□ 0.14
CTH1P47976 BDH2YAL061W 1254 nt15.9■□□□□ 0.14
CTH1P47976 DSK2YMR276W 1122 nt15.89■□□□□ 0.13
CTH1P47976 ARE1YCR048W 1833 nt15.84■□□□□ 0.13
CTH1P47976 ADO1YJR105W 1023 nt15.82■□□□□ 0.12
CTH1P47976 LSM3YLR438C-A 270 nt15.81■□□□□ 0.12
CTH1P47976 YEL076C-AYEL076C-A 651 nt15.76■□□□□ 0.11
CTH1P47976 YEL076CYEL076C 651 nt15.76■□□□□ 0.11
CTH1P47976 YLR464WYLR464W 651 nt15.76■□□□□ 0.11
CTH1P47976 PTC2YER089C 1395 nt15.75■□□□□ 0.11
CTH1P47976 SPP1YPL138C 1062 nt15.71■□□□□ 0.11
CTH1P47976 IMP2'YIL154C 1041 nt15.66■□□□□ 0.1
CTH1P47976 YHR049C-AYHR049C-A 297 nt15.64■□□□□ 0.09
CTH1P47976 RTG1YOL067C 534 nt15.63■□□□□ 0.09
CTH1P47976 LPX1YOR084W 1164 nt15.6■□□□□ 0.09
CTH1P47976 YLR154C-GYLR154C-G 150 nt15.57■□□□□ 0.08
CTH1P47976 SIS1YNL007C 1059 nt15.53■□□□□ 0.08
CTH1P47976 YBL100CYBL100C 315 nt15.53■□□□□ 0.08
CTH1P47976 POA1YBR022W 534 nt15.49■□□□□ 0.07
Retrieved 100 of 7,029 protein–RNA pairs in 120 ms