Protein–RNA interactions for Protein: P46677

TAF1, Transcription initiation factor TFIID subunit 1, yeastyeast

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TAF1P46677 YML009W-BYML009W-B 477 nt21.65■■□□□ 1.06
TAF1P46677 NSR1YGR159C 1245 nt21.26■□□□□ 0.99
TAF1P46677 NOP1YDL014W 984 nt21.19■□□□□ 0.98
TAF1P46677 YKL036CYKL036C 393 nt19.78■□□□□ 0.76
TAF1P46677 MDJ1YFL016C 1536 nt18.59■□□□□ 0.57
TAF1P46677 Q0297Q0297 156 nt18.58■□□□□ 0.56
TAF1P46677 YJL027CYJL027C 417 nt18.52■□□□□ 0.56
TAF1P46677 SRX1YKL086W 384 nt18.47■□□□□ 0.55
TAF1P46677 SCS3YGL126W 1143 nt18.1■□□□□ 0.49
TAF1P46677 YCR051WYCR051W 669 nt17.57■□□□□ 0.4
TAF1P46677 YOL085CYOL085C 342 nt17.09■□□□□ 0.33
TAF1P46677 PKP1YIL042C 1185 nt16.8■□□□□ 0.28
TAF1P46677 RPP1BYDL130W 321 nt16.69■□□□□ 0.26
TAF1P46677 TRN1tP(UGG)A 72 nt16.52■□□□□ 0.24
TAF1P46677 SUF9tP(UGG)F 72 nt16.52■□□□□ 0.24
TAF1P46677 SUF8tP(UGG)H 72 nt16.52■□□□□ 0.24
TAF1P46677 tP(UGG)LtP(UGG)L 72 nt16.52■□□□□ 0.24
TAF1P46677 SUF7tP(UGG)M 72 nt16.52■□□□□ 0.24
TAF1P46677 tP(UGG)N1tP(UGG)N1 72 nt16.52■□□□□ 0.24
TAF1P46677 tP(UGG)N2tP(UGG)N2 72 nt16.52■□□□□ 0.24
TAF1P46677 tP(UGG)O1tP(UGG)O1 72 nt16.52■□□□□ 0.24
TAF1P46677 SUF11tP(UGG)O2 72 nt16.52■□□□□ 0.24
TAF1P46677 DBP2YNL112W 1641 nt16.52■□□□□ 0.23
TAF1P46677 SCJ1YMR214W 1134 nt16.41■□□□□ 0.22
TAF1P46677 CCC1YLR220W 969 nt16.39■□□□□ 0.21
TAF1P46677 ATS1YAL020C 1002 nt16.27■□□□□ 0.2
TAF1P46677 PET122YER153C 765 nt15.89■□□□□ 0.13
TAF1P46677 SCR1SCR1 522 nt15.88■□□□□ 0.13
TAF1P46677 YBR190WYBR190W 312 nt15.81■□□□□ 0.12
TAF1P46677 tP(UGG)O3tP(UGG)O3 72 nt15.73■□□□□ 0.11
TAF1P46677 RVS167YDR388W 1449 nt15.73■□□□□ 0.11
TAF1P46677 RTC3YHR087W 336 nt15.51■□□□□ 0.07
TAF1P46677 RRN5YLR141W 1092 nt15.46■□□□□ 0.07
TAF1P46677 SSA3YBL075C 1950 nt15.4■□□□□ 0.06
TAF1P46677 RSB1YOR049C 1065 nt15.27■□□□□ 0.04
TAF1P46677 YDJ1YNL064C 1230 nt15.22■□□□□ 0.03
TAF1P46677 SHR5YOL110W 714 nt15.2■□□□□ 0.02
TAF1P46677 YER088W-BYER088W-B 147 nt15.15■□□□□ 0.02
TAF1P46677 PST2YDR032C 597 nt14.99□□□□□ -0.01
TAF1P46677 GAR1YHR089C 618 nt14.85□□□□□ -0.03
TAF1P46677 DEP1YAL013W 1218 nt14.65□□□□□ -0.06
TAF1P46677 PUT4YOR348C 1884 nt14.61□□□□□ -0.07
TAF1P46677 YKL097CYKL097C 411 nt14.61□□□□□ -0.07
TAF1P46677 URN1YPR152C 1398 nt14.6□□□□□ -0.07
TAF1P46677 RPN10YHR200W 807 nt14.51□□□□□ -0.09
TAF1P46677 YNL208WYNL208W 600 nt14.48□□□□□ -0.09
TAF1P46677 TIR1YER011W 765 nt14.33□□□□□ -0.12
TAF1P46677 SHU1YHL006C 453 nt14.32□□□□□ -0.12
TAF1P46677 OPI9YLR338W 858 nt14.31□□□□□ -0.12
TAF1P46677 ARE1YCR048W 1833 nt14.2□□□□□ -0.14
TAF1P46677 SAH1YER043C 1350 nt14.13□□□□□ -0.15
TAF1P46677 SSA1YAL005C 1929 nt14.06□□□□□ -0.16
TAF1P46677 POA1YBR022W 534 nt14.05□□□□□ -0.16
TAF1P46677 Q0182Q0182 405 nt14.04□□□□□ -0.16
TAF1P46677 YAL037C-BYAL037C-B 975 nt14.01□□□□□ -0.17
TAF1P46677 YHR049C-AYHR049C-A 297 nt13.95□□□□□ -0.18
TAF1P46677 YJR018WYJR018W 363 nt13.94□□□□□ -0.18
TAF1P46677 PUN1YLR414C 792 nt13.94□□□□□ -0.18
TAF1P46677 YOR139CYOR139C 393 nt13.9□□□□□ -0.18
TAF1P46677 BSC6YOL137W 1494 nt13.85□□□□□ -0.19
TAF1P46677 NPL3YDR432W 1245 nt13.82□□□□□ -0.2
TAF1P46677 SRB2YHR041C 633 nt13.81□□□□□ -0.2
TAF1P46677 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
TAF1P46677 YGR021WYGR021W 873 nt13.8□□□□□ -0.2
TAF1P46677 WWM1YFL010C 636 nt13.72□□□□□ -0.21
TAF1P46677 SPT5YML010W 3192 nt13.71□□□□□ -0.21
TAF1P46677 HOM6YJR139C 1080 nt13.7□□□□□ -0.22
TAF1P46677 YJR120WYJR120W 351 nt13.69□□□□□ -0.22
TAF1P46677 PTC2YER089C 1395 nt13.69□□□□□ -0.22
TAF1P46677 MNP1YGL068W 585 nt13.67□□□□□ -0.22
TAF1P46677 YOL037CYOL037C 354 nt13.61□□□□□ -0.23
TAF1P46677 BUD23YCR047C 828 nt13.54□□□□□ -0.24
TAF1P46677 YFL021C-AYFL021C-A 855 nt13.54□□□□□ -0.24
TAF1P46677 BDH2YAL061W 1254 nt13.51□□□□□ -0.25
TAF1P46677 RKM5YLR137W 1104 nt13.51□□□□□ -0.25
TAF1P46677 NAB2YGL122C 1578 nt13.49□□□□□ -0.25
TAF1P46677 INM2YDR287W 879 nt13.43□□□□□ -0.26
TAF1P46677 LSM3YLR438C-A 270 nt13.4□□□□□ -0.26
TAF1P46677 FPR4YLR449W 1179 nt13.37□□□□□ -0.27
TAF1P46677 DAL1YIR027C 1383 nt13.36□□□□□ -0.27
TAF1P46677 tM(CAU)CtM(CAU)C 72 nt13.35□□□□□ -0.27
TAF1P46677 IMT4tM(CAU)E 72 nt13.35□□□□□ -0.27
TAF1P46677 IMT3tM(CAU)J3 72 nt13.35□□□□□ -0.27
TAF1P46677 IMT1tM(CAU)O1 72 nt13.35□□□□□ -0.27
TAF1P46677 IMT2tM(CAU)P 72 nt13.35□□□□□ -0.27
TAF1P46677 YBL100CYBL100C 315 nt13.34□□□□□ -0.27
TAF1P46677 SSA4YER103W 1929 nt13.33□□□□□ -0.28
TAF1P46677 FIS1YIL065C 468 nt13.28□□□□□ -0.28
TAF1P46677 MOT3YMR070W 1473 nt13.25□□□□□ -0.29
TAF1P46677 FPS1YLL043W 2010 nt13.24□□□□□ -0.29
TAF1P46677 TRM9YML014W 840 nt13.24□□□□□ -0.29
TAF1P46677 PHO4YFR034C 939 nt13.22□□□□□ -0.29
TAF1P46677 YLR281CYLR281C 468 nt13.22□□□□□ -0.29
TAF1P46677 PUS2YGL063W 1113 nt13.2□□□□□ -0.3
TAF1P46677 FUN26YAL022C 1554 nt13.17□□□□□ -0.3
TAF1P46677 WHI5YOR083W 888 nt13.15□□□□□ -0.3
TAF1P46677 MEP2YNL142W 1500 nt13.08□□□□□ -0.32
TAF1P46677 PAC11YDR488C 1602 nt13.07□□□□□ -0.32
TAF1P46677 CCT6YDR188W 1641 nt13.05□□□□□ -0.32
TAF1P46677 ALF1YNL148C 765 nt12.99□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms