Protein–RNA interactions for Protein: P16521

YEF3, Elongation factor 3A, yeastyeast

Known RBP Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEF3P16521 YML009W-BYML009W-B 477 nt26.84■■□□□ 1.89
YEF3P16521 NSR1YGR159C 1245 nt26.45■■□□□ 1.82
YEF3P16521 NOP1YDL014W 984 nt26.19■■□□□ 1.78
YEF3P16521 YKL036CYKL036C 393 nt24.76■■□□□ 1.55
YEF3P16521 MDJ1YFL016C 1536 nt23.66■■□□□ 1.38
YEF3P16521 YJL027CYJL027C 417 nt23.29■■□□□ 1.32
YEF3P16521 Q0297Q0297 156 nt23.04■■□□□ 1.28
YEF3P16521 SCS3YGL126W 1143 nt22.82■■□□□ 1.24
YEF3P16521 SRX1YKL086W 384 nt22.81■■□□□ 1.24
YEF3P16521 YCR051WYCR051W 669 nt21.8■■□□□ 1.08
YEF3P16521 YOL085CYOL085C 342 nt21.4■■□□□ 1.02
YEF3P16521 SCJ1YMR214W 1134 nt21.08■□□□□ 0.97
YEF3P16521 PKP1YIL042C 1185 nt21.05■□□□□ 0.96
YEF3P16521 DBP2YNL112W 1641 nt20.96■□□□□ 0.95
YEF3P16521 RPP1BYDL130W 321 nt20.72■□□□□ 0.91
YEF3P16521 ATS1YAL020C 1002 nt20.64■□□□□ 0.89
YEF3P16521 TRN1tP(UGG)A 72 nt20.57■□□□□ 0.88
YEF3P16521 SUF9tP(UGG)F 72 nt20.57■□□□□ 0.88
YEF3P16521 SUF8tP(UGG)H 72 nt20.57■□□□□ 0.88
YEF3P16521 tP(UGG)LtP(UGG)L 72 nt20.57■□□□□ 0.88
YEF3P16521 SUF7tP(UGG)M 72 nt20.57■□□□□ 0.88
YEF3P16521 tP(UGG)N1tP(UGG)N1 72 nt20.57■□□□□ 0.88
YEF3P16521 tP(UGG)N2tP(UGG)N2 72 nt20.57■□□□□ 0.88
YEF3P16521 tP(UGG)O1tP(UGG)O1 72 nt20.57■□□□□ 0.88
YEF3P16521 SUF11tP(UGG)O2 72 nt20.57■□□□□ 0.88
YEF3P16521 CCC1YLR220W 969 nt20.46■□□□□ 0.87
YEF3P16521 YBR190WYBR190W 312 nt19.94■□□□□ 0.78
YEF3P16521 SCR1SCR1 522 nt19.78■□□□□ 0.76
YEF3P16521 PET122YER153C 765 nt19.69■□□□□ 0.74
YEF3P16521 RTC3YHR087W 336 nt19.59■□□□□ 0.73
YEF3P16521 tP(UGG)O3tP(UGG)O3 72 nt19.5■□□□□ 0.71
YEF3P16521 RVS167YDR388W 1449 nt19.47■□□□□ 0.71
YEF3P16521 RRN5YLR141W 1092 nt19.25■□□□□ 0.67
YEF3P16521 RSB1YOR049C 1065 nt19.1■□□□□ 0.65
YEF3P16521 PST2YDR032C 597 nt18.96■□□□□ 0.63
YEF3P16521 SHR5YOL110W 714 nt18.89■□□□□ 0.61
YEF3P16521 YER088W-BYER088W-B 147 nt18.84■□□□□ 0.61
YEF3P16521 YDJ1YNL064C 1230 nt18.76■□□□□ 0.59
YEF3P16521 YKL097CYKL097C 411 nt18.65■□□□□ 0.58
YEF3P16521 DEP1YAL013W 1218 nt18.52■□□□□ 0.56
YEF3P16521 GAR1YHR089C 618 nt18.48■□□□□ 0.55
YEF3P16521 URN1YPR152C 1398 nt18.39■□□□□ 0.53
YEF3P16521 PUT4YOR348C 1884 nt18.17■□□□□ 0.5
YEF3P16521 SHU1YHL006C 453 nt18.04■□□□□ 0.48
YEF3P16521 OPI9YLR338W 858 nt18.04■□□□□ 0.48
YEF3P16521 YNL208WYNL208W 600 nt18.04■□□□□ 0.48
YEF3P16521 SAH1YER043C 1350 nt18.03■□□□□ 0.48
YEF3P16521 RPN10YHR200W 807 nt17.94■□□□□ 0.46
YEF3P16521 ARE1YCR048W 1833 nt17.9■□□□□ 0.46
YEF3P16521 TIR1YER011W 765 nt17.8■□□□□ 0.44
YEF3P16521 YOR139CYOR139C 393 nt17.67■□□□□ 0.42
YEF3P16521 SSA1YAL005C 1929 nt17.66■□□□□ 0.42
YEF3P16521 YHR049C-AYHR049C-A 297 nt17.65■□□□□ 0.42
YEF3P16521 POA1YBR022W 534 nt17.65■□□□□ 0.42
YEF3P16521 YAL037C-BYAL037C-B 975 nt17.62■□□□□ 0.41
YEF3P16521 SRB2YHR041C 633 nt17.57■□□□□ 0.4
YEF3P16521 NPL3YDR432W 1245 nt17.51■□□□□ 0.39
YEF3P16521 YJR018WYJR018W 363 nt17.5■□□□□ 0.39
YEF3P16521 PUN1YLR414C 792 nt17.45■□□□□ 0.38
YEF3P16521 YJR120WYJR120W 351 nt17.43■□□□□ 0.38
YEF3P16521 PTC2YER089C 1395 nt17.36■□□□□ 0.37
YEF3P16521 BUD23YCR047C 828 nt17.25■□□□□ 0.35
YEF3P16521 BSC6YOL137W 1494 nt17.23■□□□□ 0.35
YEF3P16521 WWM1YFL010C 636 nt17.12■□□□□ 0.33
YEF3P16521 RPP2BYDR382W 333 nt17.07■□□□□ 0.32
YEF3P16521 YGR021WYGR021W 873 nt17.04■□□□□ 0.32
YEF3P16521 NAB2YGL122C 1578 nt17.02■□□□□ 0.31
YEF3P16521 MNP1YGL068W 585 nt16.99■□□□□ 0.31
YEF3P16521 YOL037CYOL037C 354 nt16.98■□□□□ 0.31
YEF3P16521 tM(CAU)CtM(CAU)C 72 nt16.97■□□□□ 0.31
YEF3P16521 IMT4tM(CAU)E 72 nt16.97■□□□□ 0.31
YEF3P16521 IMT3tM(CAU)J3 72 nt16.97■□□□□ 0.31
YEF3P16521 IMT1tM(CAU)O1 72 nt16.97■□□□□ 0.31
YEF3P16521 IMT2tM(CAU)P 72 nt16.97■□□□□ 0.31
YEF3P16521 HOM6YJR139C 1080 nt16.95■□□□□ 0.3
YEF3P16521 SSA3YBL075C 1950 nt16.93■□□□□ 0.3
YEF3P16521 FIS1YIL065C 468 nt16.92■□□□□ 0.3
YEF3P16521 FPR4YLR449W 1179 nt16.91■□□□□ 0.3
YEF3P16521 DAL1YIR027C 1383 nt16.84■□□□□ 0.29
YEF3P16521 BDH2YAL061W 1254 nt16.81■□□□□ 0.28
YEF3P16521 INM2YDR287W 879 nt16.76■□□□□ 0.27
YEF3P16521 PHO4YFR034C 939 nt16.74■□□□□ 0.27
YEF3P16521 YBL100CYBL100C 315 nt16.73■□□□□ 0.27
YEF3P16521 RKM5YLR137W 1104 nt16.72■□□□□ 0.27
YEF3P16521 PUS2YGL063W 1113 nt16.68■□□□□ 0.26
YEF3P16521 YFL021C-AYFL021C-A 855 nt16.67■□□□□ 0.26
YEF3P16521 MOT3YMR070W 1473 nt16.59■□□□□ 0.25
YEF3P16521 FUN26YAL022C 1554 nt16.55■□□□□ 0.24
YEF3P16521 YLR281CYLR281C 468 nt16.54■□□□□ 0.24
YEF3P16521 LSM3YLR438C-A 270 nt16.53■□□□□ 0.24
YEF3P16521 TRM9YML014W 840 nt16.46■□□□□ 0.23
YEF3P16521 WHI5YOR083W 888 nt16.42■□□□□ 0.22
YEF3P16521 YPS1YLR120C 1710 nt16.36■□□□□ 0.21
YEF3P16521 SPT5YML010W 3192 nt16.35■□□□□ 0.21
YEF3P16521 CCT6YDR188W 1641 nt16.3■□□□□ 0.2
YEF3P16521 YDR095CYDR095C 411 nt16.26■□□□□ 0.19
YEF3P16521 FMP45YDL222C 930 nt16.24■□□□□ 0.19
YEF3P16521 ALF1YNL148C 765 nt16.22■□□□□ 0.19
YEF3P16521 YHR165W-AYHR165W-A 312 nt16.18■□□□□ 0.18
YEF3P16521 MRPL8YJL063C 717 nt16.16■□□□□ 0.18
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms