RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeastyeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL4YPR029C PSE1P32337 1089 aaKnown RBP4.39□□□□□ -1.71
APL4YPR029C RTG3P38165 486 aa4.39□□□□□ -1.71
APL4YPR029C PES4P39684 611 aa4.39□□□□□ -1.71
APL4YPR029C NUP82P40368 713 aa4.39□□□□□ -1.71
APL4YPR029C MTR4P47047 1073 aaKnown RBP4.39□□□□□ -1.71
APL4YPR029C SRB7P47822 140 aa4.39□□□□□ -1.71
APL4YPR029C PHM6Q05637 104 aa4.39□□□□□ -1.71
APL4YPR029C MRX10Q05648 414 aa4.39□□□□□ -1.71
APL4YPR029C CFT2Q12102 859 aaPredicted RBP4.39□□□□□ -1.71
APL4YPR029C NYV1Q12255 253 aa4.39□□□□□ -1.71
APL4YPR029C TIM54P47045 478 aa4.38□□□□□ -1.71
APL4YPR029C MEP1P40260 492 aa4.38□□□□□ -1.71
APL4YPR029C BFA1P47113 574 aa4.38□□□□□ -1.71
APL4YPR029C RMD1Q03441 430 aa4.38□□□□□ -1.71
APL4YPR029C SPC19Q03954 165 aa4.38□□□□□ -1.71
APL4YPR029C MRM1P25270 412 aa4.37□□□□□ -1.71
APL4YPR029C SPT5P27692 1063 aaKnown RBP4.37□□□□□ -1.71
APL4YPR029C ANP1P32629 500 aa4.37□□□□□ -1.71
APL4YPR029C ECM23Q02710 187 aa4.37□□□□□ -1.71
APL4YPR029C PHO8P11491 566 aa4.37□□□□□ -1.71
APL4YPR029C RRN3P36070 627 aa4.37□□□□□ -1.71
APL4YPR029C RTF1P53064 558 aa4.37□□□□□ -1.71
APL4YPR029C ENV11P53246 860 aa4.37□□□□□ -1.71
APL4YPR029C HEL2Q05580 639 aaKnown RBP4.37□□□□□ -1.71
APL4YPR029C TYW1Q08960 810 aaKnown RBP4.37□□□□□ -1.71
APL4YPR029C ENO2P00925 437 aaKnown RBP4.36□□□□□ -1.71
APL4YPR029C STE5P32917 917 aa4.36□□□□□ -1.71
APL4YPR029C YKR023WP36119 530 aaKnown RBP4.36□□□□□ -1.71
APL4YPR029C IES5P40060 125 aa4.36□□□□□ -1.71
APL4YPR029C PEA2P40091 420 aa4.36□□□□□ -1.71
APL4YPR029C YSH1Q06224 779 aaPredicted RBP4.36□□□□□ -1.71
APL4YPR029C YLR352WQ06479 807 aa4.36□□□□□ -1.71
APL4YPR029C YLR125WQ12138 136 aa4.36□□□□□ -1.71
APL4YPR029C CEX1Q12453 761 aa4.36□□□□□ -1.71
APL4YPR029C HAA1Q12753 694 aaKnown RBP4.36□□□□□ -1.71
APL4YPR029C MPH2P0CD99 609 aa4.36□□□□□ -1.71
APL4YPR029C MPH3P0CE00 602 aa4.36□□□□□ -1.71
APL4YPR029C APL2P36000 726 aaPredicted RBP4.36□□□□□ -1.71
APL4YPR029C APE4P38821 490 aa4.36□□□□□ -1.71
APL4YPR029C FYV10P40492 516 aa4.36□□□□□ -1.71
APL4YPR029C VIP1Q06685 1146 aaKnown RBP4.36□□□□□ -1.71
APL4YPR029C SGT2Q12118 346 aaKnown RBP4.36□□□□□ -1.71
APL4YPR029C CLF1Q12309 687 aaPredicted RBP4.36□□□□□ -1.71
APL4YPR029C GFD2P25370 566 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C SSH4P32343 579 aa4.35□□□□□ -1.71
APL4YPR029C PEX5P35056 612 aa4.35□□□□□ -1.71
APL4YPR029C BOI1P38041 980 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C VPS29P38759 282 aa4.35□□□□□ -1.71
APL4YPR029C DOT6P40059 670 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C TEA1P47988 759 aa4.35□□□□□ -1.71
APL4YPR029C TSR2Q06672 205 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C NOP14Q99207 810 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C HAP4P14064 554 aa4.35□□□□□ -1.71
APL4YPR029C MSM1P22438 575 aa4.35□□□□□ -1.71
APL4YPR029C RIM21P48565 533 aa4.35□□□□□ -1.71
APL4YPR029C HUL5P53119 910 aa4.35□□□□□ -1.71
APL4YPR029C CWC15Q03772 175 aaKnown RBP4.35□□□□□ -1.71
APL4YPR029C NUT2Q06213 157 aa4.35□□□□□ -1.71
APL4YPR029C RAD59Q12223 238 aa4.35□□□□□ -1.71
APL4YPR029C KRR1P25586 316 aaPredicted RBP4.34□□□□□ -1.71
APL4YPR029C UBX7P38349 436 aa4.34□□□□□ -1.71
APL4YPR029C YHR218WP38899 603 aa4.34□□□□□ -1.71
APL4YPR029C CHZ1P40019 153 aaPredicted RBP4.34□□□□□ -1.71
APL4YPR029C YNL058CP53947 316 aa4.34□□□□□ -1.71
APL4YPR029C YEF3P16521 1044 aaKnown RBP4.34□□□□□ -1.72
APL4YPR029C MEF1P25039 761 aa4.34□□□□□ -1.72
APL4YPR029C MET4P32389 672 aa4.34□□□□□ -1.72
APL4YPR029C HIR1P32479 840 aa4.34□□□□□ -1.72
APL4YPR029C MRS6P32864 603 aaKnown RBP4.34□□□□□ -1.72
APL4YPR029C YNR029CP53729 429 aaKnown RBP4.34□□□□□ -1.72
APL4YPR029C CWC24P53769 259 aa4.34□□□□□ -1.72
APL4YPR029C VTI1Q04338 217 aa4.34□□□□□ -1.72
APL4YPR029C RRP9Q06506 573 aaKnown RBP4.34□□□□□ -1.72
APL4YPR029C SAC3P46674 1301 aa4.34□□□□□ -1.72
APL4YPR029C SPT7P35177 1332 aa4.33□□□□□ -1.72
APL4YPR029C CDC60P26637 1090 aaKnown RBP4.33□□□□□ -1.72
APL4YPR029C THI4P32318 326 aa4.33□□□□□ -1.72
APL4YPR029C PEP12P32854 288 aa4.33□□□□□ -1.72
APL4YPR029C CAJ1P39101 391 aa4.33□□□□□ -1.72
APL4YPR029C ACF4P47129 309 aa4.33□□□□□ -1.72
APL4YPR029C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
APL4YPR029C IRC3Q06683 689 aa4.33□□□□□ -1.72
APL4YPR029C PPM2Q08282 695 aa4.33□□□□□ -1.72
APL4YPR029C CDC31P06704 161 aaKnown RBP4.33□□□□□ -1.72
APL4YPR029C TOM70P07213 617 aaKnown RBP4.33□□□□□ -1.72
APL4YPR029C VPH1P32563 840 aaKnown RBP4.33□□□□□ -1.72
APL4YPR029C PEX6P33760 1030 aa4.33□□□□□ -1.72
APL4YPR029C YKL222CP35995 705 aa4.33□□□□□ -1.72
APL4YPR029C YPP1P46951 817 aa4.33□□□□□ -1.72
APL4YPR029C BNI5P53890 448 aaKnown RBP4.33□□□□□ -1.72
APL4YPR029C UBX4P54730 416 aa4.33□□□□□ -1.72
APL4YPR029C PGI1P12709 554 aaKnown RBP4.32□□□□□ -1.72
APL4YPR029C RAD51P25454 400 aa4.32□□□□□ -1.72
APL4YPR029C TIM23P32897 222 aa4.32□□□□□ -1.72
APL4YPR029C PTH2P34222 208 aa4.32□□□□□ -1.72
APL4YPR029C MNR2P35724 969 aa4.32□□□□□ -1.72
APL4YPR029C YKL050CP35736 922 aa4.32□□□□□ -1.72
APL4YPR029C TPS3P38426 1054 aaKnown RBP4.32□□□□□ -1.72
APL4YPR029C PKH3Q03306 898 aaPredicted RBP4.32□□□□□ -1.72
APL4YPR029C APC5Q08683 685 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms