Protein–RNA interactions for Protein: P48565

RIM21, pH-response regulator protein palH/RIM21, yeastyeast

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM21P48565 YML009W-BYML009W-B 477 nt19.57■□□□□ 0.72
RIM21P48565 NSR1YGR159C 1245 nt19.23■□□□□ 0.67
RIM21P48565 NOP1YDL014W 984 nt19.11■□□□□ 0.65
RIM21P48565 YKL036CYKL036C 393 nt17.86■□□□□ 0.45
RIM21P48565 MDJ1YFL016C 1536 nt16.86■□□□□ 0.29
RIM21P48565 Q0297Q0297 156 nt16.81■□□□□ 0.28
RIM21P48565 YJL027CYJL027C 417 nt16.71■□□□□ 0.27
RIM21P48565 SRX1YKL086W 384 nt16.7■□□□□ 0.26
RIM21P48565 SCS3YGL126W 1143 nt16.38■□□□□ 0.21
RIM21P48565 Q0182Q0182 405 nt15.87■□□□□ 0.13
RIM21P48565 YCR051WYCR051W 669 nt15.86■□□□□ 0.13
RIM21P48565 MOT3YMR070W 1473 nt15.69■□□□□ 0.1
RIM21P48565 YOL085CYOL085C 342 nt15.46■□□□□ 0.07
RIM21P48565 PKP1YIL042C 1185 nt15.2■□□□□ 0.02
RIM21P48565 RPP1BYDL130W 321 nt15.08■□□□□ 0
RIM21P48565 DBP2YNL112W 1641 nt15.01□□□□□ -0.01
RIM21P48565 TRN1tP(UGG)A 72 nt14.97□□□□□ -0.01
RIM21P48565 SUF9tP(UGG)F 72 nt14.97□□□□□ -0.01
RIM21P48565 SUF8tP(UGG)H 72 nt14.97□□□□□ -0.01
RIM21P48565 tP(UGG)LtP(UGG)L 72 nt14.97□□□□□ -0.01
RIM21P48565 SUF7tP(UGG)M 72 nt14.97□□□□□ -0.01
RIM21P48565 tP(UGG)N1tP(UGG)N1 72 nt14.97□□□□□ -0.01
RIM21P48565 tP(UGG)N2tP(UGG)N2 72 nt14.97□□□□□ -0.01
RIM21P48565 tP(UGG)O1tP(UGG)O1 72 nt14.97□□□□□ -0.01
RIM21P48565 SUF11tP(UGG)O2 72 nt14.97□□□□□ -0.01
RIM21P48565 CCC1YLR220W 969 nt14.82□□□□□ -0.04
RIM21P48565 SCJ1YMR214W 1134 nt14.8□□□□□ -0.04
RIM21P48565 ATS1YAL020C 1002 nt14.71□□□□□ -0.05
RIM21P48565 PET122YER153C 765 nt14.38□□□□□ -0.11
RIM21P48565 YBR190WYBR190W 312 nt14.31□□□□□ -0.12
RIM21P48565 SCR1SCR1 522 nt14.3□□□□□ -0.12
RIM21P48565 tP(UGG)O3tP(UGG)O3 72 nt14.23□□□□□ -0.13
RIM21P48565 SSA3YBL075C 1950 nt14.22□□□□□ -0.13
RIM21P48565 RVS167YDR388W 1449 nt14.17□□□□□ -0.14
RIM21P48565 RTC3YHR087W 336 nt14.01□□□□□ -0.17
RIM21P48565 RRN5YLR141W 1092 nt14□□□□□ -0.17
RIM21P48565 YDJ1YNL064C 1230 nt13.77□□□□□ -0.21
RIM21P48565 RSB1YOR049C 1065 nt13.77□□□□□ -0.21
RIM21P48565 NME1NME1 340 nt13.75□□□□□ -0.21
RIM21P48565 SHR5YOL110W 714 nt13.73□□□□□ -0.21
RIM21P48565 YER088W-BYER088W-B 147 nt13.72□□□□□ -0.21
RIM21P48565 YGR139WYGR139W 339 nt13.62□□□□□ -0.23
RIM21P48565 PST2YDR032C 597 nt13.58□□□□□ -0.24
RIM21P48565 GAR1YHR089C 618 nt13.43□□□□□ -0.26
RIM21P48565 PUT4YOR348C 1884 nt13.43□□□□□ -0.26
RIM21P48565 DEP1YAL013W 1218 nt13.26□□□□□ -0.29
RIM21P48565 URN1YPR152C 1398 nt13.2□□□□□ -0.3
RIM21P48565 YKL097CYKL097C 411 nt13.17□□□□□ -0.3
RIM21P48565 YNL208WYNL208W 600 nt13.08□□□□□ -0.32
RIM21P48565 RPN10YHR200W 807 nt13.06□□□□□ -0.32
RIM21P48565 POA1YBR022W 534 nt13.02□□□□□ -0.33
RIM21P48565 ARE1YCR048W 1833 nt12.99□□□□□ -0.33
RIM21P48565 SHU1YHL006C 453 nt12.98□□□□□ -0.33
RIM21P48565 TIR1YER011W 765 nt12.96□□□□□ -0.33
RIM21P48565 OPI9YLR338W 858 nt12.96□□□□□ -0.33
RIM21P48565 YHR049C-AYHR049C-A 297 nt12.87□□□□□ -0.35
RIM21P48565 BSC6YOL137W 1494 nt12.85□□□□□ -0.35
RIM21P48565 SAH1YER043C 1350 nt12.83□□□□□ -0.36
RIM21P48565 SSA1YAL005C 1929 nt12.76□□□□□ -0.37
RIM21P48565 YAL037C-BYAL037C-B 975 nt12.7□□□□□ -0.38
RIM21P48565 SPT5YML010W 3192 nt12.65□□□□□ -0.39
RIM21P48565 CSM2YIL132C 642 nt12.64□□□□□ -0.39
RIM21P48565 SSA4YER103W 1929 nt12.61□□□□□ -0.39
RIM21P48565 YJR018WYJR018W 363 nt12.61□□□□□ -0.39
RIM21P48565 YOR139CYOR139C 393 nt12.61□□□□□ -0.39
RIM21P48565 SRB2YHR041C 633 nt12.59□□□□□ -0.39
RIM21P48565 PUN1YLR414C 792 nt12.59□□□□□ -0.39
RIM21P48565 BUD23YCR047C 828 nt12.57□□□□□ -0.4
RIM21P48565 YJR120WYJR120W 351 nt12.47□□□□□ -0.41
RIM21P48565 NPL3YDR432W 1245 nt12.44□□□□□ -0.42
RIM21P48565 WWM1YFL010C 636 nt12.44□□□□□ -0.42
RIM21P48565 YGR021WYGR021W 873 nt12.44□□□□□ -0.42
RIM21P48565 RPP2BYDR382W 333 nt12.42□□□□□ -0.42
RIM21P48565 HOM6YJR139C 1080 nt12.4□□□□□ -0.42
RIM21P48565 PTC2YER089C 1395 nt12.4□□□□□ -0.42
RIM21P48565 MNP1YGL068W 585 nt12.38□□□□□ -0.43
RIM21P48565 FPS1YLL043W 2010 nt12.35□□□□□ -0.43
RIM21P48565 NVJ2YPR091C 2313 nt12.32□□□□□ -0.44
RIM21P48565 YOL037CYOL037C 354 nt12.27□□□□□ -0.45
RIM21P48565 PAU21YOR394W 495 nt12.25□□□□□ -0.45
RIM21P48565 PAU22YPL282C 495 nt12.25□□□□□ -0.45
RIM21P48565 YFL021C-AYFL021C-A 855 nt12.23□□□□□ -0.45
RIM21P48565 BDH2YAL061W 1254 nt12.22□□□□□ -0.45
RIM21P48565 RKM5YLR137W 1104 nt12.22□□□□□ -0.45
RIM21P48565 NAB2YGL122C 1578 nt12.22□□□□□ -0.45
RIM21P48565 PAC11YDR488C 1602 nt12.18□□□□□ -0.46
RIM21P48565 BDF1YLR399C 2061 nt12.15□□□□□ -0.46
RIM21P48565 INM2YDR287W 879 nt12.13□□□□□ -0.47
RIM21P48565 ARO7YPR060C 771 nt12.12□□□□□ -0.47
RIM21P48565 LSM3YLR438C-A 270 nt12.11□□□□□ -0.47
RIM21P48565 DAL1YIR027C 1383 nt12.09□□□□□ -0.47
RIM21P48565 tM(CAU)CtM(CAU)C 72 nt12.09□□□□□ -0.47
RIM21P48565 IMT4tM(CAU)E 72 nt12.09□□□□□ -0.47
RIM21P48565 IMT3tM(CAU)J3 72 nt12.09□□□□□ -0.47
RIM21P48565 IMT1tM(CAU)O1 72 nt12.09□□□□□ -0.47
RIM21P48565 IMT2tM(CAU)P 72 nt12.09□□□□□ -0.47
RIM21P48565 MEP2YNL142W 1500 nt12.09□□□□□ -0.47
RIM21P48565 MET8YBR213W 825 nt12.07□□□□□ -0.48
RIM21P48565 FIS1YIL065C 468 nt12.06□□□□□ -0.48
RIM21P48565 FPR4YLR449W 1179 nt12.06□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms