Protein–RNA interactions for Protein: Q06506

RRP9, Ribosomal RNA-processing protein 9, yeastyeast

Known RBP Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP9Q06506 NSR1YGR159C 1245 nt18.16■□□□□ 0.5
RRP9Q06506 YML009W-BYML009W-B 477 nt18.1■□□□□ 0.49
RRP9Q06506 NOP1YDL014W 984 nt17.46■□□□□ 0.39
RRP9Q06506 MDJ1YFL016C 1536 nt16.39■□□□□ 0.21
RRP9Q06506 YKL036CYKL036C 393 nt15.93■□□□□ 0.14
RRP9Q06506 SRX1YKL086W 384 nt15.29■□□□□ 0.04
RRP9Q06506 Q0297Q0297 156 nt15.25■□□□□ 0.03
RRP9Q06506 SSA3YBL075C 1950 nt15.18■□□□□ 0.02
RRP9Q06506 YJL027CYJL027C 417 nt15.06■□□□□ 0
RRP9Q06506 YCR051WYCR051W 669 nt14.46□□□□□ -0.09
RRP9Q06506 DBP2YNL112W 1641 nt14.42□□□□□ -0.1
RRP9Q06506 SCS3YGL126W 1143 nt14.41□□□□□ -0.1
RRP9Q06506 TRN1tP(UGG)A 72 nt14□□□□□ -0.17
RRP9Q06506 SUF9tP(UGG)F 72 nt14□□□□□ -0.17
RRP9Q06506 SUF8tP(UGG)H 72 nt14□□□□□ -0.17
RRP9Q06506 tP(UGG)LtP(UGG)L 72 nt14□□□□□ -0.17
RRP9Q06506 SUF7tP(UGG)M 72 nt14□□□□□ -0.17
RRP9Q06506 tP(UGG)N1tP(UGG)N1 72 nt14□□□□□ -0.17
RRP9Q06506 tP(UGG)N2tP(UGG)N2 72 nt14□□□□□ -0.17
RRP9Q06506 tP(UGG)O1tP(UGG)O1 72 nt14□□□□□ -0.17
RRP9Q06506 SUF11tP(UGG)O2 72 nt14□□□□□ -0.17
RRP9Q06506 YBR190WYBR190W 312 nt14□□□□□ -0.17
RRP9Q06506 YOL085CYOL085C 342 nt13.82□□□□□ -0.2
RRP9Q06506 CCC1YLR220W 969 nt13.79□□□□□ -0.2
RRP9Q06506 RPP1BYDL130W 321 nt13.68□□□□□ -0.22
RRP9Q06506 RTC3YHR087W 336 nt13.64□□□□□ -0.23
RRP9Q06506 PKP1YIL042C 1185 nt13.63□□□□□ -0.23
RRP9Q06506 RVS167YDR388W 1449 nt13.45□□□□□ -0.26
RRP9Q06506 SCJ1YMR214W 1134 nt13.43□□□□□ -0.26
RRP9Q06506 PET122YER153C 765 nt13.13□□□□□ -0.31
RRP9Q06506 tP(UGG)O3tP(UGG)O3 72 nt13.13□□□□□ -0.31
RRP9Q06506 PUT4YOR348C 1884 nt13.07□□□□□ -0.32
RRP9Q06506 NVJ2YPR091C 2313 nt13.06□□□□□ -0.32
RRP9Q06506 SSA1YAL005C 1929 nt13.03□□□□□ -0.32
RRP9Q06506 Q0182Q0182 405 nt13.01□□□□□ -0.33
RRP9Q06506 PAC11YDR488C 1602 nt12.98□□□□□ -0.33
RRP9Q06506 FPS1YLL043W 2010 nt12.98□□□□□ -0.33
RRP9Q06506 SHR5YOL110W 714 nt12.96□□□□□ -0.33
RRP9Q06506 SCR1SCR1 522 nt12.86□□□□□ -0.35
RRP9Q06506 ATS1YAL020C 1002 nt12.8□□□□□ -0.36
RRP9Q06506 URN1YPR152C 1398 nt12.73□□□□□ -0.37
RRP9Q06506 YDJ1YNL064C 1230 nt12.71□□□□□ -0.37
RRP9Q06506 RRN5YLR141W 1092 nt12.68□□□□□ -0.38
RRP9Q06506 DEP1YAL013W 1218 nt12.65□□□□□ -0.38
RRP9Q06506 SSA4YER103W 1929 nt12.64□□□□□ -0.39
RRP9Q06506 ARE1YCR048W 1833 nt12.62□□□□□ -0.39
RRP9Q06506 POA1YBR022W 534 nt12.6□□□□□ -0.39
RRP9Q06506 OPI9YLR338W 858 nt12.59□□□□□ -0.39
RRP9Q06506 SAH1YER043C 1350 nt12.56□□□□□ -0.4
RRP9Q06506 BSC6YOL137W 1494 nt12.49□□□□□ -0.41
RRP9Q06506 YHR049C-AYHR049C-A 297 nt12.48□□□□□ -0.41
RRP9Q06506 RPN10YHR200W 807 nt12.47□□□□□ -0.41
RRP9Q06506 GAR1YHR089C 618 nt12.45□□□□□ -0.42
RRP9Q06506 YER088W-BYER088W-B 147 nt12.44□□□□□ -0.42
RRP9Q06506 YNL208WYNL208W 600 nt12.43□□□□□ -0.42
RRP9Q06506 BDF1YLR399C 2061 nt12.42□□□□□ -0.42
RRP9Q06506 SPT5YML010W 3192 nt12.41□□□□□ -0.42
RRP9Q06506 RSB1YOR049C 1065 nt12.35□□□□□ -0.43
RRP9Q06506 PUN1YLR414C 792 nt12.22□□□□□ -0.45
RRP9Q06506 TAT1YBR069C 1860 nt12.21□□□□□ -0.46
RRP9Q06506 BUD23YCR047C 828 nt12.12□□□□□ -0.47
RRP9Q06506 YJR018WYJR018W 363 nt12.11□□□□□ -0.47
RRP9Q06506 PTC2YER089C 1395 nt12.1□□□□□ -0.47
RRP9Q06506 TIR1YER011W 765 nt12.05□□□□□ -0.48
RRP9Q06506 UME6YDR207C 2511 nt12.04□□□□□ -0.48
RRP9Q06506 MOT3YMR070W 1473 nt12.02□□□□□ -0.49
RRP9Q06506 YJR120WYJR120W 351 nt11.97□□□□□ -0.49
RRP9Q06506 NAB2YGL122C 1578 nt11.96□□□□□ -0.49
RRP9Q06506 PST2YDR032C 597 nt11.89□□□□□ -0.51
RRP9Q06506 FIS1YIL065C 468 nt11.86□□□□□ -0.51
RRP9Q06506 MEP2YNL142W 1500 nt11.8□□□□□ -0.52
RRP9Q06506 RPP2BYDR382W 333 nt11.79□□□□□ -0.52
RRP9Q06506 DAL1YIR027C 1383 nt11.79□□□□□ -0.52
RRP9Q06506 SRB2YHR041C 633 nt11.78□□□□□ -0.52
RRP9Q06506 FPR4YLR449W 1179 nt11.72□□□□□ -0.53
RRP9Q06506 PHO4YFR034C 939 nt11.7□□□□□ -0.54
RRP9Q06506 INM2YDR287W 879 nt11.68□□□□□ -0.54
RRP9Q06506 YBL100CYBL100C 315 nt11.58□□□□□ -0.56
RRP9Q06506 DCW1YKL046C 1350 nt11.56□□□□□ -0.56
RRP9Q06506 BDH2YAL061W 1254 nt11.55□□□□□ -0.56
RRP9Q06506 YPS1YLR120C 1710 nt11.54□□□□□ -0.56
RRP9Q06506 RPM1RPM1 483 nt11.51□□□□□ -0.57
RRP9Q06506 WWM1YFL010C 636 nt11.48□□□□□ -0.57
RRP9Q06506 SHU1YHL006C 453 nt11.48□□□□□ -0.57
RRP9Q06506 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
RRP9Q06506 YMR090WYMR090W 684 nt11.46□□□□□ -0.57
RRP9Q06506 YBR220CYBR220C 1683 nt11.44□□□□□ -0.58
RRP9Q06506 YHR165W-AYHR165W-A 312 nt11.44□□□□□ -0.58
RRP9Q06506 FUN26YAL022C 1554 nt11.43□□□□□ -0.58
RRP9Q06506 EMI2YDR516C 1503 nt11.42□□□□□ -0.58
RRP9Q06506 GUT2YIL155C 1950 nt11.38□□□□□ -0.59
RRP9Q06506 YGR021WYGR021W 873 nt11.35□□□□□ -0.59
RRP9Q06506 YAL037C-BYAL037C-B 975 nt11.35□□□□□ -0.59
RRP9Q06506 HOM6YJR139C 1080 nt11.33□□□□□ -0.6
RRP9Q06506 LSM3YLR438C-A 270 nt11.33□□□□□ -0.6
RRP9Q06506 TRM9YML014W 840 nt11.32□□□□□ -0.6
RRP9Q06506 YFL021C-AYFL021C-A 855 nt11.31□□□□□ -0.6
RRP9Q06506 YKL097CYKL097C 411 nt11.3□□□□□ -0.6
RRP9Q06506 MCH5YOR306C 1566 nt11.29□□□□□ -0.6
RRP9Q06506 YDL221WYDL221W 552 nt11.29□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms