Protein–RNA interactions for Protein: Q06224

YSH1, Endoribonuclease YSH1, yeastyeast

Predicted RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSH1Q06224 YML009W-BYML009W-B 477 nt20.89■□□□□ 0.93
YSH1Q06224 NSR1YGR159C 1245 nt20.57■□□□□ 0.88
YSH1Q06224 NOP1YDL014W 984 nt20.43■□□□□ 0.86
YSH1Q06224 YKL036CYKL036C 393 nt19.03■□□□□ 0.64
YSH1Q06224 MDJ1YFL016C 1536 nt18.41■□□□□ 0.54
YSH1Q06224 Q0297Q0297 156 nt17.92■□□□□ 0.46
YSH1Q06224 SRX1YKL086W 384 nt17.82■□□□□ 0.44
YSH1Q06224 YJL027CYJL027C 417 nt17.81■□□□□ 0.44
YSH1Q06224 SCS3YGL126W 1143 nt17.4■□□□□ 0.38
YSH1Q06224 YCR051WYCR051W 669 nt16.95■□□□□ 0.3
YSH1Q06224 YOL085CYOL085C 342 nt16.46■□□□□ 0.23
YSH1Q06224 SSA3YBL075C 1950 nt16.23■□□□□ 0.19
YSH1Q06224 DBP2YNL112W 1641 nt16.23■□□□□ 0.19
YSH1Q06224 PKP1YIL042C 1185 nt16.18■□□□□ 0.18
YSH1Q06224 RPP1BYDL130W 321 nt16.08■□□□□ 0.16
YSH1Q06224 TRN1tP(UGG)A 72 nt15.96■□□□□ 0.15
YSH1Q06224 SUF9tP(UGG)F 72 nt15.96■□□□□ 0.15
YSH1Q06224 SUF8tP(UGG)H 72 nt15.96■□□□□ 0.15
YSH1Q06224 tP(UGG)LtP(UGG)L 72 nt15.96■□□□□ 0.15
YSH1Q06224 SUF7tP(UGG)M 72 nt15.96■□□□□ 0.15
YSH1Q06224 tP(UGG)N1tP(UGG)N1 72 nt15.96■□□□□ 0.15
YSH1Q06224 tP(UGG)N2tP(UGG)N2 72 nt15.96■□□□□ 0.15
YSH1Q06224 tP(UGG)O1tP(UGG)O1 72 nt15.96■□□□□ 0.15
YSH1Q06224 SUF11tP(UGG)O2 72 nt15.96■□□□□ 0.15
YSH1Q06224 CCC1YLR220W 969 nt15.83■□□□□ 0.12
YSH1Q06224 YBR190WYBR190W 312 nt15.8■□□□□ 0.12
YSH1Q06224 SCJ1YMR214W 1134 nt15.72■□□□□ 0.11
YSH1Q06224 ATS1YAL020C 1002 nt15.64■□□□□ 0.09
YSH1Q06224 RTC3YHR087W 336 nt15.37■□□□□ 0.05
YSH1Q06224 PET122YER153C 765 nt15.32■□□□□ 0.04
YSH1Q06224 SCR1SCR1 522 nt15.27■□□□□ 0.04
YSH1Q06224 RVS167YDR388W 1449 nt15.18■□□□□ 0.02
YSH1Q06224 tP(UGG)O3tP(UGG)O3 72 nt15.18■□□□□ 0.02
YSH1Q06224 RRN5YLR141W 1092 nt14.92□□□□□ -0.02
YSH1Q06224 YDJ1YNL064C 1230 nt14.7□□□□□ -0.06
YSH1Q06224 RSB1YOR049C 1065 nt14.69□□□□□ -0.06
YSH1Q06224 SHR5YOL110W 714 nt14.68□□□□□ -0.06
YSH1Q06224 YER088W-BYER088W-B 147 nt14.62□□□□□ -0.07
YSH1Q06224 PUT4YOR348C 1884 nt14.59□□□□□ -0.07
YSH1Q06224 PST2YDR032C 597 nt14.44□□□□□ -0.1
YSH1Q06224 GAR1YHR089C 618 nt14.34□□□□□ -0.11
YSH1Q06224 URN1YPR152C 1398 nt14.32□□□□□ -0.12
YSH1Q06224 ARE1YCR048W 1833 nt14.23□□□□□ -0.13
YSH1Q06224 DEP1YAL013W 1218 nt14.2□□□□□ -0.14
YSH1Q06224 OPI9YLR338W 858 nt14.2□□□□□ -0.14
YSH1Q06224 SAH1YER043C 1350 nt14.16□□□□□ -0.14
YSH1Q06224 POA1YBR022W 534 nt14.06□□□□□ -0.16
YSH1Q06224 RPN10YHR200W 807 nt14.03□□□□□ -0.16
YSH1Q06224 YHR049C-AYHR049C-A 297 nt14.02□□□□□ -0.17
YSH1Q06224 YKL097CYKL097C 411 nt14.01□□□□□ -0.17
YSH1Q06224 YNL208WYNL208W 600 nt14□□□□□ -0.17
YSH1Q06224 NVJ2YPR091C 2313 nt13.92□□□□□ -0.18
YSH1Q06224 PAC11YDR488C 1602 nt13.92□□□□□ -0.18
YSH1Q06224 TIR1YER011W 765 nt13.84□□□□□ -0.19
YSH1Q06224 FPS1YLL043W 2010 nt13.84□□□□□ -0.19
YSH1Q06224 BSC6YOL137W 1494 nt13.83□□□□□ -0.2
YSH1Q06224 SHU1YHL006C 453 nt13.79□□□□□ -0.2
YSH1Q06224 PUN1YLR414C 792 nt13.77□□□□□ -0.21
YSH1Q06224 SSA1YAL005C 1929 nt13.65□□□□□ -0.22
YSH1Q06224 YJR018WYJR018W 363 nt13.65□□□□□ -0.22
YSH1Q06224 PTC2YER089C 1395 nt13.63□□□□□ -0.23
YSH1Q06224 BUD23YCR047C 828 nt13.63□□□□□ -0.23
YSH1Q06224 YAL037C-BYAL037C-B 975 nt13.52□□□□□ -0.25
YSH1Q06224 NAB2YGL122C 1578 nt13.51□□□□□ -0.25
YSH1Q06224 SSA4YER103W 1929 nt13.5□□□□□ -0.25
YSH1Q06224 SPT5YML010W 3192 nt13.49□□□□□ -0.25
YSH1Q06224 YJR120WYJR120W 351 nt13.44□□□□□ -0.26
YSH1Q06224 SRB2YHR041C 633 nt13.37□□□□□ -0.27
YSH1Q06224 YOR139CYOR139C 393 nt13.36□□□□□ -0.27
YSH1Q06224 FIS1YIL065C 468 nt13.33□□□□□ -0.28
YSH1Q06224 RPP2BYDR382W 333 nt13.32□□□□□ -0.28
YSH1Q06224 YGR021WYGR021W 873 nt13.28□□□□□ -0.28
YSH1Q06224 DAL1YIR027C 1383 nt13.27□□□□□ -0.29
YSH1Q06224 NPL3YDR432W 1245 nt13.26□□□□□ -0.29
YSH1Q06224 WWM1YFL010C 636 nt13.26□□□□□ -0.29
YSH1Q06224 HOM6YJR139C 1080 nt13.21□□□□□ -0.29
YSH1Q06224 BDF1YLR399C 2061 nt13.2□□□□□ -0.3
YSH1Q06224 INM2YDR287W 879 nt13.2□□□□□ -0.3
YSH1Q06224 MNP1YGL068W 585 nt13.17□□□□□ -0.3
YSH1Q06224 FPR4YLR449W 1179 nt13.17□□□□□ -0.3
YSH1Q06224 PHO4YFR034C 939 nt13.16□□□□□ -0.3
YSH1Q06224 YOL037CYOL037C 354 nt13.08□□□□□ -0.32
YSH1Q06224 YFL021C-AYFL021C-A 855 nt13.06□□□□□ -0.32
YSH1Q06224 BDH2YAL061W 1254 nt13.06□□□□□ -0.32
YSH1Q06224 RKM5YLR137W 1104 nt13.03□□□□□ -0.32
YSH1Q06224 YBL100CYBL100C 315 nt13.03□□□□□ -0.32
YSH1Q06224 MEP2YNL142W 1500 nt13.03□□□□□ -0.32
YSH1Q06224 YPS1YLR120C 1710 nt13.02□□□□□ -0.32
YSH1Q06224 TAT1YBR069C 1860 nt12.99□□□□□ -0.33
YSH1Q06224 LSM3YLR438C-A 270 nt12.94□□□□□ -0.34
YSH1Q06224 YDR095CYDR095C 411 nt12.9□□□□□ -0.34
YSH1Q06224 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
YSH1Q06224 tM(CAU)CtM(CAU)C 72 nt12.85□□□□□ -0.35
YSH1Q06224 IMT4tM(CAU)E 72 nt12.85□□□□□ -0.35
YSH1Q06224 IMT3tM(CAU)J3 72 nt12.85□□□□□ -0.35
YSH1Q06224 IMT1tM(CAU)O1 72 nt12.85□□□□□ -0.35
YSH1Q06224 IMT2tM(CAU)P 72 nt12.85□□□□□ -0.35
YSH1Q06224 YHR165W-AYHR165W-A 312 nt12.84□□□□□ -0.35
YSH1Q06224 DCW1YKL046C 1350 nt12.81□□□□□ -0.36
YSH1Q06224 UME6YDR207C 2511 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms