Protein–RNA interactions for Protein: P40368

NUP82, Nucleoporin NUP82, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP82P40368 YML009W-BYML009W-B 477 nt22.73■■□□□ 1.23
NUP82P40368 NSR1YGR159C 1245 nt22.51■■□□□ 1.19
NUP82P40368 NOP1YDL014W 984 nt22.06■■□□□ 1.12
NUP82P40368 YKL036CYKL036C 393 nt20.38■□□□□ 0.85
NUP82P40368 MDJ1YFL016C 1536 nt20.02■□□□□ 0.8
NUP82P40368 Q0297Q0297 156 nt19.27■□□□□ 0.68
NUP82P40368 SRX1YKL086W 384 nt19.26■□□□□ 0.67
NUP82P40368 YJL027CYJL027C 417 nt19.05■□□□□ 0.64
NUP82P40368 SCS3YGL126W 1143 nt18.54■□□□□ 0.56
NUP82P40368 YCR051WYCR051W 669 nt18.35■□□□□ 0.53
NUP82P40368 DBP2YNL112W 1641 nt17.66■□□□□ 0.42
NUP82P40368 YOL085CYOL085C 342 nt17.64■□□□□ 0.41
NUP82P40368 PKP1YIL042C 1185 nt17.44■□□□□ 0.38
NUP82P40368 TRN1tP(UGG)A 72 nt17.39■□□□□ 0.37
NUP82P40368 SUF9tP(UGG)F 72 nt17.39■□□□□ 0.37
NUP82P40368 SUF8tP(UGG)H 72 nt17.39■□□□□ 0.37
NUP82P40368 tP(UGG)LtP(UGG)L 72 nt17.39■□□□□ 0.37
NUP82P40368 SUF7tP(UGG)M 72 nt17.39■□□□□ 0.37
NUP82P40368 tP(UGG)N1tP(UGG)N1 72 nt17.39■□□□□ 0.37
NUP82P40368 tP(UGG)N2tP(UGG)N2 72 nt17.39■□□□□ 0.37
NUP82P40368 tP(UGG)O1tP(UGG)O1 72 nt17.39■□□□□ 0.37
NUP82P40368 SUF11tP(UGG)O2 72 nt17.39■□□□□ 0.37
NUP82P40368 RPP1BYDL130W 321 nt17.32■□□□□ 0.36
NUP82P40368 CCC1YLR220W 969 nt17.32■□□□□ 0.36
NUP82P40368 YBR190WYBR190W 312 nt17.02■□□□□ 0.32
NUP82P40368 RTC3YHR087W 336 nt16.73■□□□□ 0.27
NUP82P40368 RVS167YDR388W 1449 nt16.66■□□□□ 0.26
NUP82P40368 ATS1YAL020C 1002 nt16.58■□□□□ 0.24
NUP82P40368 PET122YER153C 765 nt16.57■□□□□ 0.24
NUP82P40368 SCJ1YMR214W 1134 nt16.56■□□□□ 0.24
NUP82P40368 tP(UGG)O3tP(UGG)O3 72 nt16.49■□□□□ 0.23
NUP82P40368 SCR1SCR1 522 nt16.41■□□□□ 0.22
NUP82P40368 RRN5YLR141W 1092 nt16.11■□□□□ 0.17
NUP82P40368 SHR5YOL110W 714 nt16.06■□□□□ 0.16
NUP82P40368 YDJ1YNL064C 1230 nt15.91■□□□□ 0.14
NUP82P40368 RSB1YOR049C 1065 nt15.8■□□□□ 0.12
NUP82P40368 YER088W-BYER088W-B 147 nt15.77■□□□□ 0.12
NUP82P40368 DEP1YAL013W 1218 nt15.68■□□□□ 0.1
NUP82P40368 URN1YPR152C 1398 nt15.63■□□□□ 0.09
NUP82P40368 GAR1YHR089C 618 nt15.63■□□□□ 0.09
NUP82P40368 PUT4YOR348C 1884 nt15.42■□□□□ 0.06
NUP82P40368 RPN10YHR200W 807 nt15.39■□□□□ 0.05
NUP82P40368 YNL208WYNL208W 600 nt15.37■□□□□ 0.05
NUP82P40368 OPI9YLR338W 858 nt15.36■□□□□ 0.05
NUP82P40368 PST2YDR032C 597 nt15.34■□□□□ 0.05
NUP82P40368 SAH1YER043C 1350 nt15.3■□□□□ 0.04
NUP82P40368 ARE1YCR048W 1833 nt15.17■□□□□ 0.02
NUP82P40368 TIR1YER011W 765 nt15.08■□□□□ 0
NUP82P40368 POA1YBR022W 534 nt15.02■□□□□ -0
NUP82P40368 YHR049C-AYHR049C-A 297 nt15.01□□□□□ -0.01
NUP82P40368 Q0182Q0182 405 nt15□□□□□ -0.01
NUP82P40368 PUN1YLR414C 792 nt14.92□□□□□ -0.02
NUP82P40368 YJR018WYJR018W 363 nt14.91□□□□□ -0.02
NUP82P40368 SSA1YAL005C 1929 nt14.88□□□□□ -0.03
NUP82P40368 YKL097CYKL097C 411 nt14.78□□□□□ -0.04
NUP82P40368 PTC2YER089C 1395 nt14.77□□□□□ -0.04
NUP82P40368 SHU1YHL006C 453 nt14.74□□□□□ -0.05
NUP82P40368 BUD23YCR047C 828 nt14.72□□□□□ -0.05
NUP82P40368 BSC6YOL137W 1494 nt14.65□□□□□ -0.06
NUP82P40368 SRB2YHR041C 633 nt14.64□□□□□ -0.07
NUP82P40368 YJR120WYJR120W 351 nt14.63□□□□□ -0.07
NUP82P40368 RPP2BYDR382W 333 nt14.62□□□□□ -0.07
NUP82P40368 YAL037C-BYAL037C-B 975 nt14.57□□□□□ -0.08
NUP82P40368 NAB2YGL122C 1578 nt14.55□□□□□ -0.08
NUP82P40368 MOT3YMR070W 1473 nt14.5□□□□□ -0.09
NUP82P40368 WWM1YFL010C 636 nt14.43□□□□□ -0.1
NUP82P40368 FPR4YLR449W 1179 nt14.42□□□□□ -0.1
NUP82P40368 DAL1YIR027C 1383 nt14.36□□□□□ -0.11
NUP82P40368 INM2YDR287W 879 nt14.36□□□□□ -0.11
NUP82P40368 FIS1YIL065C 468 nt14.32□□□□□ -0.12
NUP82P40368 YGR021WYGR021W 873 nt14.31□□□□□ -0.12
NUP82P40368 BDH2YAL061W 1254 nt14.3□□□□□ -0.12
NUP82P40368 SSA3YBL075C 1950 nt14.27□□□□□ -0.13
NUP82P40368 HOM6YJR139C 1080 nt14.26□□□□□ -0.13
NUP82P40368 YBL100CYBL100C 315 nt14.25□□□□□ -0.13
NUP82P40368 MNP1YGL068W 585 nt14.24□□□□□ -0.13
NUP82P40368 PHO4YFR034C 939 nt14.23□□□□□ -0.13
NUP82P40368 YOR139CYOR139C 393 nt14.16□□□□□ -0.14
NUP82P40368 YFL021C-AYFL021C-A 855 nt14.15□□□□□ -0.14
NUP82P40368 LSM3YLR438C-A 270 nt14.11□□□□□ -0.15
NUP82P40368 NPL3YDR432W 1245 nt14.07□□□□□ -0.16
NUP82P40368 RKM5YLR137W 1104 nt14.07□□□□□ -0.16
NUP82P40368 TRM9YML014W 840 nt14.07□□□□□ -0.16
NUP82P40368 FUN26YAL022C 1554 nt14.06□□□□□ -0.16
NUP82P40368 YOL037CYOL037C 354 nt13.96□□□□□ -0.17
NUP82P40368 YPS1YLR120C 1710 nt13.93□□□□□ -0.18
NUP82P40368 ALF1YNL148C 765 nt13.9□□□□□ -0.18
NUP82P40368 CCT6YDR188W 1641 nt13.86□□□□□ -0.19
NUP82P40368 YDR095CYDR095C 411 nt13.83□□□□□ -0.2
NUP82P40368 YHR165W-AYHR165W-A 312 nt13.83□□□□□ -0.2
NUP82P40368 SPT5YML010W 3192 nt13.8□□□□□ -0.2
NUP82P40368 SUF2tP(AGG)C 72 nt13.78□□□□□ -0.2
NUP82P40368 SUF10tP(AGG)N 72 nt13.78□□□□□ -0.2
NUP82P40368 MEP2YNL142W 1500 nt13.73□□□□□ -0.21
NUP82P40368 YLR281CYLR281C 468 nt13.65□□□□□ -0.22
NUP82P40368 WHI5YOR083W 888 nt13.63□□□□□ -0.23
NUP82P40368 SIS1YNL007C 1059 nt13.62□□□□□ -0.23
NUP82P40368 tM(CAU)CtM(CAU)C 72 nt13.61□□□□□ -0.23
NUP82P40368 IMT4tM(CAU)E 72 nt13.61□□□□□ -0.23
NUP82P40368 IMT3tM(CAU)J3 72 nt13.61□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms