Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 YML009W-BYML009W-B 477 nt20.3■□□□□ 0.84
YNL058CP53947 NSR1YGR159C 1245 nt20.29■□□□□ 0.84
YNL058CP53947 NOP1YDL014W 984 nt19.59■□□□□ 0.73
YNL058CP53947 MDJ1YFL016C 1536 nt18.35■□□□□ 0.53
YNL058CP53947 YKL036CYKL036C 393 nt17.77■□□□□ 0.44
YNL058CP53947 SRX1YKL086W 384 nt17.03■□□□□ 0.32
YNL058CP53947 YJL027CYJL027C 417 nt16.96■□□□□ 0.31
YNL058CP53947 Q0297Q0297 156 nt16.93■□□□□ 0.3
YNL058CP53947 YCR051WYCR051W 669 nt16.26■□□□□ 0.19
YNL058CP53947 SCS3YGL126W 1143 nt15.98■□□□□ 0.15
YNL058CP53947 DBP2YNL112W 1641 nt15.97■□□□□ 0.15
YNL058CP53947 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
YNL058CP53947 TRN1tP(UGG)A 72 nt15.55■□□□□ 0.08
YNL058CP53947 SUF9tP(UGG)F 72 nt15.55■□□□□ 0.08
YNL058CP53947 SUF8tP(UGG)H 72 nt15.55■□□□□ 0.08
YNL058CP53947 tP(UGG)LtP(UGG)L 72 nt15.55■□□□□ 0.08
YNL058CP53947 SUF7tP(UGG)M 72 nt15.55■□□□□ 0.08
YNL058CP53947 tP(UGG)N1tP(UGG)N1 72 nt15.55■□□□□ 0.08
YNL058CP53947 tP(UGG)N2tP(UGG)N2 72 nt15.55■□□□□ 0.08
YNL058CP53947 tP(UGG)O1tP(UGG)O1 72 nt15.55■□□□□ 0.08
YNL058CP53947 SUF11tP(UGG)O2 72 nt15.55■□□□□ 0.08
YNL058CP53947 CCC1YLR220W 969 nt15.55■□□□□ 0.08
YNL058CP53947 RTC3YHR087W 336 nt15.47■□□□□ 0.07
YNL058CP53947 YOL085CYOL085C 342 nt15.35■□□□□ 0.05
YNL058CP53947 PKP1YIL042C 1185 nt15.24■□□□□ 0.03
YNL058CP53947 RPP1BYDL130W 321 nt15.23■□□□□ 0.03
YNL058CP53947 RVS167YDR388W 1449 nt15.17■□□□□ 0.02
YNL058CP53947 SCJ1YMR214W 1134 nt14.89□□□□□ -0.03
YNL058CP53947 SSA3YBL075C 1950 nt14.69□□□□□ -0.06
YNL058CP53947 tP(UGG)O3tP(UGG)O3 72 nt14.64□□□□□ -0.07
YNL058CP53947 PET122YER153C 765 nt14.61□□□□□ -0.07
YNL058CP53947 SHR5YOL110W 714 nt14.48□□□□□ -0.09
YNL058CP53947 SCR1SCR1 522 nt14.46□□□□□ -0.09
YNL058CP53947 PUT4YOR348C 1884 nt14.38□□□□□ -0.11
YNL058CP53947 URN1YPR152C 1398 nt14.29□□□□□ -0.12
YNL058CP53947 DEP1YAL013W 1218 nt14.25□□□□□ -0.13
YNL058CP53947 ATS1YAL020C 1002 nt14.19□□□□□ -0.14
YNL058CP53947 RRN5YLR141W 1092 nt14.16□□□□□ -0.14
YNL058CP53947 YDJ1YNL064C 1230 nt14.14□□□□□ -0.15
YNL058CP53947 SAH1YER043C 1350 nt14.1□□□□□ -0.15
YNL058CP53947 RPN10YHR200W 807 nt14.08□□□□□ -0.16
YNL058CP53947 OPI9YLR338W 858 nt14.08□□□□□ -0.16
YNL058CP53947 ARE1YCR048W 1833 nt14.04□□□□□ -0.16
YNL058CP53947 POA1YBR022W 534 nt14.01□□□□□ -0.17
YNL058CP53947 YHR049C-AYHR049C-A 297 nt13.99□□□□□ -0.17
YNL058CP53947 GAR1YHR089C 618 nt13.98□□□□□ -0.17
YNL058CP53947 YNL208WYNL208W 600 nt13.94□□□□□ -0.18
YNL058CP53947 RSB1YOR049C 1065 nt13.87□□□□□ -0.19
YNL058CP53947 YER088W-BYER088W-B 147 nt13.84□□□□□ -0.19
YNL058CP53947 BSC6YOL137W 1494 nt13.74□□□□□ -0.21
YNL058CP53947 BUD23YCR047C 828 nt13.73□□□□□ -0.21
YNL058CP53947 PUN1YLR414C 792 nt13.73□□□□□ -0.21
YNL058CP53947 PTC2YER089C 1395 nt13.61□□□□□ -0.23
YNL058CP53947 YJR018WYJR018W 363 nt13.61□□□□□ -0.23
YNL058CP53947 TIR1YER011W 765 nt13.47□□□□□ -0.25
YNL058CP53947 NAB2YGL122C 1578 nt13.44□□□□□ -0.26
YNL058CP53947 RPP2BYDR382W 333 nt13.34□□□□□ -0.27
YNL058CP53947 FPR4YLR449W 1179 nt13.33□□□□□ -0.28
YNL058CP53947 SSA1YAL005C 1929 nt13.31□□□□□ -0.28
YNL058CP53947 DAL1YIR027C 1383 nt13.21□□□□□ -0.29
YNL058CP53947 YJR120WYJR120W 351 nt13.18□□□□□ -0.3
YNL058CP53947 FIS1YIL065C 468 nt13.17□□□□□ -0.3
YNL058CP53947 INM2YDR287W 879 nt13.15□□□□□ -0.3
YNL058CP53947 PST2YDR032C 597 nt13.13□□□□□ -0.31
YNL058CP53947 PHO4YFR034C 939 nt13.1□□□□□ -0.31
YNL058CP53947 SPT5YML010W 3192 nt13.1□□□□□ -0.31
YNL058CP53947 YBL100CYBL100C 315 nt13.01□□□□□ -0.33
YNL058CP53947 SRB2YHR041C 633 nt12.96□□□□□ -0.33
YNL058CP53947 BDH2YAL061W 1254 nt12.92□□□□□ -0.34
YNL058CP53947 YHR165W-AYHR165W-A 312 nt12.9□□□□□ -0.34
YNL058CP53947 SSA4YER103W 1929 nt12.9□□□□□ -0.35
YNL058CP53947 MEP2YNL142W 1500 nt12.88□□□□□ -0.35
YNL058CP53947 YPS1YLR120C 1710 nt12.88□□□□□ -0.35
YNL058CP53947 FPS1YLL043W 2010 nt12.87□□□□□ -0.35
YNL058CP53947 Q0182Q0182 405 nt12.86□□□□□ -0.35
YNL058CP53947 WWM1YFL010C 636 nt12.83□□□□□ -0.36
YNL058CP53947 FUN26YAL022C 1554 nt12.81□□□□□ -0.36
YNL058CP53947 ALF1YNL148C 765 nt12.81□□□□□ -0.36
YNL058CP53947 TRM9YML014W 840 nt12.79□□□□□ -0.36
YNL058CP53947 YDR095CYDR095C 411 nt12.77□□□□□ -0.37
YNL058CP53947 SHU1YHL006C 453 nt12.72□□□□□ -0.37
YNL058CP53947 DCW1YKL046C 1350 nt12.69□□□□□ -0.38
YNL058CP53947 YGR021WYGR021W 873 nt12.69□□□□□ -0.38
YNL058CP53947 YAL037C-BYAL037C-B 975 nt12.67□□□□□ -0.38
YNL058CP53947 LSM3YLR438C-A 270 nt12.67□□□□□ -0.38
YNL058CP53947 YFL021C-AYFL021C-A 855 nt12.61□□□□□ -0.39
YNL058CP53947 SUF2tP(AGG)C 72 nt12.6□□□□□ -0.39
YNL058CP53947 SUF10tP(AGG)N 72 nt12.6□□□□□ -0.39
YNL058CP53947 YKL097CYKL097C 411 nt12.6□□□□□ -0.39
YNL058CP53947 YMR090WYMR090W 684 nt12.58□□□□□ -0.4
YNL058CP53947 CCT6YDR188W 1641 nt12.57□□□□□ -0.4
YNL058CP53947 BDF1YLR399C 2061 nt12.57□□□□□ -0.4
YNL058CP53947 RPP2AYOL039W 321 nt12.56□□□□□ -0.4
YNL058CP53947 HOM6YJR139C 1080 nt12.55□□□□□ -0.4
YNL058CP53947 EMI2YDR516C 1503 nt12.55□□□□□ -0.4
YNL058CP53947 MNP1YGL068W 585 nt12.52□□□□□ -0.41
YNL058CP53947 NVJ2YPR091C 2313 nt12.48□□□□□ -0.41
YNL058CP53947 PTP1YDL230W 1008 nt12.43□□□□□ -0.42
YNL058CP53947 SIS1YNL007C 1059 nt12.43□□□□□ -0.42
YNL058CP53947 CAC2YML102W 1407 nt12.42□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms