Protein–RNA interactions for Protein: P47129

ACF4, Assembly-complementing factor 4, yeastyeast

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ACF4P47129 YML009W-BYML009W-B 477 nt22.49■■□□□ 1.19
ACF4P47129 NSR1YGR159C 1245 nt22.18■■□□□ 1.14
ACF4P47129 NOP1YDL014W 984 nt21.99■■□□□ 1.11
ACF4P47129 YKL036CYKL036C 393 nt20.54■□□□□ 0.88
ACF4P47129 MDJ1YFL016C 1536 nt19.41■□□□□ 0.7
ACF4P47129 Q0297Q0297 156 nt19.38■□□□□ 0.69
ACF4P47129 SRX1YKL086W 384 nt19.24■□□□□ 0.67
ACF4P47129 YJL027CYJL027C 417 nt19.2■□□□□ 0.66
ACF4P47129 SCS3YGL126W 1143 nt18.83■□□□□ 0.6
ACF4P47129 YCR051WYCR051W 669 nt18.22■□□□□ 0.51
ACF4P47129 YOL085CYOL085C 342 nt17.8■□□□□ 0.44
ACF4P47129 PKP1YIL042C 1185 nt17.46■□□□□ 0.39
ACF4P47129 RPP1BYDL130W 321 nt17.37■□□□□ 0.37
ACF4P47129 DBP2YNL112W 1641 nt17.33■□□□□ 0.37
ACF4P47129 TRN1tP(UGG)A 72 nt17.24■□□□□ 0.35
ACF4P47129 SUF9tP(UGG)F 72 nt17.24■□□□□ 0.35
ACF4P47129 SUF8tP(UGG)H 72 nt17.24■□□□□ 0.35
ACF4P47129 tP(UGG)LtP(UGG)L 72 nt17.24■□□□□ 0.35
ACF4P47129 SUF7tP(UGG)M 72 nt17.24■□□□□ 0.35
ACF4P47129 tP(UGG)N1tP(UGG)N1 72 nt17.24■□□□□ 0.35
ACF4P47129 tP(UGG)N2tP(UGG)N2 72 nt17.24■□□□□ 0.35
ACF4P47129 tP(UGG)O1tP(UGG)O1 72 nt17.24■□□□□ 0.35
ACF4P47129 SUF11tP(UGG)O2 72 nt17.24■□□□□ 0.35
ACF4P47129 SCJ1YMR214W 1134 nt17.04■□□□□ 0.32
ACF4P47129 CCC1YLR220W 969 nt17.02■□□□□ 0.32
ACF4P47129 ATS1YAL020C 1002 nt16.93■□□□□ 0.3
ACF4P47129 PET122YER153C 765 nt16.55■□□□□ 0.24
ACF4P47129 YBR190WYBR190W 312 nt16.51■□□□□ 0.23
ACF4P47129 SCR1SCR1 522 nt16.42■□□□□ 0.22
ACF4P47129 tP(UGG)O3tP(UGG)O3 72 nt16.39■□□□□ 0.21
ACF4P47129 RVS167YDR388W 1449 nt16.29■□□□□ 0.2
ACF4P47129 RRN5YLR141W 1092 nt16.11■□□□□ 0.17
ACF4P47129 RTC3YHR087W 336 nt16.1■□□□□ 0.17
ACF4P47129 YDJ1YNL064C 1230 nt15.87■□□□□ 0.13
ACF4P47129 SHR5YOL110W 714 nt15.82■□□□□ 0.12
ACF4P47129 RSB1YOR049C 1065 nt15.82■□□□□ 0.12
ACF4P47129 YER088W-BYER088W-B 147 nt15.8■□□□□ 0.12
ACF4P47129 PST2YDR032C 597 nt15.66■□□□□ 0.1
ACF4P47129 GAR1YHR089C 618 nt15.43■□□□□ 0.06
ACF4P47129 Q0182Q0182 405 nt15.42■□□□□ 0.06
ACF4P47129 DEP1YAL013W 1218 nt15.24■□□□□ 0.03
ACF4P47129 URN1YPR152C 1398 nt15.2■□□□□ 0.02
ACF4P47129 YKL097CYKL097C 411 nt15.13■□□□□ 0.01
ACF4P47129 MOT3YMR070W 1473 nt15.07■□□□□ 0
ACF4P47129 YNL208WYNL208W 600 nt15.06■□□□□ 0
ACF4P47129 RPN10YHR200W 807 nt15.02■□□□□ -0
ACF4P47129 OPI9YLR338W 858 nt14.95□□□□□ -0.02
ACF4P47129 SHU1YHL006C 453 nt14.94□□□□□ -0.02
ACF4P47129 TIR1YER011W 765 nt14.92□□□□□ -0.02
ACF4P47129 PUT4YOR348C 1884 nt14.8□□□□□ -0.04
ACF4P47129 SAH1YER043C 1350 nt14.76□□□□□ -0.05
ACF4P47129 SSA1YAL005C 1929 nt14.7□□□□□ -0.06
ACF4P47129 ARE1YCR048W 1833 nt14.62□□□□□ -0.07
ACF4P47129 YAL037C-BYAL037C-B 975 nt14.6□□□□□ -0.07
ACF4P47129 YJR018WYJR018W 363 nt14.53□□□□□ -0.08
ACF4P47129 SRB2YHR041C 633 nt14.52□□□□□ -0.09
ACF4P47129 PUN1YLR414C 792 nt14.51□□□□□ -0.09
ACF4P47129 YOR139CYOR139C 393 nt14.51□□□□□ -0.09
ACF4P47129 YJR120WYJR120W 351 nt14.4□□□□□ -0.1
ACF4P47129 YHR049C-AYHR049C-A 297 nt14.38□□□□□ -0.11
ACF4P47129 POA1YBR022W 534 nt14.33□□□□□ -0.12
ACF4P47129 WWM1YFL010C 636 nt14.31□□□□□ -0.12
ACF4P47129 YGR021WYGR021W 873 nt14.31□□□□□ -0.12
ACF4P47129 HOM6YJR139C 1080 nt14.29□□□□□ -0.12
ACF4P47129 RPP2BYDR382W 333 nt14.28□□□□□ -0.12
ACF4P47129 NPL3YDR432W 1245 nt14.28□□□□□ -0.12
ACF4P47129 PTC2YER089C 1395 nt14.27□□□□□ -0.12
ACF4P47129 MNP1YGL068W 585 nt14.23□□□□□ -0.13
ACF4P47129 SSA3YBL075C 1950 nt14.14□□□□□ -0.15
ACF4P47129 YOL037CYOL037C 354 nt14.11□□□□□ -0.15
ACF4P47129 YFL021C-AYFL021C-A 855 nt14.08□□□□□ -0.16
ACF4P47129 BDH2YAL061W 1254 nt14.07□□□□□ -0.16
ACF4P47129 RKM5YLR137W 1104 nt14.07□□□□□ -0.16
ACF4P47129 NAB2YGL122C 1578 nt14.06□□□□□ -0.16
ACF4P47129 BUD23YCR047C 828 nt14.05□□□□□ -0.16
ACF4P47129 INM2YDR287W 879 nt13.99□□□□□ -0.17
ACF4P47129 BSC6YOL137W 1494 nt13.97□□□□□ -0.17
ACF4P47129 LSM3YLR438C-A 270 nt13.95□□□□□ -0.18
ACF4P47129 tM(CAU)CtM(CAU)C 72 nt13.94□□□□□ -0.18
ACF4P47129 IMT4tM(CAU)E 72 nt13.94□□□□□ -0.18
ACF4P47129 IMT3tM(CAU)J3 72 nt13.94□□□□□ -0.18
ACF4P47129 IMT1tM(CAU)O1 72 nt13.94□□□□□ -0.18
ACF4P47129 IMT2tM(CAU)P 72 nt13.94□□□□□ -0.18
ACF4P47129 DAL1YIR027C 1383 nt13.93□□□□□ -0.18
ACF4P47129 FIS1YIL065C 468 nt13.9□□□□□ -0.18
ACF4P47129 YBL100CYBL100C 315 nt13.87□□□□□ -0.19
ACF4P47129 FPR4YLR449W 1179 nt13.85□□□□□ -0.19
ACF4P47129 PHO4YFR034C 939 nt13.79□□□□□ -0.2
ACF4P47129 YLR281CYLR281C 468 nt13.79□□□□□ -0.2
ACF4P47129 TRM9YML014W 840 nt13.75□□□□□ -0.21
ACF4P47129 FUN26YAL022C 1554 nt13.73□□□□□ -0.21
ACF4P47129 PUS2YGL063W 1113 nt13.71□□□□□ -0.21
ACF4P47129 WHI5YOR083W 888 nt13.69□□□□□ -0.22
ACF4P47129 CCT6YDR188W 1641 nt13.62□□□□□ -0.23
ACF4P47129 YLR154C-GYLR154C-G 150 nt13.48□□□□□ -0.25
ACF4P47129 SUF2tP(AGG)C 72 nt13.45□□□□□ -0.26
ACF4P47129 SUF10tP(AGG)N 72 nt13.45□□□□□ -0.26
ACF4P47129 YPS1YLR120C 1710 nt13.44□□□□□ -0.26
ACF4P47129 ALF1YNL148C 765 nt13.44□□□□□ -0.26
ACF4P47129 YPR011CYPR011C 981 nt13.44□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms