RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C LSO1Q3E827 93 aa7.98□□□□□ -1.13
CDC13YDL220C RTC1Q08281 1341 aa7.98□□□□□ -1.13
CDC13YDL220C SUM1P46676 1062 aa7.98□□□□□ -1.13
CDC13YDL220C KRE33P53914 1056 aaKnown RBP7.98□□□□□ -1.13
CDC13YDL220C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
CDC13YDL220C RIX7Q07844 837 aaKnown RBP7.98□□□□□ -1.13
CDC13YDL220C SEC66P33754 206 aa7.97□□□□□ -1.13
CDC13YDL220C HEL1P36113 551 aa7.97□□□□□ -1.13
CDC13YDL220C MRPL10P36520 322 aa7.97□□□□□ -1.13
CDC13YDL220C ATG2P53855 1592 aa7.97□□□□□ -1.13
CDC13YDL220C KRE28Q04431 385 aa7.97□□□□□ -1.13
CDC13YDL220C MET5P47169 1442 aa7.96□□□□□ -1.13
CDC13YDL220C RGD1P38339 666 aa7.96□□□□□ -1.13
CDC13YDL220C ERC1P38767 581 aa7.96□□□□□ -1.13
CDC13YDL220C RTF1P53064 558 aa7.96□□□□□ -1.13
CDC13YDL220C CLF1Q12309 687 aaPredicted RBP7.96□□□□□ -1.13
CDC13YDL220C CDC37P06101 506 aaKnown RBP7.96□□□□□ -1.14
CDC13YDL220C MRPS28P21771 286 aa7.96□□□□□ -1.14
CDC13YDL220C UBP1P25037 809 aa7.96□□□□□ -1.14
CDC13YDL220C CDC60P26637 1090 aaKnown RBP7.96□□□□□ -1.14
CDC13YDL220C RRP1P35178 278 aaPredicted RBP7.96□□□□□ -1.14
CDC13YDL220C IST1P53843 298 aaPredicted RBP7.96□□□□□ -1.14
CDC13YDL220C SES1P07284 462 aaKnown RBP7.95□□□□□ -1.14
CDC13YDL220C PTH2P34222 208 aa7.95□□□□□ -1.14
CDC13YDL220C YML119WQ03208 357 aa7.95□□□□□ -1.14
CDC13YDL220C YDR338CQ05497 695 aa7.95□□□□□ -1.14
CDC13YDL220C IOC2Q12072 812 aa7.95□□□□□ -1.14
CDC13YDL220C PDR18P53756 1333 aa7.95□□□□□ -1.14
CDC13YDL220C RME1P32338 300 aaKnown RBP7.95□□□□□ -1.14
CDC13YDL220C YEL1P34225 687 aa7.95□□□□□ -1.14
CDC13YDL220C ATG36P46983 293 aa7.95□□□□□ -1.14
CDC13YDL220C LCB5Q06147 687 aaKnown RBP7.95□□□□□ -1.14
CDC13YDL220C CTI6Q08923 506 aa7.95□□□□□ -1.14
CDC13YDL220C NPL4P33755 580 aa7.94□□□□□ -1.14
CDC13YDL220C SHE4P51534 789 aa7.94□□□□□ -1.14
CDC13YDL220C CWH41P53008 833 aa7.94□□□□□ -1.14
CDC13YDL220C HST2P53686 357 aa7.94□□□□□ -1.14
CDC13YDL220C ATG26Q06321 1198 aa7.94□□□□□ -1.14
CDC13YDL220C CMS1Q07897 291 aaKnown RBP7.94□□□□□ -1.14
CDC13YDL220C GEA2P39993 1459 aaKnown RBP7.94□□□□□ -1.14
CDC13YDL220C TIF3P34167 436 aaKnown RBP7.94□□□□□ -1.14
CDC13YDL220C NAB3P38996 802 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
CDC13YDL220C BDH2P39713 417 aa7.93□□□□□ -1.14
CDC13YDL220C RSM25P40496 264 aa7.93□□□□□ -1.14
CDC13YDL220C CTK3P46963 296 aaPredicted RBP7.93□□□□□ -1.14
CDC13YDL220C SRC1Q03707 834 aa7.93□□□□□ -1.14
CDC13YDL220C RPO31P04051 1460 aa7.93□□□□□ -1.14
CDC13YDL220C SWI6P09959 803 aa7.93□□□□□ -1.14
CDC13YDL220C VPS20Q04272 221 aa7.93□□□□□ -1.14
CDC13YDL220C TY1B-DR3Q99231 1755 aa7.93□□□□□ -1.14
CDC13YDL220C SEC23P15303 768 aaKnown RBP7.93□□□□□ -1.14
CDC13YDL220C SEC20P28791 383 aa7.93□□□□□ -1.14
CDC13YDL220C KAR9P32526 644 aa7.93□□□□□ -1.14
CDC13YDL220C SKI2P35207 1287 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
CDC13YDL220C NPR3P38742 1146 aa7.93□□□□□ -1.14
CDC13YDL220C MVP1P40959 511 aaKnown RBP7.93□□□□□ -1.14
CDC13YDL220C ADE12P80210 433 aaKnown RBP7.93□□□□□ -1.14
CDC13YDL220C CAT8P39113 1433 aa7.92□□□□□ -1.14
CDC13YDL220C YFR006WP43590 535 aa7.92□□□□□ -1.14
CDC13YDL220C PKH1Q03407 766 aa7.92□□□□□ -1.14
CDC13YDL220C MDS3P53094 1487 aa7.92□□□□□ -1.14
CDC13YDL220C PUF6Q04373 656 aaKnown RBP7.92□□□□□ -1.14
CDC13YDL220C YDR341CQ05506 607 aaKnown RBP7.92□□□□□ -1.14
CDC13YDL220C SDH5Q08230 162 aa7.92□□□□□ -1.14
CDC13YDL220C ALD4P46367 519 aaKnown RBP7.91□□□□□ -1.14
CDC13YDL220C MSH6Q03834 1242 aa7.91□□□□□ -1.14
CDC13YDL220C MPE1P35728 441 aaKnown RBP7.91□□□□□ -1.14
CDC13YDL220C STE20Q03497 939 aaKnown RBP7.91□□□□□ -1.14
CDC13YDL220C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
CDC13YDL220C BTN2P53286 410 aa7.9□□□□□ -1.14
CDC13YDL220C HST1P53685 503 aa7.9□□□□□ -1.14
CDC13YDL220C BET4Q00618 327 aa7.9□□□□□ -1.14
CDC13YDL220C YBT1P32386 1661 aa7.9□□□□□ -1.14
CDC13YDL220C SPE2P21182 396 aa7.9□□□□□ -1.15
CDC13YDL220C YIR042CP40586 236 aa7.9□□□□□ -1.15
CDC13YDL220C HRQ1Q05549 1077 aa7.9□□□□□ -1.15
CDC13YDL220C SLX4Q12098 748 aa7.9□□□□□ -1.15
CDC13YDL220C THR4P16120 514 aaKnown RBP7.89□□□□□ -1.15
CDC13YDL220C FAR1P21268 830 aa7.89□□□□□ -1.15
CDC13YDL220C CDC48P25694 835 aaKnown RBP7.89□□□□□ -1.15
CDC13YDL220C UBP13P38187 747 aa7.89□□□□□ -1.15
CDC13YDL220C YLF2P38746 405 aa7.89□□□□□ -1.15
CDC13YDL220C YIL092WP40497 633 aa7.89□□□□□ -1.15
CDC13YDL220C CCM1P48237 864 aaPredicted RBP7.89□□□□□ -1.15
CDC13YDL220C SEC5P89102 971 aa7.89□□□□□ -1.15
CDC13YDL220C TFB4Q12004 338 aa7.89□□□□□ -1.15
CDC13YDL220C SMC6Q12749 1114 aa7.89□□□□□ -1.15
CDC13YDL220C RPL17AP05740 184 aaKnown RBP7.88□□□□□ -1.15
CDC13YDL220C ILV3P39522 585 aaKnown RBP7.88□□□□□ -1.15
CDC13YDL220C OSW7P43611 510 aa7.88□□□□□ -1.15
CDC13YDL220C TAF1P46677 1066 aa7.88□□□□□ -1.15
CDC13YDL220C DSL1P53847 754 aa7.88□□□□□ -1.15
CDC13YDL220C INP2Q03824 705 aa7.88□□□□□ -1.15
CDC13YDL220C KRS1P15180 591 aaKnown RBP7.88□□□□□ -1.15
CDC13YDL220C CSE1P33307 960 aa7.88□□□□□ -1.15
CDC13YDL220C SHC1P39000 512 aa7.88□□□□□ -1.15
CDC13YDL220C PSK1P31374 1356 aa7.88□□□□□ -1.15
CDC13YDL220C PET123P17558 318 aa7.88□□□□□ -1.15
CDC13YDL220C SWC3P31376 625 aa7.88□□□□□ -1.15
CDC13YDL220C SEC6P32844 805 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms