Protein–RNA interactions for Protein: P40586

YIR042C, Uncharacterized protein YIR042C, yeastyeast

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YIR042CP40586 YML009W-BYML009W-B 477 nt24.45■■□□□ 1.5
YIR042CP40586 NSR1YGR159C 1245 nt24.04■■□□□ 1.44
YIR042CP40586 NOP1YDL014W 984 nt23.8■■□□□ 1.4
YIR042CP40586 YKL036CYKL036C 393 nt22.26■■□□□ 1.15
YIR042CP40586 MDJ1YFL016C 1536 nt21.18■□□□□ 0.98
YIR042CP40586 Q0297Q0297 156 nt21■□□□□ 0.95
YIR042CP40586 SRX1YKL086W 384 nt20.87■□□□□ 0.93
YIR042CP40586 YJL027CYJL027C 417 nt20.82■□□□□ 0.92
YIR042CP40586 SCS3YGL126W 1143 nt20.45■□□□□ 0.86
YIR042CP40586 YCR051WYCR051W 669 nt19.79■□□□□ 0.76
YIR042CP40586 YOL085CYOL085C 342 nt19.32■□□□□ 0.68
YIR042CP40586 PKP1YIL042C 1185 nt19.01■□□□□ 0.63
YIR042CP40586 DBP2YNL112W 1641 nt18.89■□□□□ 0.62
YIR042CP40586 RPP1BYDL130W 321 nt18.83■□□□□ 0.6
YIR042CP40586 TRN1tP(UGG)A 72 nt18.75■□□□□ 0.59
YIR042CP40586 SUF9tP(UGG)F 72 nt18.75■□□□□ 0.59
YIR042CP40586 SUF8tP(UGG)H 72 nt18.75■□□□□ 0.59
YIR042CP40586 tP(UGG)LtP(UGG)L 72 nt18.75■□□□□ 0.59
YIR042CP40586 SUF7tP(UGG)M 72 nt18.75■□□□□ 0.59
YIR042CP40586 tP(UGG)N1tP(UGG)N1 72 nt18.75■□□□□ 0.59
YIR042CP40586 tP(UGG)N2tP(UGG)N2 72 nt18.75■□□□□ 0.59
YIR042CP40586 tP(UGG)O1tP(UGG)O1 72 nt18.75■□□□□ 0.59
YIR042CP40586 SUF11tP(UGG)O2 72 nt18.75■□□□□ 0.59
YIR042CP40586 CCC1YLR220W 969 nt18.52■□□□□ 0.56
YIR042CP40586 SCJ1YMR214W 1134 nt18.38■□□□□ 0.53
YIR042CP40586 ATS1YAL020C 1002 nt18.35■□□□□ 0.53
YIR042CP40586 PET122YER153C 765 nt18■□□□□ 0.47
YIR042CP40586 YBR190WYBR190W 312 nt17.93■□□□□ 0.46
YIR042CP40586 tP(UGG)O3tP(UGG)O3 72 nt17.81■□□□□ 0.44
YIR042CP40586 SCR1SCR1 522 nt17.78■□□□□ 0.44
YIR042CP40586 RVS167YDR388W 1449 nt17.66■□□□□ 0.42
YIR042CP40586 RTC3YHR087W 336 nt17.52■□□□□ 0.4
YIR042CP40586 RRN5YLR141W 1092 nt17.49■□□□□ 0.39
YIR042CP40586 YDJ1YNL064C 1230 nt17.2■□□□□ 0.34
YIR042CP40586 YER088W-BYER088W-B 147 nt17.17■□□□□ 0.34
YIR042CP40586 SHR5YOL110W 714 nt17.17■□□□□ 0.34
YIR042CP40586 RSB1YOR049C 1065 nt17.17■□□□□ 0.34
YIR042CP40586 PST2YDR032C 597 nt16.97■□□□□ 0.31
YIR042CP40586 GAR1YHR089C 618 nt16.78■□□□□ 0.28
YIR042CP40586 DEP1YAL013W 1218 nt16.63■□□□□ 0.25
YIR042CP40586 URN1YPR152C 1398 nt16.53■□□□□ 0.24
YIR042CP40586 YKL097CYKL097C 411 nt16.38■□□□□ 0.21
YIR042CP40586 YNL208WYNL208W 600 nt16.35■□□□□ 0.21
YIR042CP40586 RPN10YHR200W 807 nt16.27■□□□□ 0.2
YIR042CP40586 OPI9YLR338W 858 nt16.25■□□□□ 0.19
YIR042CP40586 SHU1YHL006C 453 nt16.24■□□□□ 0.19
YIR042CP40586 TIR1YER011W 765 nt16.21■□□□□ 0.19
YIR042CP40586 PUT4YOR348C 1884 nt16.15■□□□□ 0.18
YIR042CP40586 SAH1YER043C 1350 nt16.11■□□□□ 0.17
YIR042CP40586 SSA1YAL005C 1929 nt16.02■□□□□ 0.16
YIR042CP40586 ARE1YCR048W 1833 nt15.96■□□□□ 0.14
YIR042CP40586 YAL037C-BYAL037C-B 975 nt15.9■□□□□ 0.14
YIR042CP40586 SRB2YHR041C 633 nt15.89■□□□□ 0.13
YIR042CP40586 YJR018WYJR018W 363 nt15.78■□□□□ 0.12
YIR042CP40586 YOR139CYOR139C 393 nt15.77■□□□□ 0.12
YIR042CP40586 PUN1YLR414C 792 nt15.74■□□□□ 0.11
YIR042CP40586 YJR120WYJR120W 351 nt15.73■□□□□ 0.11
YIR042CP40586 YHR049C-AYHR049C-A 297 nt15.7■□□□□ 0.1
YIR042CP40586 POA1YBR022W 534 nt15.63■□□□□ 0.09
YIR042CP40586 WWM1YFL010C 636 nt15.58■□□□□ 0.08
YIR042CP40586 PTC2YER089C 1395 nt15.54■□□□□ 0.08
YIR042CP40586 HOM6YJR139C 1080 nt15.53■□□□□ 0.08
YIR042CP40586 MNP1YGL068W 585 nt15.52■□□□□ 0.08
YIR042CP40586 YGR021WYGR021W 873 nt15.49■□□□□ 0.07
YIR042CP40586 NPL3YDR432W 1245 nt15.47■□□□□ 0.07
YIR042CP40586 RPP2BYDR382W 333 nt15.46■□□□□ 0.07
YIR042CP40586 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
YIR042CP40586 BUD23YCR047C 828 nt15.33■□□□□ 0.04
YIR042CP40586 YFL021C-AYFL021C-A 855 nt15.28■□□□□ 0.04
YIR042CP40586 RKM5YLR137W 1104 nt15.28■□□□□ 0.04
YIR042CP40586 YOL037CYOL037C 354 nt15.28■□□□□ 0.04
YIR042CP40586 NAB2YGL122C 1578 nt15.28■□□□□ 0.04
YIR042CP40586 BDH2YAL061W 1254 nt15.27■□□□□ 0.04
YIR042CP40586 BSC6YOL137W 1494 nt15.26■□□□□ 0.03
YIR042CP40586 FIS1YIL065C 468 nt15.18■□□□□ 0.02
YIR042CP40586 INM2YDR287W 879 nt15.15■□□□□ 0.02
YIR042CP40586 DAL1YIR027C 1383 nt15.14■□□□□ 0.01
YIR042CP40586 tM(CAU)CtM(CAU)C 72 nt15.11■□□□□ 0.01
YIR042CP40586 IMT4tM(CAU)E 72 nt15.11■□□□□ 0.01
YIR042CP40586 IMT3tM(CAU)J3 72 nt15.11■□□□□ 0.01
YIR042CP40586 IMT1tM(CAU)O1 72 nt15.11■□□□□ 0.01
YIR042CP40586 IMT2tM(CAU)P 72 nt15.11■□□□□ 0.01
YIR042CP40586 LSM3YLR438C-A 270 nt15.11■□□□□ 0.01
YIR042CP40586 FPR4YLR449W 1179 nt15.08■□□□□ 0
YIR042CP40586 YBL100CYBL100C 315 nt15.08■□□□□ 0
YIR042CP40586 PHO4YFR034C 939 nt15.02■□□□□ -0
YIR042CP40586 YLR281CYLR281C 468 nt14.96□□□□□ -0.01
YIR042CP40586 FUN26YAL022C 1554 nt14.93□□□□□ -0.02
YIR042CP40586 TRM9YML014W 840 nt14.89□□□□□ -0.03
YIR042CP40586 PUS2YGL063W 1113 nt14.88□□□□□ -0.03
YIR042CP40586 WHI5YOR083W 888 nt14.86□□□□□ -0.03
YIR042CP40586 CCT6YDR188W 1641 nt14.79□□□□□ -0.04
YIR042CP40586 YPR011CYPR011C 981 nt14.66□□□□□ -0.06
YIR042CP40586 YPS1YLR120C 1710 nt14.64□□□□□ -0.07
YIR042CP40586 YLR154C-GYLR154C-G 150 nt14.63□□□□□ -0.07
YIR042CP40586 MOT3YMR070W 1473 nt14.62□□□□□ -0.07
YIR042CP40586 YLR236CYLR236C 324 nt14.61□□□□□ -0.07
YIR042CP40586 YDR095CYDR095C 411 nt14.59□□□□□ -0.07
YIR042CP40586 ALF1YNL148C 765 nt14.58□□□□□ -0.08
YIR042CP40586 SUF2tP(AGG)C 72 nt14.56□□□□□ -0.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms