Protein–RNA interactions for Protein: P46963

CTK3, CTD kinase subunit gamma, yeastyeast

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK3P46963 NSR1YGR159C 1245 nt20.7■□□□□ 0.9
CTK3P46963 YML009W-BYML009W-B 477 nt20.28■□□□□ 0.84
CTK3P46963 NOP1YDL014W 984 nt19.63■□□□□ 0.73
CTK3P46963 MDJ1YFL016C 1536 nt19.13■□□□□ 0.65
CTK3P46963 YKL036CYKL036C 393 nt18.33■□□□□ 0.52
CTK3P46963 YJL027CYJL027C 417 nt17.51■□□□□ 0.39
CTK3P46963 Q0297Q0297 156 nt17.3■□□□□ 0.36
CTK3P46963 SRX1YKL086W 384 nt17.18■□□□□ 0.34
CTK3P46963 SCS3YGL126W 1143 nt16.8■□□□□ 0.28
CTK3P46963 DBP2YNL112W 1641 nt16.66■□□□□ 0.26
CTK3P46963 YBR190WYBR190W 312 nt16.4■□□□□ 0.22
CTK3P46963 YCR051WYCR051W 669 nt16.27■□□□□ 0.2
CTK3P46963 SSA3YBL075C 1950 nt16.18■□□□□ 0.18
CTK3P46963 RTC3YHR087W 336 nt16.04■□□□□ 0.16
CTK3P46963 YOL085CYOL085C 342 nt15.89■□□□□ 0.13
CTK3P46963 TRN1tP(UGG)A 72 nt15.75■□□□□ 0.11
CTK3P46963 SUF9tP(UGG)F 72 nt15.75■□□□□ 0.11
CTK3P46963 SUF8tP(UGG)H 72 nt15.75■□□□□ 0.11
CTK3P46963 tP(UGG)LtP(UGG)L 72 nt15.75■□□□□ 0.11
CTK3P46963 SUF7tP(UGG)M 72 nt15.75■□□□□ 0.11
CTK3P46963 tP(UGG)N1tP(UGG)N1 72 nt15.75■□□□□ 0.11
CTK3P46963 tP(UGG)N2tP(UGG)N2 72 nt15.75■□□□□ 0.11
CTK3P46963 tP(UGG)O1tP(UGG)O1 72 nt15.75■□□□□ 0.11
CTK3P46963 SUF11tP(UGG)O2 72 nt15.75■□□□□ 0.11
CTK3P46963 CCC1YLR220W 969 nt15.65■□□□□ 0.1
CTK3P46963 PKP1YIL042C 1185 nt15.59■□□□□ 0.09
CTK3P46963 RPP1BYDL130W 321 nt15.51■□□□□ 0.07
CTK3P46963 PUT4YOR348C 1884 nt15.49■□□□□ 0.07
CTK3P46963 RVS167YDR388W 1449 nt15.36■□□□□ 0.05
CTK3P46963 SCJ1YMR214W 1134 nt15.28■□□□□ 0.04
CTK3P46963 ATS1YAL020C 1002 nt15.09■□□□□ 0.01
CTK3P46963 ARE1YCR048W 1833 nt15.01□□□□□ -0.01
CTK3P46963 POA1YBR022W 534 nt14.98□□□□□ -0.01
CTK3P46963 SAH1YER043C 1350 nt14.83□□□□□ -0.04
CTK3P46963 PET122YER153C 765 nt14.79□□□□□ -0.04
CTK3P46963 YHR049C-AYHR049C-A 297 nt14.79□□□□□ -0.04
CTK3P46963 URN1YPR152C 1398 nt14.77□□□□□ -0.04
CTK3P46963 BSC6YOL137W 1494 nt14.76□□□□□ -0.05
CTK3P46963 SHR5YOL110W 714 nt14.7□□□□□ -0.06
CTK3P46963 tP(UGG)O3tP(UGG)O3 72 nt14.69□□□□□ -0.06
CTK3P46963 OPI9YLR338W 858 nt14.67□□□□□ -0.06
CTK3P46963 SCR1SCR1 522 nt14.64□□□□□ -0.07
CTK3P46963 DEP1YAL013W 1218 nt14.63□□□□□ -0.07
CTK3P46963 SPT5YML010W 3192 nt14.62□□□□□ -0.07
CTK3P46963 SSA4YER103W 1929 nt14.41□□□□□ -0.1
CTK3P46963 BUD23YCR047C 828 nt14.41□□□□□ -0.1
CTK3P46963 RRN5YLR141W 1092 nt14.38□□□□□ -0.11
CTK3P46963 RPN10YHR200W 807 nt14.27□□□□□ -0.13
CTK3P46963 PTC2YER089C 1395 nt14.22□□□□□ -0.13
CTK3P46963 YNL208WYNL208W 600 nt14.21□□□□□ -0.13
CTK3P46963 PUN1YLR414C 792 nt14.19□□□□□ -0.14
CTK3P46963 YDJ1YNL064C 1230 nt14.18□□□□□ -0.14
CTK3P46963 YER088W-BYER088W-B 147 nt14.12□□□□□ -0.15
CTK3P46963 RSB1YOR049C 1065 nt14.11□□□□□ -0.15
CTK3P46963 NAB2YGL122C 1578 nt14.08□□□□□ -0.16
CTK3P46963 GAR1YHR089C 618 nt14.04□□□□□ -0.16
CTK3P46963 YJR018WYJR018W 363 nt14.03□□□□□ -0.16
CTK3P46963 PST2YDR032C 597 nt13.97□□□□□ -0.17
CTK3P46963 BDF1YLR399C 2061 nt13.94□□□□□ -0.18
CTK3P46963 MEP2YNL142W 1500 nt13.9□□□□□ -0.18
CTK3P46963 FIS1YIL065C 468 nt13.84□□□□□ -0.19
CTK3P46963 FPR4YLR449W 1179 nt13.77□□□□□ -0.21
CTK3P46963 DAL1YIR027C 1383 nt13.75□□□□□ -0.21
CTK3P46963 YJR120WYJR120W 351 nt13.75□□□□□ -0.21
CTK3P46963 DCW1YKL046C 1350 nt13.74□□□□□ -0.21
CTK3P46963 TAT1YBR069C 1860 nt13.71□□□□□ -0.21
CTK3P46963 PHO4YFR034C 939 nt13.66□□□□□ -0.22
CTK3P46963 YPS1YLR120C 1710 nt13.64□□□□□ -0.23
CTK3P46963 SSA1YAL005C 1929 nt13.6□□□□□ -0.23
CTK3P46963 INM2YDR287W 879 nt13.57□□□□□ -0.24
CTK3P46963 TIR1YER011W 765 nt13.56□□□□□ -0.24
CTK3P46963 YHR165W-AYHR165W-A 312 nt13.53□□□□□ -0.24
CTK3P46963 RPP2BYDR382W 333 nt13.49□□□□□ -0.25
CTK3P46963 EMI2YDR516C 1503 nt13.49□□□□□ -0.25
CTK3P46963 YBR220CYBR220C 1683 nt13.48□□□□□ -0.25
CTK3P46963 YKL097CYKL097C 411 nt13.47□□□□□ -0.25
CTK3P46963 YDR095CYDR095C 411 nt13.43□□□□□ -0.26
CTK3P46963 YBL100CYBL100C 315 nt13.36□□□□□ -0.27
CTK3P46963 YMR090WYMR090W 684 nt13.35□□□□□ -0.27
CTK3P46963 SRB2YHR041C 633 nt13.34□□□□□ -0.27
CTK3P46963 PAC11YDR488C 1602 nt13.33□□□□□ -0.28
CTK3P46963 SHU1YHL006C 453 nt13.33□□□□□ -0.28
CTK3P46963 CAC2YML102W 1407 nt13.32□□□□□ -0.28
CTK3P46963 YDL221WYDL221W 552 nt13.3□□□□□ -0.28
CTK3P46963 SDH1YKL148C 1923 nt13.29□□□□□ -0.28
CTK3P46963 PTP1YDL230W 1008 nt13.27□□□□□ -0.29
CTK3P46963 FUN26YAL022C 1554 nt13.2□□□□□ -0.3
CTK3P46963 RPP2AYOL039W 321 nt13.18□□□□□ -0.3
CTK3P46963 BDH2YAL061W 1254 nt13.15□□□□□ -0.3
CTK3P46963 ALF1YNL148C 765 nt13.12□□□□□ -0.31
CTK3P46963 SCC4YER147C 1875 nt13.11□□□□□ -0.31
CTK3P46963 PCH2YBR186W 1695 nt13.11□□□□□ -0.31
CTK3P46963 IRC15YPL017C 1500 nt13.1□□□□□ -0.31
CTK3P46963 GUT2YIL155C 1950 nt13.08□□□□□ -0.32
CTK3P46963 YAL037C-BYAL037C-B 975 nt13.04□□□□□ -0.32
CTK3P46963 TRM9YML014W 840 nt13.03□□□□□ -0.32
CTK3P46963 GIS3YLR094C 1509 nt13.03□□□□□ -0.32
CTK3P46963 SEC11YIR022W 504 nt12.99□□□□□ -0.33
CTK3P46963 SIS1YNL007C 1059 nt12.97□□□□□ -0.33
CTK3P46963 YOR139CYOR139C 393 nt12.95□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms