Protein–RNA interactions for Protein: P38339

RGD1, RHO GTPase-activating protein RGD1, yeastyeast

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD1P38339 YML009W-BYML009W-B 477 nt21.63■■□□□ 1.05
RGD1P38339 NSR1YGR159C 1245 nt21.32■■□□□ 1
RGD1P38339 NOP1YDL014W 984 nt21.27■■□□□ 1
RGD1P38339 YKL036CYKL036C 393 nt19.8■□□□□ 0.76
RGD1P38339 MDJ1YFL016C 1536 nt19.05■□□□□ 0.64
RGD1P38339 Q0297Q0297 156 nt18.62■□□□□ 0.57
RGD1P38339 YJL027CYJL027C 417 nt18.52■□□□□ 0.56
RGD1P38339 SRX1YKL086W 384 nt18.5■□□□□ 0.55
RGD1P38339 SCS3YGL126W 1143 nt18.07■□□□□ 0.48
RGD1P38339 YCR051WYCR051W 669 nt17.57■□□□□ 0.4
RGD1P38339 YOL085CYOL085C 342 nt17.08■□□□□ 0.32
RGD1P38339 PKP1YIL042C 1185 nt16.73■□□□□ 0.27
RGD1P38339 RPP1BYDL130W 321 nt16.71■□□□□ 0.27
RGD1P38339 DBP2YNL112W 1641 nt16.63■□□□□ 0.25
RGD1P38339 TRN1tP(UGG)A 72 nt16.51■□□□□ 0.23
RGD1P38339 SUF9tP(UGG)F 72 nt16.51■□□□□ 0.23
RGD1P38339 SUF8tP(UGG)H 72 nt16.51■□□□□ 0.23
RGD1P38339 tP(UGG)LtP(UGG)L 72 nt16.51■□□□□ 0.23
RGD1P38339 SUF7tP(UGG)M 72 nt16.51■□□□□ 0.23
RGD1P38339 tP(UGG)N1tP(UGG)N1 72 nt16.51■□□□□ 0.23
RGD1P38339 tP(UGG)N2tP(UGG)N2 72 nt16.51■□□□□ 0.23
RGD1P38339 tP(UGG)O1tP(UGG)O1 72 nt16.51■□□□□ 0.23
RGD1P38339 SUF11tP(UGG)O2 72 nt16.51■□□□□ 0.23
RGD1P38339 SCJ1YMR214W 1134 nt16.5■□□□□ 0.23
RGD1P38339 YBR190WYBR190W 312 nt16.36■□□□□ 0.21
RGD1P38339 CCC1YLR220W 969 nt16.35■□□□□ 0.21
RGD1P38339 ATS1YAL020C 1002 nt16.27■□□□□ 0.2
RGD1P38339 SSA3YBL075C 1950 nt16.15■□□□□ 0.18
RGD1P38339 RTC3YHR087W 336 nt15.94■□□□□ 0.14
RGD1P38339 SCR1SCR1 522 nt15.92■□□□□ 0.14
RGD1P38339 PET122YER153C 765 nt15.85■□□□□ 0.13
RGD1P38339 RVS167YDR388W 1449 nt15.77■□□□□ 0.12
RGD1P38339 tP(UGG)O3tP(UGG)O3 72 nt15.73■□□□□ 0.11
RGD1P38339 PUT4YOR348C 1884 nt15.46■□□□□ 0.07
RGD1P38339 RRN5YLR141W 1092 nt15.45■□□□□ 0.06
RGD1P38339 YDJ1YNL064C 1230 nt15.27■□□□□ 0.04
RGD1P38339 RSB1YOR049C 1065 nt15.25■□□□□ 0.03
RGD1P38339 SHR5YOL110W 714 nt15.21■□□□□ 0.03
RGD1P38339 YER088W-BYER088W-B 147 nt15.14■□□□□ 0.01
RGD1P38339 PST2YDR032C 597 nt15□□□□□ -0.01
RGD1P38339 ARE1YCR048W 1833 nt14.98□□□□□ -0.01
RGD1P38339 POA1YBR022W 534 nt14.89□□□□□ -0.03
RGD1P38339 GAR1YHR089C 618 nt14.82□□□□□ -0.04
RGD1P38339 SAH1YER043C 1350 nt14.75□□□□□ -0.05
RGD1P38339 YHR049C-AYHR049C-A 297 nt14.74□□□□□ -0.05
RGD1P38339 URN1YPR152C 1398 nt14.71□□□□□ -0.06
RGD1P38339 BSC6YOL137W 1494 nt14.7□□□□□ -0.06
RGD1P38339 SPT5YML010W 3192 nt14.65□□□□□ -0.06
RGD1P38339 OPI9YLR338W 858 nt14.63□□□□□ -0.07
RGD1P38339 YKL097CYKL097C 411 nt14.62□□□□□ -0.07
RGD1P38339 DEP1YAL013W 1218 nt14.59□□□□□ -0.07
RGD1P38339 RPN10YHR200W 807 nt14.57□□□□□ -0.08
RGD1P38339 YNL208WYNL208W 600 nt14.51□□□□□ -0.09
RGD1P38339 SSA4YER103W 1929 nt14.39□□□□□ -0.11
RGD1P38339 TIR1YER011W 765 nt14.33□□□□□ -0.12
RGD1P38339 BUD23YCR047C 828 nt14.32□□□□□ -0.12
RGD1P38339 SHU1YHL006C 453 nt14.29□□□□□ -0.12
RGD1P38339 PTC2YER089C 1395 nt14.16□□□□□ -0.14
RGD1P38339 PUN1YLR414C 792 nt14.15□□□□□ -0.14
RGD1P38339 NAB2YGL122C 1578 nt14.03□□□□□ -0.16
RGD1P38339 SSA1YAL005C 1929 nt14.02□□□□□ -0.17
RGD1P38339 YJR018WYJR018W 363 nt13.97□□□□□ -0.17
RGD1P38339 YAL037C-BYAL037C-B 975 nt13.95□□□□□ -0.18
RGD1P38339 BDF1YLR399C 2061 nt13.95□□□□□ -0.18
RGD1P38339 MEP2YNL142W 1500 nt13.87□□□□□ -0.19
RGD1P38339 RPP2BYDR382W 333 nt13.85□□□□□ -0.19
RGD1P38339 YOR139CYOR139C 393 nt13.85□□□□□ -0.19
RGD1P38339 YGR021WYGR021W 873 nt13.84□□□□□ -0.19
RGD1P38339 FIS1YIL065C 468 nt13.83□□□□□ -0.2
RGD1P38339 NPL3YDR432W 1245 nt13.82□□□□□ -0.2
RGD1P38339 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
RGD1P38339 DAL1YIR027C 1383 nt13.72□□□□□ -0.21
RGD1P38339 TAT1YBR069C 1860 nt13.72□□□□□ -0.21
RGD1P38339 WWM1YFL010C 636 nt13.69□□□□□ -0.22
RGD1P38339 SRB2YHR041C 633 nt13.69□□□□□ -0.22
RGD1P38339 HOM6YJR139C 1080 nt13.69□□□□□ -0.22
RGD1P38339 DCW1YKL046C 1350 nt13.69□□□□□ -0.22
RGD1P38339 FPR4YLR449W 1179 nt13.67□□□□□ -0.22
RGD1P38339 YOL037CYOL037C 354 nt13.64□□□□□ -0.23
RGD1P38339 PHO4YFR034C 939 nt13.62□□□□□ -0.23
RGD1P38339 YPS1YLR120C 1710 nt13.61□□□□□ -0.23
RGD1P38339 MNP1YGL068W 585 nt13.6□□□□□ -0.23
RGD1P38339 YFL021C-AYFL021C-A 855 nt13.57□□□□□ -0.24
RGD1P38339 Q0182Q0182 405 nt13.57□□□□□ -0.24
RGD1P38339 BDH2YAL061W 1254 nt13.53□□□□□ -0.24
RGD1P38339 INM2YDR287W 879 nt13.52□□□□□ -0.25
RGD1P38339 RKM5YLR137W 1104 nt13.5□□□□□ -0.25
RGD1P38339 YHR165W-AYHR165W-A 312 nt13.46□□□□□ -0.25
RGD1P38339 LSM3YLR438C-A 270 nt13.46□□□□□ -0.25
RGD1P38339 YBR220CYBR220C 1683 nt13.45□□□□□ -0.26
RGD1P38339 EMI2YDR516C 1503 nt13.44□□□□□ -0.26
RGD1P38339 YDR095CYDR095C 411 nt13.41□□□□□ -0.26
RGD1P38339 tM(CAU)CtM(CAU)C 72 nt13.34□□□□□ -0.27
RGD1P38339 IMT4tM(CAU)E 72 nt13.34□□□□□ -0.27
RGD1P38339 IMT3tM(CAU)J3 72 nt13.34□□□□□ -0.27
RGD1P38339 IMT1tM(CAU)O1 72 nt13.34□□□□□ -0.27
RGD1P38339 IMT2tM(CAU)P 72 nt13.34□□□□□ -0.27
RGD1P38339 YBL100CYBL100C 315 nt13.34□□□□□ -0.27
RGD1P38339 YMR090WYMR090W 684 nt13.29□□□□□ -0.28
RGD1P38339 YDL221WYDL221W 552 nt13.28□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms