RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C BFR2Q06631 534 aaKnown RBP11.26□□□□□ -0.61
CDC13YDL220C RQC2Q12532 1038 aaKnown RBP11.18□□□□□ -0.62
CDC13YDL220C NOP2P40991 618 aaKnown RBP10.47□□□□□ -0.73
CDC13YDL220C EBP2P36049 427 aaKnown RBP10.2□□□□□ -0.78
CDC13YDL220C CAB3P36076 571 aa10.19□□□□□ -0.78
CDC13YDL220C NSR1P27476 414 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
CDC13YDL220C URN1Q06525 465 aaKnown RBP10.1□□□□□ -0.79
CDC13YDL220C SIS2P36024 562 aa9.98□□□□□ -0.81
CDC13YDL220C YPR148CQ06523 435 aa9.87□□□□□ -0.83
CDC13YDL220C AVT3P36062 692 aa9.81□□□□□ -0.84
CDC13YDL220C SPA2P23201 1466 aaKnown RBP9.68□□□□□ -0.86
CDC13YDL220C YFR016CP43597 1233 aaKnown RBP9.66□□□□□ -0.86
CDC13YDL220C TAF7Q05021 590 aa9.62□□□□□ -0.87
CDC13YDL220C SGS1P35187 1447 aa9.58□□□□□ -0.88
CDC13YDL220C SSN2P38931 1420 aa9.53□□□□□ -0.88
CDC13YDL220C SKI3P17883 1432 aaKnown RBP9.48□□□□□ -0.89
CDC13YDL220C CWC22P53333 577 aaKnown RBP9.42□□□□□ -0.9
CDC13YDL220C RPS0BP46654 252 aaKnown RBP9.39□□□□□ -0.91
CDC13YDL220C MON2P48563 1636 aaPredicted RBP9.36□□□□□ -0.91
CDC13YDL220C INO80P53115 1489 aa9.35□□□□□ -0.91
CDC13YDL220C RSE1Q04693 1361 aaKnown RBP9.33□□□□□ -0.92
CDC13YDL220C TCB2P48231 1178 aa9.31□□□□□ -0.92
CDC13YDL220C LEO1P38439 464 aa9.31□□□□□ -0.92
CDC13YDL220C ENP1P38333 483 aaKnown RBP9.3□□□□□ -0.92
CDC13YDL220C DRS1P32892 752 aaKnown RBP9.29□□□□□ -0.92
CDC13YDL220C KRI1P42846 591 aaKnown RBP9.27□□□□□ -0.93
CDC13YDL220C DIP2Q12220 943 aaPredicted RBP9.27□□□□□ -0.93
CDC13YDL220C AIM44Q99299 758 aa9.27□□□□□ -0.93
CDC13YDL220C MNN4P36044 1178 aa9.24□□□□□ -0.93
CDC13YDL220C ENV11P53246 860 aa9.19□□□□□ -0.94
CDC13YDL220C CLC1P17891 233 aa9.17□□□□□ -0.94
CDC13YDL220C SEC3P33332 1336 aaKnown RBP9.16□□□□□ -0.94
CDC13YDL220C TCB3Q03640 1545 aaKnown RBP9.12□□□□□ -0.95
CDC13YDL220C IME2P32581 645 aa9.11□□□□□ -0.95
CDC13YDL220C SPT21P35209 758 aa9.11□□□□□ -0.95
CDC13YDL220C SPT7P35177 1332 aa9.08□□□□□ -0.96
CDC13YDL220C FPR3P38911 411 aaKnown RBP9.08□□□□□ -0.96
CDC13YDL220C DEF1P35732 738 aaKnown RBP9.07□□□□□ -0.96
CDC13YDL220C YGR130CP53278 816 aa9.05□□□□□ -0.96
CDC13YDL220C YRB30P53107 440 aaPredicted RBP9.05□□□□□ -0.96
CDC13YDL220C PRS1P32895 427 aaKnown RBP9.04□□□□□ -0.96
CDC13YDL220C NUG1P40010 520 aaKnown RBP9.04□□□□□ -0.96
CDC13YDL220C STH1P32597 1359 aa9.02□□□□□ -0.97
CDC13YDL220C PSH1Q12161 406 aa9.01□□□□□ -0.97
CDC13YDL220C NOP53Q12080 455 aaKnown RBP8.99□□□□□ -0.97
CDC13YDL220C QCR6P00127 147 aa8.97□□□□□ -0.97
CDC13YDL220C RNA1P11745 407 aaKnown RBP8.97□□□□□ -0.97
CDC13YDL220C POL5P39985 1022 aaKnown RBP8.96□□□□□ -0.97
CDC13YDL220C SAS10Q12136 610 aaPredicted RBP8.96□□□□□ -0.98
CDC13YDL220C OPY1P38271 328 aa8.95□□□□□ -0.98
CDC13YDL220C TFA1P36100 482 aa8.95□□□□□ -0.98
CDC13YDL220C FPR4Q06205 392 aaPredicted RBP8.95□□□□□ -0.98
CDC13YDL220C RLF2Q12495 606 aa8.94□□□□□ -0.98
CDC13YDL220C MMS22Q06164 1454 aa8.94□□□□□ -0.98
CDC13YDL220C CFT1Q06632 1357 aaKnown RBP8.93□□□□□ -0.98
CDC13YDL220C EAF7P53911 425 aaKnown RBP8.91□□□□□ -0.98
CDC13YDL220C DNA2P38859 1522 aa8.9□□□□□ -0.98
CDC13YDL220C SPT2P06843 333 aaPredicted RBP8.9□□□□□ -0.99
CDC13YDL220C LEU3P08638 886 aa8.88□□□□□ -0.99
CDC13YDL220C CHD1P32657 1468 aa8.87□□□□□ -0.99
CDC13YDL220C FUN12P39730 1002 aaKnown RBP8.86□□□□□ -0.99
CDC13YDL220C RPC31P17890 251 aa8.85□□□□□ -0.99
CDC13YDL220C MTC1P47018 478 aaKnown RBP8.84□□□□□ -1
CDC13YDL220C SWE1P32944 819 aa8.83□□□□□ -1
CDC13YDL220C UFD4P33202 1483 aa8.83□□□□□ -1
CDC13YDL220C NAP1P25293 417 aaKnown RBP8.83□□□□□ -1
CDC13YDL220C IOC4Q04213 475 aa8.82□□□□□ -1
CDC13YDL220C SNF7P39929 240 aaKnown RBP8.8□□□□□ -1
CDC13YDL220C RLP24Q07915 199 aaKnown RBP8.8□□□□□ -1
CDC13YDL220C SPC110P32380 944 aa8.8□□□□□ -1
CDC13YDL220C PAF1P38351 445 aa8.79□□□□□ -1
CDC13YDL220C RAD26P40352 1085 aa8.79□□□□□ -1
CDC13YDL220C XRN1P22147 1528 aaKnown RBP8.77□□□□□ -1
CDC13YDL220C NMD2P38798 1089 aaKnown RBP8.75□□□□□ -1.01
CDC13YDL220C IFH1P39520 1085 aa8.75□□□□□ -1.01
CDC13YDL220C CTR9P89105 1077 aa8.75□□□□□ -1.01
CDC13YDL220C ECM5Q03214 1411 aa8.75□□□□□ -1.01
CDC13YDL220C GRX3Q03835 250 aa8.74□□□□□ -1.01
CDC13YDL220C YTA7P40340 1379 aa8.73□□□□□ -1.01
CDC13YDL220C SPP41P38904 1435 aa8.73□□□□□ -1.01
CDC13YDL220C RIX1P38883 763 aaPredicted RBP8.73□□□□□ -1.01
CDC13YDL220C KOG1P38873 1557 aa8.72□□□□□ -1.01
CDC13YDL220C SWR1Q05471 1514 aa8.72□□□□□ -1.01
CDC13YDL220C DOS2P54858 310 aa8.72□□□□□ -1.01
CDC13YDL220C ROX1P25042 368 aa8.71□□□□□ -1.01
CDC13YDL220C YNL011CP53980 444 aa8.71□□□□□ -1.02
CDC13YDL220C TRM732Q03496 1420 aa8.7□□□□□ -1.02
CDC13YDL220C RTT106P40161 455 aa8.7□□□□□ -1.02
CDC13YDL220C YPP1P46951 817 aa8.69□□□□□ -1.02
CDC13YDL220C DJP1P40564 432 aa8.68□□□□□ -1.02
CDC13YDL220C NOP58Q12499 511 aaKnown RBP8.68□□□□□ -1.02
CDC13YDL220C SLN1P39928 1220 aaPredicted RBP8.68□□□□□ -1.02
CDC13YDL220C ETT1Q08421 412 aaKnown RBP8.68□□□□□ -1.02
CDC13YDL220C MSH3P25336 1018 aa8.67□□□□□ -1.02
CDC13YDL220C HSP82P02829 709 aaKnown RBP8.67□□□□□ -1.02
CDC13YDL220C IKI3Q06706 1349 aaKnown RBP8.66□□□□□ -1.02
CDC13YDL220C CLB5P30283 435 aa8.65□□□□□ -1.02
CDC13YDL220C SIC1P38634 284 aa8.64□□□□□ -1.03
CDC13YDL220C PSD2P53037 1138 aaKnown RBP8.64□□□□□ -1.03
CDC13YDL220C VPS4P52917 437 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms