Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 YML009W-BYML009W-B 477 nt22.67■■□□□ 1.22
CDC48P25694 NSR1YGR159C 1245 nt22.45■■□□□ 1.18
CDC48P25694 NOP1YDL014W 984 nt22.18■■□□□ 1.14
CDC48P25694 YKL036CYKL036C 393 nt20.65■□□□□ 0.9
CDC48P25694 MDJ1YFL016C 1536 nt19.67■□□□□ 0.74
CDC48P25694 Q0297Q0297 156 nt19.53■□□□□ 0.72
CDC48P25694 SRX1YKL086W 384 nt19.4■□□□□ 0.7
CDC48P25694 YJL027CYJL027C 417 nt19.28■□□□□ 0.68
CDC48P25694 SCS3YGL126W 1143 nt18.89■□□□□ 0.61
CDC48P25694 YCR051WYCR051W 669 nt18.35■□□□□ 0.53
CDC48P25694 YOL085CYOL085C 342 nt17.9■□□□□ 0.46
CDC48P25694 DBP2YNL112W 1641 nt17.55■□□□□ 0.4
CDC48P25694 PKP1YIL042C 1185 nt17.54■□□□□ 0.4
CDC48P25694 RPP1BYDL130W 321 nt17.5■□□□□ 0.39
CDC48P25694 TRN1tP(UGG)A 72 nt17.42■□□□□ 0.38
CDC48P25694 SUF9tP(UGG)F 72 nt17.42■□□□□ 0.38
CDC48P25694 SUF8tP(UGG)H 72 nt17.42■□□□□ 0.38
CDC48P25694 tP(UGG)LtP(UGG)L 72 nt17.42■□□□□ 0.38
CDC48P25694 SUF7tP(UGG)M 72 nt17.42■□□□□ 0.38
CDC48P25694 tP(UGG)N1tP(UGG)N1 72 nt17.42■□□□□ 0.38
CDC48P25694 tP(UGG)N2tP(UGG)N2 72 nt17.42■□□□□ 0.38
CDC48P25694 tP(UGG)O1tP(UGG)O1 72 nt17.42■□□□□ 0.38
CDC48P25694 SUF11tP(UGG)O2 72 nt17.42■□□□□ 0.38
CDC48P25694 CCC1YLR220W 969 nt17.17■□□□□ 0.34
CDC48P25694 SCJ1YMR214W 1134 nt17.06■□□□□ 0.32
CDC48P25694 ATS1YAL020C 1002 nt16.98■□□□□ 0.31
CDC48P25694 YBR190WYBR190W 312 nt16.78■□□□□ 0.28
CDC48P25694 PET122YER153C 765 nt16.66■□□□□ 0.26
CDC48P25694 tP(UGG)O3tP(UGG)O3 72 nt16.54■□□□□ 0.24
CDC48P25694 SCR1SCR1 522 nt16.53■□□□□ 0.24
CDC48P25694 RVS167YDR388W 1449 nt16.49■□□□□ 0.23
CDC48P25694 RTC3YHR087W 336 nt16.33■□□□□ 0.2
CDC48P25694 RRN5YLR141W 1092 nt16.22■□□□□ 0.19
CDC48P25694 YDJ1YNL064C 1230 nt16.04■□□□□ 0.16
CDC48P25694 SHR5YOL110W 714 nt16■□□□□ 0.15
CDC48P25694 YER088W-BYER088W-B 147 nt15.92■□□□□ 0.14
CDC48P25694 RSB1YOR049C 1065 nt15.9■□□□□ 0.14
CDC48P25694 PST2YDR032C 597 nt15.72■□□□□ 0.11
CDC48P25694 GAR1YHR089C 618 nt15.57■□□□□ 0.08
CDC48P25694 SSA3YBL075C 1950 nt15.51■□□□□ 0.07
CDC48P25694 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
CDC48P25694 URN1YPR152C 1398 nt15.39■□□□□ 0.05
CDC48P25694 YNL208WYNL208W 600 nt15.26■□□□□ 0.03
CDC48P25694 RPN10YHR200W 807 nt15.22■□□□□ 0.03
CDC48P25694 OPI9YLR338W 858 nt15.18■□□□□ 0.02
CDC48P25694 YKL097CYKL097C 411 nt15.14■□□□□ 0.01
CDC48P25694 PUT4YOR348C 1884 nt15.08■□□□□ 0.01
CDC48P25694 TIR1YER011W 765 nt15.06■□□□□ 0
CDC48P25694 SHU1YHL006C 453 nt14.99□□□□□ -0.01
CDC48P25694 SAH1YER043C 1350 nt14.98□□□□□ -0.01
CDC48P25694 ARE1YCR048W 1833 nt14.87□□□□□ -0.03
CDC48P25694 SSA1YAL005C 1929 nt14.86□□□□□ -0.03
CDC48P25694 PUN1YLR414C 792 nt14.73□□□□□ -0.05
CDC48P25694 YJR018WYJR018W 363 nt14.71□□□□□ -0.05
CDC48P25694 SRB2YHR041C 633 nt14.65□□□□□ -0.06
CDC48P25694 YAL037C-BYAL037C-B 975 nt14.64□□□□□ -0.07
CDC48P25694 YHR049C-AYHR049C-A 297 nt14.62□□□□□ -0.07
CDC48P25694 YJR120WYJR120W 351 nt14.58□□□□□ -0.08
CDC48P25694 POA1YBR022W 534 nt14.58□□□□□ -0.08
CDC48P25694 YOR139CYOR139C 393 nt14.54□□□□□ -0.08
CDC48P25694 PTC2YER089C 1395 nt14.48□□□□□ -0.09
CDC48P25694 RPP2BYDR382W 333 nt14.45□□□□□ -0.1
CDC48P25694 WWM1YFL010C 636 nt14.43□□□□□ -0.1
CDC48P25694 YGR021WYGR021W 873 nt14.43□□□□□ -0.1
CDC48P25694 HOM6YJR139C 1080 nt14.4□□□□□ -0.1
CDC48P25694 NPL3YDR432W 1245 nt14.32□□□□□ -0.12
CDC48P25694 MNP1YGL068W 585 nt14.3□□□□□ -0.12
CDC48P25694 NAB2YGL122C 1578 nt14.29□□□□□ -0.12
CDC48P25694 BUD23YCR047C 828 nt14.27□□□□□ -0.13
CDC48P25694 BDH2YAL061W 1254 nt14.24□□□□□ -0.13
CDC48P25694 BSC6YOL137W 1494 nt14.24□□□□□ -0.13
CDC48P25694 YFL021C-AYFL021C-A 855 nt14.22□□□□□ -0.13
CDC48P25694 YOL037CYOL037C 354 nt14.2□□□□□ -0.14
CDC48P25694 INM2YDR287W 879 nt14.19□□□□□ -0.14
CDC48P25694 RKM5YLR137W 1104 nt14.18□□□□□ -0.14
CDC48P25694 DAL1YIR027C 1383 nt14.14□□□□□ -0.15
CDC48P25694 LSM3YLR438C-A 270 nt14.13□□□□□ -0.15
CDC48P25694 FIS1YIL065C 468 nt14.12□□□□□ -0.15
CDC48P25694 YBL100CYBL100C 315 nt14.05□□□□□ -0.16
CDC48P25694 FPR4YLR449W 1179 nt14.03□□□□□ -0.16
CDC48P25694 PHO4YFR034C 939 nt13.99□□□□□ -0.17
CDC48P25694 tM(CAU)CtM(CAU)C 72 nt13.97□□□□□ -0.17
CDC48P25694 IMT4tM(CAU)E 72 nt13.97□□□□□ -0.17
CDC48P25694 IMT3tM(CAU)J3 72 nt13.97□□□□□ -0.17
CDC48P25694 IMT1tM(CAU)O1 72 nt13.97□□□□□ -0.17
CDC48P25694 IMT2tM(CAU)P 72 nt13.97□□□□□ -0.17
CDC48P25694 TRM9YML014W 840 nt13.91□□□□□ -0.18
CDC48P25694 FUN26YAL022C 1554 nt13.91□□□□□ -0.18
CDC48P25694 YLR281CYLR281C 468 nt13.88□□□□□ -0.19
CDC48P25694 CCT6YDR188W 1641 nt13.8□□□□□ -0.2
CDC48P25694 WHI5YOR083W 888 nt13.77□□□□□ -0.21
CDC48P25694 PUS2YGL063W 1113 nt13.75□□□□□ -0.21
CDC48P25694 YPS1YLR120C 1710 nt13.67□□□□□ -0.22
CDC48P25694 YDR095CYDR095C 411 nt13.63□□□□□ -0.23
CDC48P25694 SUF2tP(AGG)C 72 nt13.63□□□□□ -0.23
CDC48P25694 SUF10tP(AGG)N 72 nt13.63□□□□□ -0.23
CDC48P25694 ALF1YNL148C 765 nt13.62□□□□□ -0.23
CDC48P25694 YLR154C-GYLR154C-G 150 nt13.59□□□□□ -0.23
CDC48P25694 SPT5YML010W 3192 nt13.53□□□□□ -0.24
CDC48P25694 YPR011CYPR011C 981 nt13.51□□□□□ -0.25
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