Protein–RNA interactions for Protein: P31376

SWC3, SWR1-complex protein 3, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWC3P31376 YML009W-BYML009W-B 477 nt25.19■■□□□ 1.62
SWC3P31376 NSR1YGR159C 1245 nt24.91■■□□□ 1.58
SWC3P31376 NOP1YDL014W 984 nt24.45■■□□□ 1.5
SWC3P31376 YKL036CYKL036C 393 nt22.75■■□□□ 1.23
SWC3P31376 MDJ1YFL016C 1536 nt22.11■■□□□ 1.13
SWC3P31376 Q0297Q0297 156 nt21.54■■□□□ 1.04
SWC3P31376 SRX1YKL086W 384 nt21.44■■□□□ 1.02
SWC3P31376 YJL027CYJL027C 417 nt21.26■□□□□ 0.99
SWC3P31376 SCS3YGL126W 1143 nt20.84■□□□□ 0.93
SWC3P31376 YCR051WYCR051W 669 nt20.33■□□□□ 0.85
SWC3P31376 YOL085CYOL085C 342 nt19.78■□□□□ 0.76
SWC3P31376 DBP2YNL112W 1641 nt19.68■□□□□ 0.74
SWC3P31376 PKP1YIL042C 1185 nt19.48■□□□□ 0.71
SWC3P31376 TRN1tP(UGG)A 72 nt19.36■□□□□ 0.69
SWC3P31376 SUF9tP(UGG)F 72 nt19.36■□□□□ 0.69
SWC3P31376 SUF8tP(UGG)H 72 nt19.36■□□□□ 0.69
SWC3P31376 tP(UGG)LtP(UGG)L 72 nt19.36■□□□□ 0.69
SWC3P31376 SUF7tP(UGG)M 72 nt19.36■□□□□ 0.69
SWC3P31376 tP(UGG)N1tP(UGG)N1 72 nt19.36■□□□□ 0.69
SWC3P31376 tP(UGG)N2tP(UGG)N2 72 nt19.36■□□□□ 0.69
SWC3P31376 tP(UGG)O1tP(UGG)O1 72 nt19.36■□□□□ 0.69
SWC3P31376 SUF11tP(UGG)O2 72 nt19.36■□□□□ 0.69
SWC3P31376 RPP1BYDL130W 321 nt19.32■□□□□ 0.68
SWC3P31376 CCC1YLR220W 969 nt19.15■□□□□ 0.66
SWC3P31376 YBR190WYBR190W 312 nt18.72■□□□□ 0.59
SWC3P31376 ATS1YAL020C 1002 nt18.66■□□□□ 0.58
SWC3P31376 PET122YER153C 765 nt18.5■□□□□ 0.55
SWC3P31376 SCJ1YMR214W 1134 nt18.5■□□□□ 0.55
SWC3P31376 tP(UGG)O3tP(UGG)O3 72 nt18.35■□□□□ 0.53
SWC3P31376 RTC3YHR087W 336 nt18.29■□□□□ 0.52
SWC3P31376 RVS167YDR388W 1449 nt18.29■□□□□ 0.52
SWC3P31376 SCR1SCR1 522 nt18.19■□□□□ 0.5
SWC3P31376 RRN5YLR141W 1092 nt17.98■□□□□ 0.47
SWC3P31376 SHR5YOL110W 714 nt17.77■□□□□ 0.44
SWC3P31376 YDJ1YNL064C 1230 nt17.71■□□□□ 0.43
SWC3P31376 YER088W-BYER088W-B 147 nt17.63■□□□□ 0.41
SWC3P31376 RSB1YOR049C 1065 nt17.57■□□□□ 0.4
SWC3P31376 GAR1YHR089C 618 nt17.33■□□□□ 0.36
SWC3P31376 PST2YDR032C 597 nt17.3■□□□□ 0.36
SWC3P31376 DEP1YAL013W 1218 nt17.29■□□□□ 0.36
SWC3P31376 URN1YPR152C 1398 nt17.22■□□□□ 0.35
SWC3P31376 PUT4YOR348C 1884 nt17.02■□□□□ 0.32
SWC3P31376 YNL208WYNL208W 600 nt16.95■□□□□ 0.3
SWC3P31376 OPI9YLR338W 858 nt16.93■□□□□ 0.3
SWC3P31376 RPN10YHR200W 807 nt16.85■□□□□ 0.29
SWC3P31376 SAH1YER043C 1350 nt16.84■□□□□ 0.29
SWC3P31376 ARE1YCR048W 1833 nt16.76■□□□□ 0.27
SWC3P31376 TIR1YER011W 765 nt16.73■□□□□ 0.27
SWC3P31376 SSA1YAL005C 1929 nt16.59■□□□□ 0.25
SWC3P31376 SHU1YHL006C 453 nt16.58■□□□□ 0.24
SWC3P31376 YKL097CYKL097C 411 nt16.58■□□□□ 0.24
SWC3P31376 SRB2YHR041C 633 nt16.47■□□□□ 0.23
SWC3P31376 YHR049C-AYHR049C-A 297 nt16.47■□□□□ 0.23
SWC3P31376 POA1YBR022W 534 nt16.46■□□□□ 0.23
SWC3P31376 YJR018WYJR018W 363 nt16.41■□□□□ 0.22
SWC3P31376 PUN1YLR414C 792 nt16.39■□□□□ 0.21
SWC3P31376 YJR120WYJR120W 351 nt16.36■□□□□ 0.21
SWC3P31376 YAL037C-BYAL037C-B 975 nt16.31■□□□□ 0.2
SWC3P31376 PTC2YER089C 1395 nt16.25■□□□□ 0.19
SWC3P31376 BSC6YOL137W 1494 nt16.08■□□□□ 0.16
SWC3P31376 WWM1YFL010C 636 nt16.07■□□□□ 0.16
SWC3P31376 BUD23YCR047C 828 nt16.06■□□□□ 0.16
SWC3P31376 YOR139CYOR139C 393 nt16.04■□□□□ 0.16
SWC3P31376 RPP2BYDR382W 333 nt16.02■□□□□ 0.16
SWC3P31376 SSA3YBL075C 1950 nt16.01■□□□□ 0.15
SWC3P31376 NAB2YGL122C 1578 nt15.96■□□□□ 0.15
SWC3P31376 HOM6YJR139C 1080 nt15.96■□□□□ 0.15
SWC3P31376 MNP1YGL068W 585 nt15.93■□□□□ 0.14
SWC3P31376 YGR021WYGR021W 873 nt15.88■□□□□ 0.13
SWC3P31376 FIS1YIL065C 468 nt15.85■□□□□ 0.13
SWC3P31376 BDH2YAL061W 1254 nt15.81■□□□□ 0.12
SWC3P31376 DAL1YIR027C 1383 nt15.8■□□□□ 0.12
SWC3P31376 INM2YDR287W 879 nt15.76■□□□□ 0.11
SWC3P31376 FPR4YLR449W 1179 nt15.74■□□□□ 0.11
SWC3P31376 YFL021C-AYFL021C-A 855 nt15.72■□□□□ 0.11
SWC3P31376 NPL3YDR432W 1245 nt15.71■□□□□ 0.11
SWC3P31376 RKM5YLR137W 1104 nt15.7■□□□□ 0.1
SWC3P31376 YBL100CYBL100C 315 nt15.68■□□□□ 0.1
SWC3P31376 PHO4YFR034C 939 nt15.67■□□□□ 0.1
SWC3P31376 LSM3YLR438C-A 270 nt15.61■□□□□ 0.09
SWC3P31376 YOL037CYOL037C 354 nt15.58■□□□□ 0.08
SWC3P31376 FUN26YAL022C 1554 nt15.53■□□□□ 0.08
SWC3P31376 TRM9YML014W 840 nt15.45■□□□□ 0.06
SWC3P31376 tM(CAU)CtM(CAU)C 72 nt15.38■□□□□ 0.05
SWC3P31376 IMT4tM(CAU)E 72 nt15.38■□□□□ 0.05
SWC3P31376 IMT3tM(CAU)J3 72 nt15.38■□□□□ 0.05
SWC3P31376 IMT1tM(CAU)O1 72 nt15.38■□□□□ 0.05
SWC3P31376 IMT2tM(CAU)P 72 nt15.38■□□□□ 0.05
SWC3P31376 SPT5YML010W 3192 nt15.38■□□□□ 0.05
SWC3P31376 CCT6YDR188W 1641 nt15.35■□□□□ 0.05
SWC3P31376 YPS1YLR120C 1710 nt15.34■□□□□ 0.05
SWC3P31376 YLR281CYLR281C 468 nt15.3■□□□□ 0.04
SWC3P31376 YDR095CYDR095C 411 nt15.26■□□□□ 0.03
SWC3P31376 WHI5YOR083W 888 nt15.23■□□□□ 0.03
SWC3P31376 PUS2YGL063W 1113 nt15.18■□□□□ 0.02
SWC3P31376 ALF1YNL148C 765 nt15.17■□□□□ 0.02
SWC3P31376 SUF2tP(AGG)C 72 nt15.09■□□□□ 0.01
SWC3P31376 SUF10tP(AGG)N 72 nt15.09■□□□□ 0.01
SWC3P31376 YHR165W-AYHR165W-A 312 nt15.09■□□□□ 0.01
SWC3P31376 YLR154C-GYLR154C-G 150 nt15.08■□□□□ 0
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms