Protein–RNA interactions for Protein: P51534

SHE4, SWI5-dependent HO expression protein 4, yeastyeast

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE4P51534 NSR1YGR159C 1245 nt18.57■□□□□ 0.56
SHE4P51534 YML009W-BYML009W-B 477 nt18.48■□□□□ 0.55
SHE4P51534 NOP1YDL014W 984 nt17.95■□□□□ 0.46
SHE4P51534 MDJ1YFL016C 1536 nt16.93■□□□□ 0.3
SHE4P51534 YKL036CYKL036C 393 nt16.44■□□□□ 0.22
SHE4P51534 Q0297Q0297 156 nt15.73■□□□□ 0.11
SHE4P51534 SRX1YKL086W 384 nt15.72■□□□□ 0.11
SHE4P51534 YJL027CYJL027C 417 nt15.58■□□□□ 0.08
SHE4P51534 SSA3YBL075C 1950 nt15.54■□□□□ 0.08
SHE4P51534 SCS3YGL126W 1143 nt14.91□□□□□ -0.02
SHE4P51534 YCR051WYCR051W 669 nt14.81□□□□□ -0.04
SHE4P51534 YBR190WYBR190W 312 nt14.71□□□□□ -0.05
SHE4P51534 DBP2YNL112W 1641 nt14.68□□□□□ -0.06
SHE4P51534 TRN1tP(UGG)A 72 nt14.31□□□□□ -0.12
SHE4P51534 SUF9tP(UGG)F 72 nt14.31□□□□□ -0.12
SHE4P51534 SUF8tP(UGG)H 72 nt14.31□□□□□ -0.12
SHE4P51534 tP(UGG)LtP(UGG)L 72 nt14.31□□□□□ -0.12
SHE4P51534 SUF7tP(UGG)M 72 nt14.31□□□□□ -0.12
SHE4P51534 tP(UGG)N1tP(UGG)N1 72 nt14.31□□□□□ -0.12
SHE4P51534 tP(UGG)N2tP(UGG)N2 72 nt14.31□□□□□ -0.12
SHE4P51534 tP(UGG)O1tP(UGG)O1 72 nt14.31□□□□□ -0.12
SHE4P51534 SUF11tP(UGG)O2 72 nt14.31□□□□□ -0.12
SHE4P51534 RTC3YHR087W 336 nt14.29□□□□□ -0.12
SHE4P51534 YOL085CYOL085C 342 nt14.26□□□□□ -0.13
SHE4P51534 RPP1BYDL130W 321 nt14.08□□□□□ -0.16
SHE4P51534 CCC1YLR220W 969 nt14.04□□□□□ -0.16
SHE4P51534 PKP1YIL042C 1185 nt13.99□□□□□ -0.17
SHE4P51534 PUT4YOR348C 1884 nt13.97□□□□□ -0.17
SHE4P51534 RVS167YDR388W 1449 nt13.69□□□□□ -0.22
SHE4P51534 SCJ1YMR214W 1134 nt13.65□□□□□ -0.22
SHE4P51534 tP(UGG)O3tP(UGG)O3 72 nt13.46□□□□□ -0.25
SHE4P51534 ARE1YCR048W 1833 nt13.46□□□□□ -0.26
SHE4P51534 PET122YER153C 765 nt13.45□□□□□ -0.26
SHE4P51534 POA1YBR022W 534 nt13.43□□□□□ -0.26
SHE4P51534 SPT5YML010W 3192 nt13.35□□□□□ -0.27
SHE4P51534 BSC6YOL137W 1494 nt13.32□□□□□ -0.28
SHE4P51534 ATS1YAL020C 1002 nt13.3□□□□□ -0.28
SHE4P51534 YHR049C-AYHR049C-A 297 nt13.28□□□□□ -0.28
SHE4P51534 SSA4YER103W 1929 nt13.28□□□□□ -0.28
SHE4P51534 SCR1SCR1 522 nt13.24□□□□□ -0.29
SHE4P51534 SHR5YOL110W 714 nt13.22□□□□□ -0.29
SHE4P51534 PAC11YDR488C 1602 nt13.2□□□□□ -0.3
SHE4P51534 SAH1YER043C 1350 nt13.19□□□□□ -0.3
SHE4P51534 URN1YPR152C 1398 nt13.09□□□□□ -0.31
SHE4P51534 OPI9YLR338W 858 nt13.09□□□□□ -0.31
SHE4P51534 NVJ2YPR091C 2313 nt13.06□□□□□ -0.32
SHE4P51534 YDJ1YNL064C 1230 nt13.06□□□□□ -0.32
SHE4P51534 RRN5YLR141W 1092 nt13.03□□□□□ -0.32
SHE4P51534 BUD23YCR047C 828 nt12.88□□□□□ -0.35
SHE4P51534 BDF1YLR399C 2061 nt12.87□□□□□ -0.35
SHE4P51534 YER088W-BYER088W-B 147 nt12.81□□□□□ -0.36
SHE4P51534 DEP1YAL013W 1218 nt12.81□□□□□ -0.36
SHE4P51534 RPN10YHR200W 807 nt12.77□□□□□ -0.37
SHE4P51534 FPS1YLL043W 2010 nt12.76□□□□□ -0.37
SHE4P51534 PUN1YLR414C 792 nt12.73□□□□□ -0.37
SHE4P51534 GAR1YHR089C 618 nt12.71□□□□□ -0.37
SHE4P51534 TAT1YBR069C 1860 nt12.7□□□□□ -0.38
SHE4P51534 RSB1YOR049C 1065 nt12.69□□□□□ -0.38
SHE4P51534 YNL208WYNL208W 600 nt12.66□□□□□ -0.38
SHE4P51534 PTC2YER089C 1395 nt12.66□□□□□ -0.38
SHE4P51534 NAB2YGL122C 1578 nt12.65□□□□□ -0.38
SHE4P51534 MEP2YNL142W 1500 nt12.61□□□□□ -0.39
SHE4P51534 YJR018WYJR018W 363 nt12.44□□□□□ -0.42
SHE4P51534 FIS1YIL065C 468 nt12.39□□□□□ -0.43
SHE4P51534 PST2YDR032C 597 nt12.37□□□□□ -0.43
SHE4P51534 DCW1YKL046C 1350 nt12.34□□□□□ -0.43
SHE4P51534 TIR1YER011W 765 nt12.32□□□□□ -0.44
SHE4P51534 DAL1YIR027C 1383 nt12.31□□□□□ -0.44
SHE4P51534 SSA1YAL005C 1929 nt12.3□□□□□ -0.44
SHE4P51534 Q0182Q0182 405 nt12.28□□□□□ -0.44
SHE4P51534 YPS1YLR120C 1710 nt12.26□□□□□ -0.45
SHE4P51534 YBR220CYBR220C 1683 nt12.26□□□□□ -0.45
SHE4P51534 YMR090WYMR090W 684 nt12.22□□□□□ -0.45
SHE4P51534 FPR4YLR449W 1179 nt12.21□□□□□ -0.45
SHE4P51534 PHO4YFR034C 939 nt12.2□□□□□ -0.46
SHE4P51534 EMI2YDR516C 1503 nt12.19□□□□□ -0.46
SHE4P51534 YJR120WYJR120W 351 nt12.18□□□□□ -0.46
SHE4P51534 YHR165W-AYHR165W-A 312 nt12.16□□□□□ -0.46
SHE4P51534 INM2YDR287W 879 nt12.13□□□□□ -0.47
SHE4P51534 SDH1YKL148C 1923 nt12.06□□□□□ -0.48
SHE4P51534 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
SHE4P51534 YDL221WYDL221W 552 nt12.05□□□□□ -0.48
SHE4P51534 UME6YDR207C 2511 nt12.04□□□□□ -0.48
SHE4P51534 PCH2YBR186W 1695 nt12.03□□□□□ -0.48
SHE4P51534 SRB2YHR041C 633 nt12.02□□□□□ -0.49
SHE4P51534 RPP2BYDR382W 333 nt12□□□□□ -0.49
SHE4P51534 SEC11YIR022W 504 nt11.99□□□□□ -0.49
SHE4P51534 GUT2YIL155C 1950 nt11.98□□□□□ -0.49
SHE4P51534 YJL225CYJL225C 5277 nt11.92□□□□□ -0.5
SHE4P51534 SHU1YHL006C 453 nt11.87□□□□□ -0.51
SHE4P51534 YBL100CYBL100C 315 nt11.87□□□□□ -0.51
SHE4P51534 CAC2YML102W 1407 nt11.86□□□□□ -0.51
SHE4P51534 SCC4YER147C 1875 nt11.85□□□□□ -0.51
SHE4P51534 PTP1YDL230W 1008 nt11.84□□□□□ -0.51
SHE4P51534 RPP2AYOL039W 321 nt11.82□□□□□ -0.52
SHE4P51534 BDH2YAL061W 1254 nt11.78□□□□□ -0.52
SHE4P51534 PIB2YGL023C 1908 nt11.76□□□□□ -0.53
SHE4P51534 YKL097CYKL097C 411 nt11.75□□□□□ -0.53
SHE4P51534 WWM1YFL010C 636 nt11.74□□□□□ -0.53
SHE4P51534 IRC15YPL017C 1500 nt11.71□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms