Protein–RNA interactions for Protein: P36113

HEL1, E3 ubiquitin-protein ligase HEL1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HEL1P36113 YML009W-BYML009W-B 477 nt21.98■■□□□ 1.11
HEL1P36113 NSR1YGR159C 1245 nt21.6■■□□□ 1.05
HEL1P36113 NOP1YDL014W 984 nt21.48■■□□□ 1.03
HEL1P36113 YKL036CYKL036C 393 nt20.09■□□□□ 0.81
HEL1P36113 MDJ1YFL016C 1536 nt18.93■□□□□ 0.62
HEL1P36113 Q0297Q0297 156 nt18.91■□□□□ 0.62
HEL1P36113 YJL027CYJL027C 417 nt18.79■□□□□ 0.6
HEL1P36113 SRX1YKL086W 384 nt18.78■□□□□ 0.6
HEL1P36113 SCS3YGL126W 1143 nt18.44■□□□□ 0.54
HEL1P36113 YCR051WYCR051W 669 nt17.81■□□□□ 0.44
HEL1P36113 YOL085CYOL085C 342 nt17.39■□□□□ 0.37
HEL1P36113 PKP1YIL042C 1185 nt17.08■□□□□ 0.32
HEL1P36113 RPP1BYDL130W 321 nt16.97■□□□□ 0.31
HEL1P36113 DBP2YNL112W 1641 nt16.88■□□□□ 0.29
HEL1P36113 TRN1tP(UGG)A 72 nt16.84■□□□□ 0.29
HEL1P36113 SUF9tP(UGG)F 72 nt16.84■□□□□ 0.29
HEL1P36113 SUF8tP(UGG)H 72 nt16.84■□□□□ 0.29
HEL1P36113 tP(UGG)LtP(UGG)L 72 nt16.84■□□□□ 0.29
HEL1P36113 SUF7tP(UGG)M 72 nt16.84■□□□□ 0.29
HEL1P36113 tP(UGG)N1tP(UGG)N1 72 nt16.84■□□□□ 0.29
HEL1P36113 tP(UGG)N2tP(UGG)N2 72 nt16.84■□□□□ 0.29
HEL1P36113 tP(UGG)O1tP(UGG)O1 72 nt16.84■□□□□ 0.29
HEL1P36113 SUF11tP(UGG)O2 72 nt16.84■□□□□ 0.29
HEL1P36113 SCJ1YMR214W 1134 nt16.69■□□□□ 0.26
HEL1P36113 CCC1YLR220W 969 nt16.61■□□□□ 0.25
HEL1P36113 ATS1YAL020C 1002 nt16.55■□□□□ 0.24
HEL1P36113 PET122YER153C 765 nt16.18■□□□□ 0.18
HEL1P36113 SCR1SCR1 522 nt16.07■□□□□ 0.16
HEL1P36113 YBR190WYBR190W 312 nt16.06■□□□□ 0.16
HEL1P36113 SSA3YBL075C 1950 nt16.01■□□□□ 0.15
HEL1P36113 tP(UGG)O3tP(UGG)O3 72 nt16.01■□□□□ 0.15
HEL1P36113 RVS167YDR388W 1449 nt15.91■□□□□ 0.14
HEL1P36113 RRN5YLR141W 1092 nt15.72■□□□□ 0.11
HEL1P36113 RTC3YHR087W 336 nt15.69■□□□□ 0.1
HEL1P36113 YDJ1YNL064C 1230 nt15.48■□□□□ 0.07
HEL1P36113 RSB1YOR049C 1065 nt15.48■□□□□ 0.07
HEL1P36113 SHR5YOL110W 714 nt15.44■□□□□ 0.06
HEL1P36113 YER088W-BYER088W-B 147 nt15.43■□□□□ 0.06
HEL1P36113 PST2YDR032C 597 nt15.29■□□□□ 0.04
HEL1P36113 GAR1YHR089C 618 nt15.07■□□□□ 0
HEL1P36113 PUT4YOR348C 1884 nt14.94□□□□□ -0.02
HEL1P36113 DEP1YAL013W 1218 nt14.87□□□□□ -0.03
HEL1P36113 YKL097CYKL097C 411 nt14.83□□□□□ -0.04
HEL1P36113 URN1YPR152C 1398 nt14.82□□□□□ -0.04
HEL1P36113 YNL208WYNL208W 600 nt14.7□□□□□ -0.06
HEL1P36113 RPN10YHR200W 807 nt14.66□□□□□ -0.06
HEL1P36113 SHU1YHL006C 453 nt14.6□□□□□ -0.07
HEL1P36113 TIR1YER011W 765 nt14.57□□□□□ -0.08
HEL1P36113 OPI9YLR338W 858 nt14.55□□□□□ -0.08
HEL1P36113 ARE1YCR048W 1833 nt14.41□□□□□ -0.1
HEL1P36113 SAH1YER043C 1350 nt14.38□□□□□ -0.11
HEL1P36113 POA1YBR022W 534 nt14.37□□□□□ -0.11
HEL1P36113 SSA1YAL005C 1929 nt14.34□□□□□ -0.11
HEL1P36113 SPT5YML010W 3192 nt14.3□□□□□ -0.12
HEL1P36113 YAL037C-BYAL037C-B 975 nt14.26□□□□□ -0.13
HEL1P36113 BSC6YOL137W 1494 nt14.23□□□□□ -0.13
HEL1P36113 YOR139CYOR139C 393 nt14.2□□□□□ -0.14
HEL1P36113 YHR049C-AYHR049C-A 297 nt14.19□□□□□ -0.14
HEL1P36113 SRB2YHR041C 633 nt14.17□□□□□ -0.14
HEL1P36113 YJR018WYJR018W 363 nt14.15□□□□□ -0.14
HEL1P36113 PUN1YLR414C 792 nt14.13□□□□□ -0.15
HEL1P36113 SSA4YER103W 1929 nt14.13□□□□□ -0.15
HEL1P36113 YJR120WYJR120W 351 nt14.04□□□□□ -0.16
HEL1P36113 YGR021WYGR021W 873 nt14□□□□□ -0.17
HEL1P36113 NPL3YDR432W 1245 nt13.99□□□□□ -0.17
HEL1P36113 WWM1YFL010C 636 nt13.97□□□□□ -0.17
HEL1P36113 HOM6YJR139C 1080 nt13.97□□□□□ -0.17
HEL1P36113 RPP2BYDR382W 333 nt13.94□□□□□ -0.18
HEL1P36113 MNP1YGL068W 585 nt13.94□□□□□ -0.18
HEL1P36113 PTC2YER089C 1395 nt13.89□□□□□ -0.19
HEL1P36113 YOL037CYOL037C 354 nt13.83□□□□□ -0.2
HEL1P36113 BUD23YCR047C 828 nt13.76□□□□□ -0.21
HEL1P36113 YFL021C-AYFL021C-A 855 nt13.76□□□□□ -0.21
HEL1P36113 RKM5YLR137W 1104 nt13.76□□□□□ -0.21
HEL1P36113 BDH2YAL061W 1254 nt13.72□□□□□ -0.21
HEL1P36113 BDF1YLR399C 2061 nt13.71□□□□□ -0.21
HEL1P36113 NAB2YGL122C 1578 nt13.69□□□□□ -0.22
HEL1P36113 tM(CAU)CtM(CAU)C 72 nt13.61□□□□□ -0.23
HEL1P36113 IMT4tM(CAU)E 72 nt13.61□□□□□ -0.23
HEL1P36113 IMT3tM(CAU)J3 72 nt13.61□□□□□ -0.23
HEL1P36113 IMT1tM(CAU)O1 72 nt13.61□□□□□ -0.23
HEL1P36113 IMT2tM(CAU)P 72 nt13.61□□□□□ -0.23
HEL1P36113 INM2YDR287W 879 nt13.6□□□□□ -0.23
HEL1P36113 LSM3YLR438C-A 270 nt13.59□□□□□ -0.23
HEL1P36113 DAL1YIR027C 1383 nt13.58□□□□□ -0.24
HEL1P36113 FIS1YIL065C 468 nt13.57□□□□□ -0.24
HEL1P36113 YBL100CYBL100C 315 nt13.54□□□□□ -0.24
HEL1P36113 FPR4YLR449W 1179 nt13.5□□□□□ -0.25
HEL1P36113 TAT1YBR069C 1860 nt13.5□□□□□ -0.25
HEL1P36113 YLR281CYLR281C 468 nt13.46□□□□□ -0.25
HEL1P36113 PHO4YFR034C 939 nt13.45□□□□□ -0.26
HEL1P36113 MEP2YNL142W 1500 nt13.44□□□□□ -0.26
HEL1P36113 PUS2YGL063W 1113 nt13.4□□□□□ -0.26
HEL1P36113 FUN26YAL022C 1554 nt13.39□□□□□ -0.27
HEL1P36113 TRM9YML014W 840 nt13.38□□□□□ -0.27
HEL1P36113 WHI5YOR083W 888 nt13.37□□□□□ -0.27
HEL1P36113 CCT6YDR188W 1641 nt13.28□□□□□ -0.28
HEL1P36113 PAC11YDR488C 1602 nt13.26□□□□□ -0.29
HEL1P36113 DCW1YKL046C 1350 nt13.24□□□□□ -0.29
HEL1P36113 MOT3YMR070W 1473 nt13.21□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms