Protein–RNA interactions for Protein: P32338

RME1, Zinc finger protein RME1, yeastyeast

Known RBP Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RME1P32338 YML009W-BYML009W-B 477 nt22.7■■□□□ 1.22
RME1P32338 NSR1YGR159C 1245 nt22.24■■□□□ 1.15
RME1P32338 NOP1YDL014W 984 nt22.17■■□□□ 1.14
RME1P32338 YKL036CYKL036C 393 nt20.71■□□□□ 0.91
RME1P32338 MDJ1YFL016C 1536 nt19.5■□□□□ 0.71
RME1P32338 YJL027CYJL027C 417 nt19.44■□□□□ 0.7
RME1P32338 Q0297Q0297 156 nt19.42■□□□□ 0.7
RME1P32338 SRX1YKL086W 384 nt19.32■□□□□ 0.68
RME1P32338 SCS3YGL126W 1143 nt18.95■□□□□ 0.62
RME1P32338 YCR051WYCR051W 669 nt18.47■□□□□ 0.55
RME1P32338 YOL085CYOL085C 342 nt17.92■□□□□ 0.46
RME1P32338 PKP1YIL042C 1185 nt17.69■□□□□ 0.42
RME1P32338 RPP1BYDL130W 321 nt17.46■□□□□ 0.39
RME1P32338 DBP2YNL112W 1641 nt17.28■□□□□ 0.36
RME1P32338 TRN1tP(UGG)A 72 nt17.26■□□□□ 0.35
RME1P32338 SUF9tP(UGG)F 72 nt17.26■□□□□ 0.35
RME1P32338 SUF8tP(UGG)H 72 nt17.26■□□□□ 0.35
RME1P32338 tP(UGG)LtP(UGG)L 72 nt17.26■□□□□ 0.35
RME1P32338 SUF7tP(UGG)M 72 nt17.26■□□□□ 0.35
RME1P32338 tP(UGG)N1tP(UGG)N1 72 nt17.26■□□□□ 0.35
RME1P32338 tP(UGG)N2tP(UGG)N2 72 nt17.26■□□□□ 0.35
RME1P32338 tP(UGG)O1tP(UGG)O1 72 nt17.26■□□□□ 0.35
RME1P32338 SUF11tP(UGG)O2 72 nt17.26■□□□□ 0.35
RME1P32338 CCC1YLR220W 969 nt17.26■□□□□ 0.35
RME1P32338 SCJ1YMR214W 1134 nt17.12■□□□□ 0.33
RME1P32338 ATS1YAL020C 1002 nt17.05■□□□□ 0.32
RME1P32338 PET122YER153C 765 nt16.65■□□□□ 0.26
RME1P32338 SCR1SCR1 522 nt16.62■□□□□ 0.25
RME1P32338 YBR190WYBR190W 312 nt16.52■□□□□ 0.24
RME1P32338 tP(UGG)O3tP(UGG)O3 72 nt16.49■□□□□ 0.23
RME1P32338 RVS167YDR388W 1449 nt16.45■□□□□ 0.22
RME1P32338 RTC3YHR087W 336 nt16.31■□□□□ 0.2
RME1P32338 RRN5YLR141W 1092 nt16.25■□□□□ 0.19
RME1P32338 RSB1YOR049C 1065 nt16.04■□□□□ 0.16
RME1P32338 YDJ1YNL064C 1230 nt15.91■□□□□ 0.14
RME1P32338 YER088W-BYER088W-B 147 nt15.9■□□□□ 0.14
RME1P32338 SHR5YOL110W 714 nt15.88■□□□□ 0.13
RME1P32338 PST2YDR032C 597 nt15.71■□□□□ 0.11
RME1P32338 GAR1YHR089C 618 nt15.61■□□□□ 0.09
RME1P32338 DEP1YAL013W 1218 nt15.43■□□□□ 0.06
RME1P32338 YKL097CYKL097C 411 nt15.31■□□□□ 0.04
RME1P32338 SSA3YBL075C 1950 nt15.31■□□□□ 0.04
RME1P32338 URN1YPR152C 1398 nt15.29■□□□□ 0.04
RME1P32338 YNL208WYNL208W 600 nt15.16■□□□□ 0.02
RME1P32338 RPN10YHR200W 807 nt15.15■□□□□ 0.02
RME1P32338 SHU1YHL006C 453 nt15.03■□□□□ -0
RME1P32338 TIR1YER011W 765 nt15.02■□□□□ -0
RME1P32338 OPI9YLR338W 858 nt14.96□□□□□ -0.01
RME1P32338 SAH1YER043C 1350 nt14.84□□□□□ -0.03
RME1P32338 YAL037C-BYAL037C-B 975 nt14.79□□□□□ -0.04
RME1P32338 SSA1YAL005C 1929 nt14.74□□□□□ -0.05
RME1P32338 PUT4YOR348C 1884 nt14.72□□□□□ -0.05
RME1P32338 YJR018WYJR018W 363 nt14.62□□□□□ -0.07
RME1P32338 YOR139CYOR139C 393 nt14.57□□□□□ -0.08
RME1P32338 PUN1YLR414C 792 nt14.56□□□□□ -0.08
RME1P32338 ARE1YCR048W 1833 nt14.55□□□□□ -0.08
RME1P32338 SRB2YHR041C 633 nt14.51□□□□□ -0.09
RME1P32338 NPL3YDR432W 1245 nt14.48□□□□□ -0.09
RME1P32338 RPP2BYDR382W 333 nt14.44□□□□□ -0.1
RME1P32338 YHR049C-AYHR049C-A 297 nt14.43□□□□□ -0.1
RME1P32338 WWM1YFL010C 636 nt14.41□□□□□ -0.1
RME1P32338 POA1YBR022W 534 nt14.41□□□□□ -0.1
RME1P32338 YGR021WYGR021W 873 nt14.39□□□□□ -0.11
RME1P32338 PTC2YER089C 1395 nt14.35□□□□□ -0.11
RME1P32338 MNP1YGL068W 585 nt14.34□□□□□ -0.11
RME1P32338 HOM6YJR139C 1080 nt14.33□□□□□ -0.12
RME1P32338 YJR120WYJR120W 351 nt14.32□□□□□ -0.12
RME1P32338 BUD23YCR047C 828 nt14.21□□□□□ -0.13
RME1P32338 YOL037CYOL037C 354 nt14.19□□□□□ -0.14
RME1P32338 YFL021C-AYFL021C-A 855 nt14.14□□□□□ -0.15
RME1P32338 RKM5YLR137W 1104 nt14.14□□□□□ -0.15
RME1P32338 BDH2YAL061W 1254 nt14.13□□□□□ -0.15
RME1P32338 NAB2YGL122C 1578 nt14.09□□□□□ -0.15
RME1P32338 FPR4YLR449W 1179 nt14.08□□□□□ -0.16
RME1P32338 INM2YDR287W 879 nt14.06□□□□□ -0.16
RME1P32338 tM(CAU)CtM(CAU)C 72 nt14.01□□□□□ -0.17
RME1P32338 IMT4tM(CAU)E 72 nt14.01□□□□□ -0.17
RME1P32338 IMT3tM(CAU)J3 72 nt14.01□□□□□ -0.17
RME1P32338 IMT1tM(CAU)O1 72 nt14.01□□□□□ -0.17
RME1P32338 IMT2tM(CAU)P 72 nt14.01□□□□□ -0.17
RME1P32338 LSM3YLR438C-A 270 nt13.99□□□□□ -0.17
RME1P32338 BSC6YOL137W 1494 nt13.98□□□□□ -0.17
RME1P32338 DAL1YIR027C 1383 nt13.96□□□□□ -0.17
RME1P32338 YBL100CYBL100C 315 nt13.96□□□□□ -0.17
RME1P32338 PUS2YGL063W 1113 nt13.89□□□□□ -0.19
RME1P32338 TRM9YML014W 840 nt13.89□□□□□ -0.19
RME1P32338 FIS1YIL065C 468 nt13.84□□□□□ -0.19
RME1P32338 YLR281CYLR281C 468 nt13.84□□□□□ -0.19
RME1P32338 PHO4YFR034C 939 nt13.81□□□□□ -0.2
RME1P32338 FUN26YAL022C 1554 nt13.8□□□□□ -0.2
RME1P32338 WHI5YOR083W 888 nt13.8□□□□□ -0.2
RME1P32338 ALF1YNL148C 765 nt13.63□□□□□ -0.23
RME1P32338 CCT6YDR188W 1641 nt13.61□□□□□ -0.23
RME1P32338 MOT3YMR070W 1473 nt13.57□□□□□ -0.24
RME1P32338 YLR154C-GYLR154C-G 150 nt13.57□□□□□ -0.24
RME1P32338 SUF2tP(AGG)C 72 nt13.56□□□□□ -0.24
RME1P32338 SUF10tP(AGG)N 72 nt13.56□□□□□ -0.24
RME1P32338 FMP45YDL222C 930 nt13.53□□□□□ -0.24
RME1P32338 DSK2YMR276W 1122 nt13.52□□□□□ -0.25
RME1P32338 YJL152WYJL152W 360 nt13.5□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms