Protein–RNA interactions for Protein: Q08230

SDH5, Succinate dehydrogenase assembly factor 2, mitochondrial, yeastyeast

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDH5Q08230 YML009W-BYML009W-B 477 nt21.92■■□□□ 1.1
SDH5Q08230 NSR1YGR159C 1245 nt21.55■■□□□ 1.04
SDH5Q08230 NOP1YDL014W 984 nt21.54■■□□□ 1.04
SDH5Q08230 YKL036CYKL036C 393 nt20.06■□□□□ 0.8
SDH5Q08230 Q0297Q0297 156 nt18.84■□□□□ 0.61
SDH5Q08230 YJL027CYJL027C 417 nt18.79■□□□□ 0.6
SDH5Q08230 MDJ1YFL016C 1536 nt18.75■□□□□ 0.59
SDH5Q08230 SRX1YKL086W 384 nt18.72■□□□□ 0.59
SDH5Q08230 SCS3YGL126W 1143 nt18.31■□□□□ 0.52
SDH5Q08230 YCR051WYCR051W 669 nt17.81■□□□□ 0.44
SDH5Q08230 YOL085CYOL085C 342 nt17.29■□□□□ 0.36
SDH5Q08230 PKP1YIL042C 1185 nt16.96■□□□□ 0.31
SDH5Q08230 RPP1BYDL130W 321 nt16.92■□□□□ 0.3
SDH5Q08230 TRN1tP(UGG)A 72 nt16.72■□□□□ 0.27
SDH5Q08230 SUF9tP(UGG)F 72 nt16.72■□□□□ 0.27
SDH5Q08230 SUF8tP(UGG)H 72 nt16.72■□□□□ 0.27
SDH5Q08230 tP(UGG)LtP(UGG)L 72 nt16.72■□□□□ 0.27
SDH5Q08230 SUF7tP(UGG)M 72 nt16.72■□□□□ 0.27
SDH5Q08230 tP(UGG)N1tP(UGG)N1 72 nt16.72■□□□□ 0.27
SDH5Q08230 tP(UGG)N2tP(UGG)N2 72 nt16.72■□□□□ 0.27
SDH5Q08230 tP(UGG)O1tP(UGG)O1 72 nt16.72■□□□□ 0.27
SDH5Q08230 SUF11tP(UGG)O2 72 nt16.72■□□□□ 0.27
SDH5Q08230 SCJ1YMR214W 1134 nt16.7■□□□□ 0.26
SDH5Q08230 DBP2YNL112W 1641 nt16.64■□□□□ 0.25
SDH5Q08230 CCC1YLR220W 969 nt16.58■□□□□ 0.24
SDH5Q08230 ATS1YAL020C 1002 nt16.48■□□□□ 0.23
SDH5Q08230 SCR1SCR1 522 nt16.14■□□□□ 0.17
SDH5Q08230 YBR190WYBR190W 312 nt16.1■□□□□ 0.17
SDH5Q08230 PET122YER153C 765 nt16.06■□□□□ 0.16
SDH5Q08230 RVS167YDR388W 1449 nt16■□□□□ 0.15
SDH5Q08230 tP(UGG)O3tP(UGG)O3 72 nt15.92■□□□□ 0.14
SDH5Q08230 SSA3YBL075C 1950 nt15.92■□□□□ 0.14
SDH5Q08230 RTC3YHR087W 336 nt15.71■□□□□ 0.11
SDH5Q08230 RRN5YLR141W 1092 nt15.64■□□□□ 0.09
SDH5Q08230 RSB1YOR049C 1065 nt15.48■□□□□ 0.07
SDH5Q08230 YDJ1YNL064C 1230 nt15.44■□□□□ 0.06
SDH5Q08230 SHR5YOL110W 714 nt15.4■□□□□ 0.06
SDH5Q08230 YER088W-BYER088W-B 147 nt15.33■□□□□ 0.04
SDH5Q08230 PUT4YOR348C 1884 nt15.23■□□□□ 0.03
SDH5Q08230 PST2YDR032C 597 nt15.17■□□□□ 0.02
SDH5Q08230 GAR1YHR089C 618 nt15.02■□□□□ -0
SDH5Q08230 YKL097CYKL097C 411 nt14.83□□□□□ -0.04
SDH5Q08230 DEP1YAL013W 1218 nt14.79□□□□□ -0.04
SDH5Q08230 URN1YPR152C 1398 nt14.76□□□□□ -0.05
SDH5Q08230 RPN10YHR200W 807 nt14.76□□□□□ -0.05
SDH5Q08230 ARE1YCR048W 1833 nt14.75□□□□□ -0.05
SDH5Q08230 YNL208WYNL208W 600 nt14.69□□□□□ -0.06
SDH5Q08230 POA1YBR022W 534 nt14.63□□□□□ -0.07
SDH5Q08230 TIR1YER011W 765 nt14.51□□□□□ -0.09
SDH5Q08230 SPT5YML010W 3192 nt14.5□□□□□ -0.09
SDH5Q08230 SAH1YER043C 1350 nt14.49□□□□□ -0.09
SDH5Q08230 YHR049C-AYHR049C-A 297 nt14.49□□□□□ -0.09
SDH5Q08230 OPI9YLR338W 858 nt14.48□□□□□ -0.09
SDH5Q08230 BSC6YOL137W 1494 nt14.47□□□□□ -0.09
SDH5Q08230 SHU1YHL006C 453 nt14.47□□□□□ -0.09
SDH5Q08230 SSA1YAL005C 1929 nt14.19□□□□□ -0.14
SDH5Q08230 SSA4YER103W 1929 nt14.18□□□□□ -0.14
SDH5Q08230 PUN1YLR414C 792 nt14.15□□□□□ -0.14
SDH5Q08230 YAL037C-BYAL037C-B 975 nt14.13□□□□□ -0.15
SDH5Q08230 YJR018WYJR018W 363 nt14.12□□□□□ -0.15
SDH5Q08230 NPL3YDR432W 1245 nt14.04□□□□□ -0.16
SDH5Q08230 BUD23YCR047C 828 nt14.03□□□□□ -0.16
SDH5Q08230 RPP2BYDR382W 333 nt14.03□□□□□ -0.16
SDH5Q08230 YGR021WYGR021W 873 nt14.03□□□□□ -0.16
SDH5Q08230 YOR139CYOR139C 393 nt14.03□□□□□ -0.16
SDH5Q08230 PTC2YER089C 1395 nt13.9□□□□□ -0.18
SDH5Q08230 WWM1YFL010C 636 nt13.86□□□□□ -0.19
SDH5Q08230 HOM6YJR139C 1080 nt13.86□□□□□ -0.19
SDH5Q08230 SRB2YHR041C 633 nt13.84□□□□□ -0.19
SDH5Q08230 YOL037CYOL037C 354 nt13.82□□□□□ -0.2
SDH5Q08230 NAB2YGL122C 1578 nt13.79□□□□□ -0.2
SDH5Q08230 MNP1YGL068W 585 nt13.79□□□□□ -0.2
SDH5Q08230 BDF1YLR399C 2061 nt13.78□□□□□ -0.2
SDH5Q08230 YJR120WYJR120W 351 nt13.76□□□□□ -0.21
SDH5Q08230 YFL021C-AYFL021C-A 855 nt13.74□□□□□ -0.21
SDH5Q08230 BDH2YAL061W 1254 nt13.7□□□□□ -0.22
SDH5Q08230 RKM5YLR137W 1104 nt13.68□□□□□ -0.22
SDH5Q08230 MEP2YNL142W 1500 nt13.66□□□□□ -0.22
SDH5Q08230 INM2YDR287W 879 nt13.64□□□□□ -0.23
SDH5Q08230 FIS1YIL065C 468 nt13.63□□□□□ -0.23
SDH5Q08230 LSM3YLR438C-A 270 nt13.6□□□□□ -0.23
SDH5Q08230 Q0182Q0182 405 nt13.56□□□□□ -0.24
SDH5Q08230 TAT1YBR069C 1860 nt13.56□□□□□ -0.24
SDH5Q08230 DAL1YIR027C 1383 nt13.54□□□□□ -0.24
SDH5Q08230 FPR4YLR449W 1179 nt13.53□□□□□ -0.24
SDH5Q08230 YBL100CYBL100C 315 nt13.51□□□□□ -0.25
SDH5Q08230 tM(CAU)CtM(CAU)C 72 nt13.5□□□□□ -0.25
SDH5Q08230 IMT4tM(CAU)E 72 nt13.5□□□□□ -0.25
SDH5Q08230 IMT3tM(CAU)J3 72 nt13.5□□□□□ -0.25
SDH5Q08230 IMT1tM(CAU)O1 72 nt13.5□□□□□ -0.25
SDH5Q08230 IMT2tM(CAU)P 72 nt13.5□□□□□ -0.25
SDH5Q08230 DCW1YKL046C 1350 nt13.46□□□□□ -0.25
SDH5Q08230 TRM9YML014W 840 nt13.44□□□□□ -0.26
SDH5Q08230 YPS1YLR120C 1710 nt13.4□□□□□ -0.26
SDH5Q08230 PHO4YFR034C 939 nt13.39□□□□□ -0.27
SDH5Q08230 YLR281CYLR281C 468 nt13.38□□□□□ -0.27
SDH5Q08230 PUS2YGL063W 1113 nt13.37□□□□□ -0.27
SDH5Q08230 FUN26YAL022C 1554 nt13.33□□□□□ -0.28
SDH5Q08230 WHI5YOR083W 888 nt13.31□□□□□ -0.28
SDH5Q08230 YBR220CYBR220C 1683 nt13.26□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms