Protein–RNA interactions for Protein: Q04431

KRE28, Spindle pole body component KRE28, yeastyeast

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KRE28Q04431 NSR1YGR159C 1245 nt19.05■□□□□ 0.64
KRE28Q04431 YML009W-BYML009W-B 477 nt18.86■□□□□ 0.61
KRE28Q04431 NOP1YDL014W 984 nt18.36■□□□□ 0.53
KRE28Q04431 MDJ1YFL016C 1536 nt16.99■□□□□ 0.31
KRE28Q04431 YKL036CYKL036C 393 nt16.69■□□□□ 0.26
KRE28Q04431 SRX1YKL086W 384 nt16.02■□□□□ 0.16
KRE28Q04431 Q0297Q0297 156 nt15.99■□□□□ 0.15
KRE28Q04431 YJL027CYJL027C 417 nt15.74■□□□□ 0.11
KRE28Q04431 SSA3YBL075C 1950 nt15.65■□□□□ 0.1
KRE28Q04431 YCR051WYCR051W 669 nt15.11■□□□□ 0.01
KRE28Q04431 SCS3YGL126W 1143 nt15.03■□□□□ -0
KRE28Q04431 DBP2YNL112W 1641 nt14.99□□□□□ -0.01
KRE28Q04431 YBR190WYBR190W 312 nt14.65□□□□□ -0.06
KRE28Q04431 TRN1tP(UGG)A 72 nt14.59□□□□□ -0.07
KRE28Q04431 SUF9tP(UGG)F 72 nt14.59□□□□□ -0.07
KRE28Q04431 SUF8tP(UGG)H 72 nt14.59□□□□□ -0.07
KRE28Q04431 tP(UGG)LtP(UGG)L 72 nt14.59□□□□□ -0.07
KRE28Q04431 SUF7tP(UGG)M 72 nt14.59□□□□□ -0.07
KRE28Q04431 tP(UGG)N1tP(UGG)N1 72 nt14.59□□□□□ -0.07
KRE28Q04431 tP(UGG)N2tP(UGG)N2 72 nt14.59□□□□□ -0.07
KRE28Q04431 tP(UGG)O1tP(UGG)O1 72 nt14.59□□□□□ -0.07
KRE28Q04431 SUF11tP(UGG)O2 72 nt14.59□□□□□ -0.07
KRE28Q04431 YOL085CYOL085C 342 nt14.46□□□□□ -0.09
KRE28Q04431 CCC1YLR220W 969 nt14.37□□□□□ -0.11
KRE28Q04431 RPP1BYDL130W 321 nt14.33□□□□□ -0.12
KRE28Q04431 RTC3YHR087W 336 nt14.24□□□□□ -0.13
KRE28Q04431 PKP1YIL042C 1185 nt14.17□□□□□ -0.14
KRE28Q04431 RVS167YDR388W 1449 nt14.09□□□□□ -0.15
KRE28Q04431 SCJ1YMR214W 1134 nt13.89□□□□□ -0.19
KRE28Q04431 tP(UGG)O3tP(UGG)O3 72 nt13.72□□□□□ -0.21
KRE28Q04431 PUT4YOR348C 1884 nt13.69□□□□□ -0.22
KRE28Q04431 PET122YER153C 765 nt13.66□□□□□ -0.22
KRE28Q04431 SHR5YOL110W 714 nt13.55□□□□□ -0.24
KRE28Q04431 SCR1SCR1 522 nt13.51□□□□□ -0.25
KRE28Q04431 SSA4YER103W 1929 nt13.47□□□□□ -0.25
KRE28Q04431 SPT5YML010W 3192 nt13.45□□□□□ -0.26
KRE28Q04431 ATS1YAL020C 1002 nt13.41□□□□□ -0.26
KRE28Q04431 YDJ1YNL064C 1230 nt13.33□□□□□ -0.28
KRE28Q04431 RRN5YLR141W 1092 nt13.26□□□□□ -0.29
KRE28Q04431 URN1YPR152C 1398 nt13.26□□□□□ -0.29
KRE28Q04431 OPI9YLR338W 858 nt13.16□□□□□ -0.3
KRE28Q04431 PAC11YDR488C 1602 nt13.13□□□□□ -0.31
KRE28Q04431 BDF1YLR399C 2061 nt13.13□□□□□ -0.31
KRE28Q04431 DEP1YAL013W 1218 nt13.13□□□□□ -0.31
KRE28Q04431 POA1YBR022W 534 nt13.11□□□□□ -0.31
KRE28Q04431 ARE1YCR048W 1833 nt13.1□□□□□ -0.31
KRE28Q04431 RPN10YHR200W 807 nt13.08□□□□□ -0.32
KRE28Q04431 BSC6YOL137W 1494 nt13.07□□□□□ -0.32
KRE28Q04431 SAH1YER043C 1350 nt13.07□□□□□ -0.32
KRE28Q04431 YER088W-BYER088W-B 147 nt13□□□□□ -0.33
KRE28Q04431 YNL208WYNL208W 600 nt13□□□□□ -0.33
KRE28Q04431 GAR1YHR089C 618 nt12.98□□□□□ -0.33
KRE28Q04431 NVJ2YPR091C 2313 nt12.96□□□□□ -0.34
KRE28Q04431 YHR049C-AYHR049C-A 297 nt12.92□□□□□ -0.34
KRE28Q04431 TAT1YBR069C 1860 nt12.91□□□□□ -0.34
KRE28Q04431 RSB1YOR049C 1065 nt12.9□□□□□ -0.34
KRE28Q04431 PUN1YLR414C 792 nt12.79□□□□□ -0.36
KRE28Q04431 YJR018WYJR018W 363 nt12.66□□□□□ -0.38
KRE28Q04431 PTC2YER089C 1395 nt12.62□□□□□ -0.39
KRE28Q04431 TIR1YER011W 765 nt12.59□□□□□ -0.39
KRE28Q04431 BUD23YCR047C 828 nt12.58□□□□□ -0.4
KRE28Q04431 NAB2YGL122C 1578 nt12.52□□□□□ -0.4
KRE28Q04431 FPS1YLL043W 2010 nt12.49□□□□□ -0.41
KRE28Q04431 PST2YDR032C 597 nt12.48□□□□□ -0.41
KRE28Q04431 SSA1YAL005C 1929 nt12.45□□□□□ -0.42
KRE28Q04431 MEP2YNL142W 1500 nt12.4□□□□□ -0.42
KRE28Q04431 YJR120WYJR120W 351 nt12.38□□□□□ -0.43
KRE28Q04431 RPP2BYDR382W 333 nt12.37□□□□□ -0.43
KRE28Q04431 DAL1YIR027C 1383 nt12.3□□□□□ -0.44
KRE28Q04431 INM2YDR287W 879 nt12.29□□□□□ -0.44
KRE28Q04431 FIS1YIL065C 468 nt12.28□□□□□ -0.44
KRE28Q04431 DCW1YKL046C 1350 nt12.19□□□□□ -0.46
KRE28Q04431 FPR4YLR449W 1179 nt12.19□□□□□ -0.46
KRE28Q04431 YBR220CYBR220C 1683 nt12.18□□□□□ -0.46
KRE28Q04431 PHO4YFR034C 939 nt12.17□□□□□ -0.46
KRE28Q04431 SRB2YHR041C 633 nt12.15□□□□□ -0.46
KRE28Q04431 BDH2YAL061W 1254 nt12.08□□□□□ -0.48
KRE28Q04431 YBL100CYBL100C 315 nt12.08□□□□□ -0.48
KRE28Q04431 PCH2YBR186W 1695 nt12.03□□□□□ -0.48
KRE28Q04431 UME6YDR207C 2511 nt12.03□□□□□ -0.48
KRE28Q04431 GUT2YIL155C 1950 nt12.03□□□□□ -0.48
KRE28Q04431 YPS1YLR120C 1710 nt12.03□□□□□ -0.48
KRE28Q04431 SHU1YHL006C 453 nt11.97□□□□□ -0.49
KRE28Q04431 EMI2YDR516C 1503 nt11.96□□□□□ -0.49
KRE28Q04431 WWM1YFL010C 636 nt11.96□□□□□ -0.49
KRE28Q04431 LSM3YLR438C-A 270 nt11.94□□□□□ -0.5
KRE28Q04431 YDR095CYDR095C 411 nt11.93□□□□□ -0.5
KRE28Q04431 FUN26YAL022C 1554 nt11.92□□□□□ -0.5
KRE28Q04431 YGR021WYGR021W 873 nt11.91□□□□□ -0.5
KRE28Q04431 YMR090WYMR090W 684 nt11.91□□□□□ -0.5
KRE28Q04431 TRM9YML014W 840 nt11.89□□□□□ -0.51
KRE28Q04431 SDH1YKL148C 1923 nt11.88□□□□□ -0.51
KRE28Q04431 YHR165W-AYHR165W-A 312 nt11.87□□□□□ -0.51
KRE28Q04431 SEC11YIR022W 504 nt11.87□□□□□ -0.51
KRE28Q04431 PIB2YGL023C 1908 nt11.87□□□□□ -0.51
KRE28Q04431 YFL021C-AYFL021C-A 855 nt11.84□□□□□ -0.51
KRE28Q04431 YKL097CYKL097C 411 nt11.84□□□□□ -0.51
KRE28Q04431 HOM6YJR139C 1080 nt11.82□□□□□ -0.52
KRE28Q04431 YAL037C-BYAL037C-B 975 nt11.8□□□□□ -0.52
KRE28Q04431 ALF1YNL148C 765 nt11.8□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms