RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W CHD1P32657 1468 aa7.93□□□□□ -1.14
NMD5YJR132W LTV1P34078 463 aa7.93□□□□□ -1.14
NMD5YJR132W ALD4P46367 519 aaKnown RBP7.93□□□□□ -1.14
NMD5YJR132W PRP43P53131 767 aaKnown RBP7.93□□□□□ -1.14
NMD5YJR132W ALD3P54114 506 aa7.93□□□□□ -1.14
NMD5YJR132W CTF4Q01454 927 aa7.93□□□□□ -1.14
NMD5YJR132W CBF5P33322 483 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
NMD5YJR132W TAN1P53072 289 aaPredicted RBP7.92□□□□□ -1.14
NMD5YJR132W TMA64Q04600 565 aaKnown RBP7.92□□□□□ -1.14
NMD5YJR132W TPM2P40414 161 aa7.92□□□□□ -1.14
NMD5YJR132W CDC45Q08032 650 aa7.92□□□□□ -1.14
NMD5YJR132W ERP4Q12450 207 aa7.92□□□□□ -1.14
NMD5YJR132W BNI4P53858 892 aa7.92□□□□□ -1.14
NMD5YJR132W MAM3Q12296 706 aa7.92□□□□□ -1.14
NMD5YJR132W SPB4P25808 606 aaPredicted RBP7.91□□□□□ -1.14
NMD5YJR132W RPL5P26321 297 aaKnown RBP7.91□□□□□ -1.14
NMD5YJR132W HXT5P38695 592 aa7.91□□□□□ -1.14
NMD5YJR132W IES2P40154 320 aa7.91□□□□□ -1.14
NMD5YJR132W TY4B-PA0A0B7P3V8 1104 aa7.91□□□□□ -1.14
NMD5YJR132W MFT1P33441 392 aaKnown RBP7.91□□□□□ -1.14
NMD5YJR132W MUM2P38236 366 aa7.91□□□□□ -1.14
NMD5YJR132W SSF2Q12153 453 aaPredicted RBP7.91□□□□□ -1.14
NMD5YJR132W TY4A-HQ6Q5P6 413 aa7.91□□□□□ -1.14
NMD5YJR132W UBP1P25037 809 aa7.9□□□□□ -1.14
NMD5YJR132W MRF1P30775 413 aaPredicted RBP7.9□□□□□ -1.14
NMD5YJR132W BNI5P53890 448 aaKnown RBP7.9□□□□□ -1.14
NMD5YJR132W YNL058CP53947 316 aa7.9□□□□□ -1.14
NMD5YJR132W RSC2Q06488 889 aa7.9□□□□□ -1.14
NMD5YJR132W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
NMD5YJR132W VTC3Q02725 835 aa7.89□□□□□ -1.15
NMD5YJR132W GGA1Q06336 557 aa7.89□□□□□ -1.15
NMD5YJR132W BFA1P47113 574 aa7.89□□□□□ -1.15
NMD5YJR132W CLC1P17891 233 aa7.89□□□□□ -1.15
NMD5YJR132W RRN6P32786 894 aa7.89□□□□□ -1.15
NMD5YJR132W STE5P32917 917 aa7.89□□□□□ -1.15
NMD5YJR132W MAL31P38156 614 aa7.89□□□□□ -1.15
NMD5YJR132W BYE1P36106 594 aa7.88□□□□□ -1.15
NMD5YJR132W MGA2P40578 1113 aa7.88□□□□□ -1.15
NMD5YJR132W IES1P43579 692 aa7.88□□□□□ -1.15
NMD5YJR132W SGT2Q12118 346 aaKnown RBP7.88□□□□□ -1.15
NMD5YJR132W CMP2P14747 604 aa7.87□□□□□ -1.15
NMD5YJR132W RPC82P32349 654 aa7.87□□□□□ -1.15
NMD5YJR132W TPS3P38426 1054 aaKnown RBP7.87□□□□□ -1.15
NMD5YJR132W PUS1Q12211 544 aaKnown RBP7.87□□□□□ -1.15
NMD5YJR132W CEX1Q12453 761 aa7.87□□□□□ -1.15
NMD5YJR132W COG4Q06096 861 aa7.87□□□□□ -1.15
NMD5YJR132W MEP1P40260 492 aa7.87□□□□□ -1.15
NMD5YJR132W NFI1Q12216 726 aa7.87□□□□□ -1.15
NMD5YJR132W DNM1P54861 757 aa7.86□□□□□ -1.15
NMD5YJR132W NOP58Q12499 511 aaKnown RBP7.86□□□□□ -1.15
NMD5YJR132W RPL17AP05740 184 aaKnown RBP7.86□□□□□ -1.15
NMD5YJR132W CLN1P20437 546 aa7.86□□□□□ -1.15
NMD5YJR132W NPL4P33755 580 aa7.86□□□□□ -1.15
NMD5YJR132W YGL081WP53156 320 aa7.86□□□□□ -1.15
NMD5YJR132W OPY1P38271 328 aa7.85□□□□□ -1.15
NMD5YJR132W PPX1P38698 397 aa7.85□□□□□ -1.15
NMD5YJR132W ESF2P53743 316 aaKnown RBP7.85□□□□□ -1.15
NMD5YJR132W YOL057WQ08225 711 aa7.85□□□□□ -1.15
NMD5YJR132W PPH3P32345 308 aa7.85□□□□□ -1.15
NMD5YJR132W PRP3Q03338 469 aaPredicted RBP7.85□□□□□ -1.15
NMD5YJR132W ENT2Q05785 613 aa7.85□□□□□ -1.15
NMD5YJR132W MSM1P22438 575 aa7.84□□□□□ -1.15
NMD5YJR132W RRP15Q06511 250 aaPredicted RBP7.84□□□□□ -1.15
NMD5YJR132W SEC6P32844 805 aa7.83□□□□□ -1.16
NMD5YJR132W YMR124WP39523 943 aaKnown RBP7.83□□□□□ -1.16
NMD5YJR132W ALD2P47771 506 aa7.83□□□□□ -1.16
NMD5YJR132W MDM1Q01846 1127 aa7.83□□□□□ -1.16
NMD5YJR132W MPH3P0CE00 602 aa7.82□□□□□ -1.16
NMD5YJR132W TSR4P25040 408 aa7.82□□□□□ -1.16
NMD5YJR132W TIM11P81449 96 aaPredicted RBP7.82□□□□□ -1.16
NMD5YJR132W SVL3Q03088 825 aaKnown RBP7.82□□□□□ -1.16
NMD5YJR132W AVO1Q08236 1176 aa7.82□□□□□ -1.16
NMD5YJR132W ELA1P53861 379 aaPredicted RBP7.82□□□□□ -1.16
NMD5YJR132W APC5Q08683 685 aa7.82□□□□□ -1.16
NMD5YJR132W VHR2P40041 505 aa7.81□□□□□ -1.16
NMD5YJR132W GPI8P49018 411 aa7.81□□□□□ -1.16
NMD5YJR132W RRB1Q04225 511 aaKnown RBP7.81□□□□□ -1.16
NMD5YJR132W SUB2Q07478 446 aaKnown RBP7.81□□□□□ -1.16
NMD5YJR132W SAC3P46674 1301 aa7.81□□□□□ -1.16
NMD5YJR132W KIN1P13185 1064 aa7.81□□□□□ -1.16
NMD5YJR132W RIA1P53893 1110 aa7.81□□□□□ -1.16
NMD5YJR132W KEX1P09620 729 aa7.8□□□□□ -1.16
NMD5YJR132W YHR218WP38899 603 aa7.8□□□□□ -1.16
NMD5YJR132W CST6P40535 587 aa7.8□□□□□ -1.16
NMD5YJR132W RPL17BP46990 184 aaKnown RBP7.79□□□□□ -1.16
NMD5YJR132W SRP1Q02821 542 aaKnown RBP7.79□□□□□ -1.16
NMD5YJR132W GYP7P48365 746 aa7.79□□□□□ -1.16
NMD5YJR132W PHM6Q05637 104 aa7.79□□□□□ -1.16
NMD5YJR132W CYB2P00175 591 aa7.78□□□□□ -1.16
NMD5YJR132W CDC31P06704 161 aaKnown RBP7.78□□□□□ -1.16
NMD5YJR132W BRF1P29056 596 aa7.78□□□□□ -1.16
NMD5YJR132W PEX5P35056 612 aa7.78□□□□□ -1.16
NMD5YJR132W RUD3Q12234 484 aaKnown RBP7.78□□□□□ -1.16
NMD5YJR132W ESL2P36168 1195 aa7.78□□□□□ -1.16
NMD5YJR132W CTR9P89105 1077 aa7.78□□□□□ -1.16
NMD5YJR132W RRP9Q06506 573 aaKnown RBP7.78□□□□□ -1.16
NMD5YJR132W YVC1Q12324 675 aa7.78□□□□□ -1.16
NMD5YJR132W NKP1Q12493 238 aa7.78□□□□□ -1.16
NMD5YJR132W YOR389WQ08912 624 aa7.78□□□□□ -1.16
NMD5YJR132W SWI3P32591 825 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms