Protein–RNA interactions for Protein: Q6Q5P6

TY4A-H, Transposon Ty4-H Gag polyprotein, yeastyeast

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-HQ6Q5P6 YML009W-BYML009W-B 477 nt19.56■□□□□ 0.72
TY4A-HQ6Q5P6 NSR1YGR159C 1245 nt19.43■□□□□ 0.7
TY4A-HQ6Q5P6 NOP1YDL014W 984 nt19.01■□□□□ 0.63
TY4A-HQ6Q5P6 MDJ1YFL016C 1536 nt17.88■□□□□ 0.45
TY4A-HQ6Q5P6 YKL036CYKL036C 393 nt17.65■□□□□ 0.42
TY4A-HQ6Q5P6 Q0297Q0297 156 nt16.76■□□□□ 0.27
TY4A-HQ6Q5P6 SRX1YKL086W 384 nt16.68■□□□□ 0.26
TY4A-HQ6Q5P6 YJL027CYJL027C 417 nt16.46■□□□□ 0.23
TY4A-HQ6Q5P6 SCS3YGL126W 1143 nt16.14■□□□□ 0.17
TY4A-HQ6Q5P6 SSA3YBL075C 1950 nt15.89■□□□□ 0.13
TY4A-HQ6Q5P6 YCR051WYCR051W 669 nt15.76■□□□□ 0.11
TY4A-HQ6Q5P6 YBR190WYBR190W 312 nt15.53■□□□□ 0.08
TY4A-HQ6Q5P6 DBP2YNL112W 1641 nt15.48■□□□□ 0.07
TY4A-HQ6Q5P6 YOL085CYOL085C 342 nt15.33■□□□□ 0.04
TY4A-HQ6Q5P6 RTC3YHR087W 336 nt15.11■□□□□ 0.01
TY4A-HQ6Q5P6 TRN1tP(UGG)A 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 SUF9tP(UGG)F 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 SUF8tP(UGG)H 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 tP(UGG)LtP(UGG)L 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 SUF7tP(UGG)M 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 tP(UGG)N1tP(UGG)N1 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 tP(UGG)N2tP(UGG)N2 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 tP(UGG)O1tP(UGG)O1 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 SUF11tP(UGG)O2 72 nt15.09■□□□□ 0.01
TY4A-HQ6Q5P6 PKP1YIL042C 1185 nt15.05■□□□□ -0
TY4A-HQ6Q5P6 RPP1BYDL130W 321 nt15.02■□□□□ -0
TY4A-HQ6Q5P6 CCC1YLR220W 969 nt14.83□□□□□ -0.04
TY4A-HQ6Q5P6 PUT4YOR348C 1884 nt14.74□□□□□ -0.05
TY4A-HQ6Q5P6 ATS1YAL020C 1002 nt14.44□□□□□ -0.1
TY4A-HQ6Q5P6 RVS167YDR388W 1449 nt14.43□□□□□ -0.1
TY4A-HQ6Q5P6 PET122YER153C 765 nt14.36□□□□□ -0.11
TY4A-HQ6Q5P6 SCJ1YMR214W 1134 nt14.36□□□□□ -0.11
TY4A-HQ6Q5P6 tP(UGG)O3tP(UGG)O3 72 nt14.26□□□□□ -0.13
TY4A-HQ6Q5P6 ARE1YCR048W 1833 nt14.2□□□□□ -0.14
TY4A-HQ6Q5P6 POA1YBR022W 534 nt14.19□□□□□ -0.14
TY4A-HQ6Q5P6 SCR1SCR1 522 nt14.12□□□□□ -0.15
TY4A-HQ6Q5P6 BSC6YOL137W 1494 nt14.06□□□□□ -0.16
TY4A-HQ6Q5P6 SPT5YML010W 3192 nt14.06□□□□□ -0.16
TY4A-HQ6Q5P6 YHR049C-AYHR049C-A 297 nt14.02□□□□□ -0.17
TY4A-HQ6Q5P6 SSA4YER103W 1929 nt13.99□□□□□ -0.17
TY4A-HQ6Q5P6 RRN5YLR141W 1092 nt13.93□□□□□ -0.18
TY4A-HQ6Q5P6 SAH1YER043C 1350 nt13.92□□□□□ -0.18
TY4A-HQ6Q5P6 Q0182Q0182 405 nt13.87□□□□□ -0.19
TY4A-HQ6Q5P6 SHR5YOL110W 714 nt13.86□□□□□ -0.19
TY4A-HQ6Q5P6 URN1YPR152C 1398 nt13.83□□□□□ -0.19
TY4A-HQ6Q5P6 OPI9YLR338W 858 nt13.82□□□□□ -0.2
TY4A-HQ6Q5P6 YDJ1YNL064C 1230 nt13.81□□□□□ -0.2
TY4A-HQ6Q5P6 YER088W-BYER088W-B 147 nt13.68□□□□□ -0.22
TY4A-HQ6Q5P6 BUD23YCR047C 828 nt13.62□□□□□ -0.23
TY4A-HQ6Q5P6 RSB1YOR049C 1065 nt13.6□□□□□ -0.23
TY4A-HQ6Q5P6 BDF1YLR399C 2061 nt13.55□□□□□ -0.24
TY4A-HQ6Q5P6 DEP1YAL013W 1218 nt13.53□□□□□ -0.24
TY4A-HQ6Q5P6 RPN10YHR200W 807 nt13.48□□□□□ -0.25
TY4A-HQ6Q5P6 GAR1YHR089C 618 nt13.44□□□□□ -0.26
TY4A-HQ6Q5P6 PUN1YLR414C 792 nt13.44□□□□□ -0.26
TY4A-HQ6Q5P6 PST2YDR032C 597 nt13.4□□□□□ -0.26
TY4A-HQ6Q5P6 PTC2YER089C 1395 nt13.38□□□□□ -0.27
TY4A-HQ6Q5P6 SSA1YAL005C 1929 nt13.36□□□□□ -0.27
TY4A-HQ6Q5P6 NAB2YGL122C 1578 nt13.36□□□□□ -0.27
TY4A-HQ6Q5P6 TAT1YBR069C 1860 nt13.36□□□□□ -0.27
TY4A-HQ6Q5P6 MEP2YNL142W 1500 nt13.3□□□□□ -0.28
TY4A-HQ6Q5P6 YNL208WYNL208W 600 nt13.3□□□□□ -0.28
TY4A-HQ6Q5P6 PAC11YDR488C 1602 nt13.22□□□□□ -0.29
TY4A-HQ6Q5P6 YJR018WYJR018W 363 nt13.15□□□□□ -0.3
TY4A-HQ6Q5P6 FIS1YIL065C 468 nt13.05□□□□□ -0.32
TY4A-HQ6Q5P6 DCW1YKL046C 1350 nt13.03□□□□□ -0.32
TY4A-HQ6Q5P6 TIR1YER011W 765 nt13.01□□□□□ -0.33
TY4A-HQ6Q5P6 DAL1YIR027C 1383 nt13□□□□□ -0.33
TY4A-HQ6Q5P6 YPS1YLR120C 1710 nt12.94□□□□□ -0.34
TY4A-HQ6Q5P6 YBR220CYBR220C 1683 nt12.93□□□□□ -0.34
TY4A-HQ6Q5P6 FPR4YLR449W 1179 nt12.92□□□□□ -0.34
TY4A-HQ6Q5P6 YMR090WYMR090W 684 nt12.91□□□□□ -0.34
TY4A-HQ6Q5P6 PHO4YFR034C 939 nt12.87□□□□□ -0.35
TY4A-HQ6Q5P6 EMI2YDR516C 1503 nt12.87□□□□□ -0.35
TY4A-HQ6Q5P6 MOT3YMR070W 1473 nt12.85□□□□□ -0.35
TY4A-HQ6Q5P6 YHR165W-AYHR165W-A 312 nt12.84□□□□□ -0.35
TY4A-HQ6Q5P6 NVJ2YPR091C 2313 nt12.84□□□□□ -0.35
TY4A-HQ6Q5P6 INM2YDR287W 879 nt12.83□□□□□ -0.36
TY4A-HQ6Q5P6 SHU1YHL006C 453 nt12.83□□□□□ -0.36
TY4A-HQ6Q5P6 YKL097CYKL097C 411 nt12.82□□□□□ -0.36
TY4A-HQ6Q5P6 FPS1YLL043W 2010 nt12.81□□□□□ -0.36
TY4A-HQ6Q5P6 SRB2YHR041C 633 nt12.77□□□□□ -0.37
TY4A-HQ6Q5P6 YJR120WYJR120W 351 nt12.76□□□□□ -0.37
TY4A-HQ6Q5P6 SDH1YKL148C 1923 nt12.72□□□□□ -0.37
TY4A-HQ6Q5P6 YDR095CYDR095C 411 nt12.72□□□□□ -0.37
TY4A-HQ6Q5P6 YDL221WYDL221W 552 nt12.7□□□□□ -0.38
TY4A-HQ6Q5P6 RPP2BYDR382W 333 nt12.69□□□□□ -0.38
TY4A-HQ6Q5P6 PCH2YBR186W 1695 nt12.68□□□□□ -0.38
TY4A-HQ6Q5P6 SEC11YIR022W 504 nt12.65□□□□□ -0.38
TY4A-HQ6Q5P6 GUT2YIL155C 1950 nt12.63□□□□□ -0.39
TY4A-HQ6Q5P6 YAL037C-BYAL037C-B 975 nt12.58□□□□□ -0.4
TY4A-HQ6Q5P6 YJL225CYJL225C 5277 nt12.58□□□□□ -0.4
TY4A-HQ6Q5P6 CAC2YML102W 1407 nt12.54□□□□□ -0.4
TY4A-HQ6Q5P6 YBL100CYBL100C 315 nt12.53□□□□□ -0.4
TY4A-HQ6Q5P6 SCC4YER147C 1875 nt12.51□□□□□ -0.41
TY4A-HQ6Q5P6 PTP1YDL230W 1008 nt12.49□□□□□ -0.41
TY4A-HQ6Q5P6 RPP2AYOL039W 321 nt12.49□□□□□ -0.41
TY4A-HQ6Q5P6 WWM1YFL010C 636 nt12.46□□□□□ -0.41
TY4A-HQ6Q5P6 HOM6YJR139C 1080 nt12.4□□□□□ -0.42
TY4A-HQ6Q5P6 YOR139CYOR139C 393 nt12.4□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms