Protein–RNA interactions for Protein: Q06336

GGA1, ADP-ribosylation factor-binding protein GGA1, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA1Q06336 NSR1YGR159C 1245 nt19.55■□□□□ 0.72
GGA1Q06336 YML009W-BYML009W-B 477 nt19.42■□□□□ 0.7
GGA1Q06336 NOP1YDL014W 984 nt18.67■□□□□ 0.58
GGA1Q06336 MDJ1YFL016C 1536 nt17.82■□□□□ 0.44
GGA1Q06336 YKL036CYKL036C 393 nt16.83■□□□□ 0.28
GGA1Q06336 YJL027CYJL027C 417 nt16.42■□□□□ 0.22
GGA1Q06336 SRX1YKL086W 384 nt16.26■□□□□ 0.19
GGA1Q06336 Q0297Q0297 156 nt16.14■□□□□ 0.17
GGA1Q06336 SSA3YBL075C 1950 nt15.62■□□□□ 0.09
GGA1Q06336 DBP2YNL112W 1641 nt15.5■□□□□ 0.07
GGA1Q06336 YCR051WYCR051W 669 nt15.48■□□□□ 0.07
GGA1Q06336 YBR190WYBR190W 312 nt15.25■□□□□ 0.03
GGA1Q06336 SCS3YGL126W 1143 nt15.09■□□□□ 0.01
GGA1Q06336 RTC3YHR087W 336 nt14.98□□□□□ -0.01
GGA1Q06336 TRN1tP(UGG)A 72 nt14.96□□□□□ -0.01
GGA1Q06336 SUF9tP(UGG)F 72 nt14.96□□□□□ -0.01
GGA1Q06336 SUF8tP(UGG)H 72 nt14.96□□□□□ -0.01
GGA1Q06336 tP(UGG)LtP(UGG)L 72 nt14.96□□□□□ -0.01
GGA1Q06336 SUF7tP(UGG)M 72 nt14.96□□□□□ -0.01
GGA1Q06336 tP(UGG)N1tP(UGG)N1 72 nt14.96□□□□□ -0.01
GGA1Q06336 tP(UGG)N2tP(UGG)N2 72 nt14.96□□□□□ -0.01
GGA1Q06336 tP(UGG)O1tP(UGG)O1 72 nt14.96□□□□□ -0.01
GGA1Q06336 SUF11tP(UGG)O2 72 nt14.96□□□□□ -0.01
GGA1Q06336 CCC1YLR220W 969 nt14.87□□□□□ -0.03
GGA1Q06336 RVS167YDR388W 1449 nt14.6□□□□□ -0.07
GGA1Q06336 YOL085CYOL085C 342 nt14.56□□□□□ -0.08
GGA1Q06336 RPP1BYDL130W 321 nt14.51□□□□□ -0.09
GGA1Q06336 PKP1YIL042C 1185 nt14.45□□□□□ -0.1
GGA1Q06336 SCJ1YMR214W 1134 nt14.39□□□□□ -0.11
GGA1Q06336 PUT4YOR348C 1884 nt14.13□□□□□ -0.15
GGA1Q06336 tP(UGG)O3tP(UGG)O3 72 nt14.02□□□□□ -0.17
GGA1Q06336 SHR5YOL110W 714 nt13.95□□□□□ -0.18
GGA1Q06336 PET122YER153C 765 nt13.94□□□□□ -0.18
GGA1Q06336 URN1YPR152C 1398 nt13.83□□□□□ -0.19
GGA1Q06336 ARE1YCR048W 1833 nt13.76□□□□□ -0.21
GGA1Q06336 DEP1YAL013W 1218 nt13.74□□□□□ -0.21
GGA1Q06336 SAH1YER043C 1350 nt13.71□□□□□ -0.21
GGA1Q06336 POA1YBR022W 534 nt13.71□□□□□ -0.21
GGA1Q06336 SCR1SCR1 522 nt13.7□□□□□ -0.22
GGA1Q06336 YHR049C-AYHR049C-A 297 nt13.67□□□□□ -0.22
GGA1Q06336 OPI9YLR338W 858 nt13.67□□□□□ -0.22
GGA1Q06336 RPN10YHR200W 807 nt13.57□□□□□ -0.24
GGA1Q06336 YDJ1YNL064C 1230 nt13.54□□□□□ -0.24
GGA1Q06336 BSC6YOL137W 1494 nt13.49□□□□□ -0.25
GGA1Q06336 RRN5YLR141W 1092 nt13.47□□□□□ -0.25
GGA1Q06336 YNL208WYNL208W 600 nt13.44□□□□□ -0.26
GGA1Q06336 PAC11YDR488C 1602 nt13.4□□□□□ -0.26
GGA1Q06336 GAR1YHR089C 618 nt13.37□□□□□ -0.27
GGA1Q06336 NVJ2YPR091C 2313 nt13.37□□□□□ -0.27
GGA1Q06336 BUD23YCR047C 828 nt13.35□□□□□ -0.27
GGA1Q06336 ATS1YAL020C 1002 nt13.35□□□□□ -0.27
GGA1Q06336 PUN1YLR414C 792 nt13.31□□□□□ -0.28
GGA1Q06336 FPS1YLL043W 2010 nt13.29□□□□□ -0.28
GGA1Q06336 PTC2YER089C 1395 nt13.21□□□□□ -0.29
GGA1Q06336 YER088W-BYER088W-B 147 nt13.19□□□□□ -0.3
GGA1Q06336 YJR018WYJR018W 363 nt13.16□□□□□ -0.3
GGA1Q06336 RSB1YOR049C 1065 nt13.14□□□□□ -0.31
GGA1Q06336 SSA1YAL005C 1929 nt13.09□□□□□ -0.31
GGA1Q06336 NAB2YGL122C 1578 nt13.07□□□□□ -0.32
GGA1Q06336 SSA4YER103W 1929 nt13.01□□□□□ -0.33
GGA1Q06336 SPT5YML010W 3192 nt12.97□□□□□ -0.33
GGA1Q06336 TIR1YER011W 765 nt12.91□□□□□ -0.34
GGA1Q06336 FPR4YLR449W 1179 nt12.88□□□□□ -0.35
GGA1Q06336 FIS1YIL065C 468 nt12.86□□□□□ -0.35
GGA1Q06336 DAL1YIR027C 1383 nt12.84□□□□□ -0.35
GGA1Q06336 RPP2BYDR382W 333 nt12.83□□□□□ -0.36
GGA1Q06336 YJR120WYJR120W 351 nt12.81□□□□□ -0.36
GGA1Q06336 PHO4YFR034C 939 nt12.74□□□□□ -0.37
GGA1Q06336 INM2YDR287W 879 nt12.72□□□□□ -0.37
GGA1Q06336 BDF1YLR399C 2061 nt12.71□□□□□ -0.37
GGA1Q06336 MEP2YNL142W 1500 nt12.67□□□□□ -0.38
GGA1Q06336 YPS1YLR120C 1710 nt12.59□□□□□ -0.39
GGA1Q06336 YBL100CYBL100C 315 nt12.57□□□□□ -0.4
GGA1Q06336 YHR165W-AYHR165W-A 312 nt12.55□□□□□ -0.4
GGA1Q06336 SRB2YHR041C 633 nt12.5□□□□□ -0.41
GGA1Q06336 TAT1YBR069C 1860 nt12.48□□□□□ -0.41
GGA1Q06336 DCW1YKL046C 1350 nt12.48□□□□□ -0.41
GGA1Q06336 YDR095CYDR095C 411 nt12.46□□□□□ -0.41
GGA1Q06336 BDH2YAL061W 1254 nt12.44□□□□□ -0.42
GGA1Q06336 PST2YDR032C 597 nt12.4□□□□□ -0.42
GGA1Q06336 FUN26YAL022C 1554 nt12.39□□□□□ -0.43
GGA1Q06336 ALF1YNL148C 765 nt12.37□□□□□ -0.43
GGA1Q06336 EMI2YDR516C 1503 nt12.32□□□□□ -0.44
GGA1Q06336 YMR090WYMR090W 684 nt12.31□□□□□ -0.44
GGA1Q06336 UME6YDR207C 2511 nt12.3□□□□□ -0.44
GGA1Q06336 TRM9YML014W 840 nt12.3□□□□□ -0.44
GGA1Q06336 WWM1YFL010C 636 nt12.27□□□□□ -0.45
GGA1Q06336 RPP2AYOL039W 321 nt12.24□□□□□ -0.45
GGA1Q06336 YDL221WYDL221W 552 nt12.19□□□□□ -0.46
GGA1Q06336 YBR220CYBR220C 1683 nt12.18□□□□□ -0.46
GGA1Q06336 PTP1YDL230W 1008 nt12.17□□□□□ -0.46
GGA1Q06336 LSM3YLR438C-A 270 nt12.17□□□□□ -0.46
GGA1Q06336 CAC2YML102W 1407 nt12.16□□□□□ -0.46
GGA1Q06336 CCT6YDR188W 1641 nt12.15□□□□□ -0.46
GGA1Q06336 SUF2tP(AGG)C 72 nt12.15□□□□□ -0.46
GGA1Q06336 SUF10tP(AGG)N 72 nt12.15□□□□□ -0.46
GGA1Q06336 YGR021WYGR021W 873 nt12.1□□□□□ -0.47
GGA1Q06336 SDH1YKL148C 1923 nt12.09□□□□□ -0.47
GGA1Q06336 YFL021C-AYFL021C-A 855 nt12.08□□□□□ -0.48
GGA1Q06336 SIS1YNL007C 1059 nt12.07□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms