RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W RQC2Q12532 1038 aaKnown RBP11.8□□□□□ -0.52
NMD5YJR132W BFR2Q06631 534 aaKnown RBP11.03□□□□□ -0.64
NMD5YJR132W TAF7Q05021 590 aa10.96□□□□□ -0.66
NMD5YJR132W TFA1P36100 482 aa10.58□□□□□ -0.72
NMD5YJR132W DRS1P32892 752 aaKnown RBP10.52□□□□□ -0.73
NMD5YJR132W URN1Q06525 465 aaKnown RBP10.39□□□□□ -0.75
NMD5YJR132W SIS2P36024 562 aa9.76□□□□□ -0.85
NMD5YJR132W IOC4Q04213 475 aa9.61□□□□□ -0.87
NMD5YJR132W NAP1P25293 417 aaKnown RBP9.6□□□□□ -0.87
NMD5YJR132W EBP2P36049 427 aaKnown RBP9.6□□□□□ -0.87
NMD5YJR132W YFR016CP43597 1233 aaKnown RBP9.6□□□□□ -0.87
NMD5YJR132W LEO1P38439 464 aa9.54□□□□□ -0.88
NMD5YJR132W YRB30P53107 440 aaPredicted RBP9.52□□□□□ -0.89
NMD5YJR132W CAB3P36076 571 aa9.49□□□□□ -0.89
NMD5YJR132W AVT3P36062 692 aa9.46□□□□□ -0.9
NMD5YJR132W DMA1P38823 416 aa9.44□□□□□ -0.9
NMD5YJR132W DIP2Q12220 943 aaPredicted RBP9.4□□□□□ -0.9
NMD5YJR132W KRI1P42846 591 aaKnown RBP9.38□□□□□ -0.91
NMD5YJR132W RPS0BP46654 252 aaKnown RBP9.33□□□□□ -0.92
NMD5YJR132W AIM44Q99299 758 aa9.26□□□□□ -0.93
NMD5YJR132W IFH1P39520 1085 aa9.23□□□□□ -0.93
NMD5YJR132W NOP2P40991 618 aaKnown RBP9.18□□□□□ -0.94
NMD5YJR132W ORC1P54784 914 aaPredicted RBP9.12□□□□□ -0.95
NMD5YJR132W SNU71P53207 620 aaKnown RBP9.12□□□□□ -0.95
NMD5YJR132W CWC22P53333 577 aaKnown RBP9.08□□□□□ -0.96
NMD5YJR132W TOP1P04786 769 aa9.05□□□□□ -0.96
NMD5YJR132W MNN4P36044 1178 aa9.05□□□□□ -0.96
NMD5YJR132W MDG1P53885 366 aa8.94□□□□□ -0.98
NMD5YJR132W PSH1Q12161 406 aa8.88□□□□□ -0.99
NMD5YJR132W RLP24Q07915 199 aaKnown RBP8.87□□□□□ -0.99
NMD5YJR132W ABP1P15891 592 aaKnown RBP8.86□□□□□ -0.99
NMD5YJR132W DEF1P35732 738 aaKnown RBP8.85□□□□□ -0.99
NMD5YJR132W YPR148CQ06523 435 aa8.8□□□□□ -1
NMD5YJR132W SWE1P32944 819 aa8.77□□□□□ -1.01
NMD5YJR132W DMA2P53924 522 aa8.76□□□□□ -1.01
NMD5YJR132W GIN4Q12263 1142 aa8.75□□□□□ -1.01
NMD5YJR132W ENV11P53246 860 aa8.74□□□□□ -1.01
NMD5YJR132W LEU3P08638 886 aa8.72□□□□□ -1.01
NMD5YJR132W BRL1P38770 471 aa8.7□□□□□ -1.02
NMD5YJR132W HIF1Q12373 385 aa8.69□□□□□ -1.02
NMD5YJR132W MTC1P47018 478 aaKnown RBP8.67□□□□□ -1.02
NMD5YJR132W TOA1P32773 286 aa8.67□□□□□ -1.02
NMD5YJR132W RPN1P38764 993 aaKnown RBP8.65□□□□□ -1.03
NMD5YJR132W ATG36P46983 293 aa8.65□□□□□ -1.03
NMD5YJR132W NUG1P40010 520 aaKnown RBP8.64□□□□□ -1.03
NMD5YJR132W SUB1P54000 292 aaKnown RBP8.62□□□□□ -1.03
NMD5YJR132W TIF4632P39936 914 aaKnown RBP8.6□□□□□ -1.03
NMD5YJR132W RLF2Q12495 606 aa8.6□□□□□ -1.03
NMD5YJR132W TPO2P53283 614 aa8.6□□□□□ -1.03
NMD5YJR132W RSE1Q04693 1361 aaKnown RBP8.59□□□□□ -1.03
NMD5YJR132W NHA1Q99271 985 aa8.56□□□□□ -1.04
NMD5YJR132W SPT2P06843 333 aaPredicted RBP8.56□□□□□ -1.04
NMD5YJR132W SSA1P10591 642 aaKnown RBP8.56□□□□□ -1.04
NMD5YJR132W SSA2P10592 639 aaKnown RBP8.56□□□□□ -1.04
NMD5YJR132W VPS72Q03388 795 aa8.55□□□□□ -1.04
NMD5YJR132W RPS0AP32905 252 aaKnown RBP8.54□□□□□ -1.04
NMD5YJR132W LAM6Q08001 693 aa8.52□□□□□ -1.05
NMD5YJR132W SPT7P35177 1332 aa8.51□□□□□ -1.05
NMD5YJR132W NSR1P27476 414 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
NMD5YJR132W ISW1P38144 1129 aa8.51□□□□□ -1.05
NMD5YJR132W TLG1Q03322 224 aa8.5□□□□□ -1.05
NMD5YJR132W HSP82P02829 709 aaKnown RBP8.5□□□□□ -1.05
NMD5YJR132W NOP53Q12080 455 aaKnown RBP8.5□□□□□ -1.05
NMD5YJR132W BRN1P38170 754 aa8.49□□□□□ -1.05
NMD5YJR132W PLP2Q12017 286 aa8.49□□□□□ -1.05
NMD5YJR132W ASF1P32447 279 aa8.49□□□□□ -1.05
NMD5YJR132W FPR3P38911 411 aaKnown RBP8.48□□□□□ -1.05
NMD5YJR132W SPT16P32558 1035 aaKnown RBP8.48□□□□□ -1.05
NMD5YJR132W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
NMD5YJR132W MPP10P47083 593 aaKnown RBP8.44□□□□□ -1.06
NMD5YJR132W TCB2P48231 1178 aa8.43□□□□□ -1.06
NMD5YJR132W ENP1P38333 483 aaKnown RBP8.43□□□□□ -1.06
NMD5YJR132W RTS3P53289 263 aa8.43□□□□□ -1.06
NMD5YJR132W OSW7P43611 510 aa8.41□□□□□ -1.06
NMD5YJR132W YML020WQ03722 664 aa8.41□□□□□ -1.06
NMD5YJR132W GRX3Q03835 250 aa8.41□□□□□ -1.06
NMD5YJR132W BUD21Q08492 214 aaPredicted RBP8.41□□□□□ -1.06
NMD5YJR132W DAL5P15365 543 aa8.39□□□□□ -1.07
NMD5YJR132W SSP1P38871 571 aa8.38□□□□□ -1.07
NMD5YJR132W QCR6P00127 147 aa8.38□□□□□ -1.07
NMD5YJR132W NOP8Q08287 484 aaPredicted RBP8.37□□□□□ -1.07
NMD5YJR132W RNA1P11745 407 aaKnown RBP8.36□□□□□ -1.07
NMD5YJR132W KIP3P53086 805 aaKnown RBP8.36□□□□□ -1.07
NMD5YJR132W FAR11P53917 953 aa8.36□□□□□ -1.07
NMD5YJR132W YJR008WP47085 338 aa8.36□□□□□ -1.07
NMD5YJR132W TAF13P11747 167 aa8.36□□□□□ -1.07
NMD5YJR132W SAS10Q12136 610 aaPredicted RBP8.35□□□□□ -1.07
NMD5YJR132W SPT21P35209 758 aa8.33□□□□□ -1.08
NMD5YJR132W FPR4Q06205 392 aaPredicted RBP8.32□□□□□ -1.08
NMD5YJR132W GEF1P37020 779 aa8.32□□□□□ -1.08
NMD5YJR132W YNL011CP53980 444 aa8.32□□□□□ -1.08
NMD5YJR132W YMR196WQ04336 1088 aa8.32□□□□□ -1.08
NMD5YJR132W PDR1P12383 1068 aa8.31□□□□□ -1.08
NMD5YJR132W SSF1P38789 453 aaPredicted RBP8.31□□□□□ -1.08
NMD5YJR132W ZDS1P50111 915 aaKnown RBP8.31□□□□□ -1.08
NMD5YJR132W FUN12P39730 1002 aaKnown RBP8.3□□□□□ -1.08
NMD5YJR132W YGR130CP53278 816 aa8.29□□□□□ -1.08
NMD5YJR132W AIM21P40563 679 aa8.28□□□□□ -1.08
NMD5YJR132W PIL1P53252 339 aaKnown RBP8.28□□□□□ -1.08
NMD5YJR132W YTA7P40340 1379 aa8.27□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms