Protein–RNA interactions for Protein: Q06488

RSC2, Chromatin structure-remodeling complex subunit RSC2, yeastyeast

Predictions only

Length 889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC2Q06488 YML009W-BYML009W-B 477 nt20.48■□□□□ 0.87
RSC2Q06488 NSR1YGR159C 1245 nt20.47■□□□□ 0.87
RSC2Q06488 NOP1YDL014W 984 nt19.81■□□□□ 0.76
RSC2Q06488 MDJ1YFL016C 1536 nt18.38■□□□□ 0.53
RSC2Q06488 YKL036CYKL036C 393 nt18.11■□□□□ 0.49
RSC2Q06488 SRX1YKL086W 384 nt17.3■□□□□ 0.36
RSC2Q06488 Q0297Q0297 156 nt17.26■□□□□ 0.35
RSC2Q06488 YJL027CYJL027C 417 nt16.96■□□□□ 0.31
RSC2Q06488 YCR051WYCR051W 669 nt16.43■□□□□ 0.22
RSC2Q06488 SCS3YGL126W 1143 nt16.37■□□□□ 0.21
RSC2Q06488 DBP2YNL112W 1641 nt16.16■□□□□ 0.18
RSC2Q06488 TRN1tP(UGG)A 72 nt15.74■□□□□ 0.11
RSC2Q06488 SUF9tP(UGG)F 72 nt15.74■□□□□ 0.11
RSC2Q06488 SUF8tP(UGG)H 72 nt15.74■□□□□ 0.11
RSC2Q06488 tP(UGG)LtP(UGG)L 72 nt15.74■□□□□ 0.11
RSC2Q06488 SUF7tP(UGG)M 72 nt15.74■□□□□ 0.11
RSC2Q06488 tP(UGG)N1tP(UGG)N1 72 nt15.74■□□□□ 0.11
RSC2Q06488 tP(UGG)N2tP(UGG)N2 72 nt15.74■□□□□ 0.11
RSC2Q06488 tP(UGG)O1tP(UGG)O1 72 nt15.74■□□□□ 0.11
RSC2Q06488 SUF11tP(UGG)O2 72 nt15.74■□□□□ 0.11
RSC2Q06488 YBR190WYBR190W 312 nt15.7■□□□□ 0.1
RSC2Q06488 YOL085CYOL085C 342 nt15.68■□□□□ 0.1
RSC2Q06488 CCC1YLR220W 969 nt15.63■□□□□ 0.09
RSC2Q06488 RPP1BYDL130W 321 nt15.5■□□□□ 0.07
RSC2Q06488 PKP1YIL042C 1185 nt15.49■□□□□ 0.07
RSC2Q06488 RTC3YHR087W 336 nt15.39■□□□□ 0.05
RSC2Q06488 RVS167YDR388W 1449 nt15.17■□□□□ 0.02
RSC2Q06488 SCJ1YMR214W 1134 nt15.05■□□□□ -0
RSC2Q06488 tP(UGG)O3tP(UGG)O3 72 nt14.85□□□□□ -0.03
RSC2Q06488 PET122YER153C 765 nt14.84□□□□□ -0.03
RSC2Q06488 SCR1SCR1 522 nt14.64□□□□□ -0.07
RSC2Q06488 SHR5YOL110W 714 nt14.6□□□□□ -0.07
RSC2Q06488 ATS1YAL020C 1002 nt14.59□□□□□ -0.07
RSC2Q06488 SSA3YBL075C 1950 nt14.42□□□□□ -0.1
RSC2Q06488 RRN5YLR141W 1092 nt14.39□□□□□ -0.11
RSC2Q06488 PUT4YOR348C 1884 nt14.38□□□□□ -0.11
RSC2Q06488 YDJ1YNL064C 1230 nt14.35□□□□□ -0.11
RSC2Q06488 URN1YPR152C 1398 nt14.32□□□□□ -0.12
RSC2Q06488 DEP1YAL013W 1218 nt14.28□□□□□ -0.12
RSC2Q06488 OPI9YLR338W 858 nt14.13□□□□□ -0.15
RSC2Q06488 SAH1YER043C 1350 nt14.1□□□□□ -0.15
RSC2Q06488 YER088W-BYER088W-B 147 nt14.1□□□□□ -0.15
RSC2Q06488 GAR1YHR089C 618 nt14.09□□□□□ -0.15
RSC2Q06488 ARE1YCR048W 1833 nt14.07□□□□□ -0.16
RSC2Q06488 RPN10YHR200W 807 nt14.07□□□□□ -0.16
RSC2Q06488 RSB1YOR049C 1065 nt14.06□□□□□ -0.16
RSC2Q06488 YNL208WYNL208W 600 nt14□□□□□ -0.17
RSC2Q06488 POA1YBR022W 534 nt13.96□□□□□ -0.17
RSC2Q06488 YHR049C-AYHR049C-A 297 nt13.92□□□□□ -0.18
RSC2Q06488 PUN1YLR414C 792 nt13.72□□□□□ -0.21
RSC2Q06488 BSC6YOL137W 1494 nt13.67□□□□□ -0.22
RSC2Q06488 YJR018WYJR018W 363 nt13.64□□□□□ -0.23
RSC2Q06488 TIR1YER011W 765 nt13.62□□□□□ -0.23
RSC2Q06488 BUD23YCR047C 828 nt13.61□□□□□ -0.23
RSC2Q06488 PTC2YER089C 1395 nt13.59□□□□□ -0.23
RSC2Q06488 Q0182Q0182 405 nt13.57□□□□□ -0.24
RSC2Q06488 PST2YDR032C 597 nt13.53□□□□□ -0.24
RSC2Q06488 SSA1YAL005C 1929 nt13.48□□□□□ -0.25
RSC2Q06488 NAB2YGL122C 1578 nt13.43□□□□□ -0.26
RSC2Q06488 YJR120WYJR120W 351 nt13.37□□□□□ -0.27
RSC2Q06488 RPP2BYDR382W 333 nt13.33□□□□□ -0.28
RSC2Q06488 MOT3YMR070W 1473 nt13.29□□□□□ -0.28
RSC2Q06488 FPR4YLR449W 1179 nt13.23□□□□□ -0.29
RSC2Q06488 DAL1YIR027C 1383 nt13.22□□□□□ -0.29
RSC2Q06488 SRB2YHR041C 633 nt13.22□□□□□ -0.29
RSC2Q06488 FIS1YIL065C 468 nt13.22□□□□□ -0.29
RSC2Q06488 INM2YDR287W 879 nt13.17□□□□□ -0.3
RSC2Q06488 PHO4YFR034C 939 nt13.11□□□□□ -0.31
RSC2Q06488 SPT5YML010W 3192 nt13.08□□□□□ -0.32
RSC2Q06488 SHU1YHL006C 453 nt13.04□□□□□ -0.32
RSC2Q06488 YBL100CYBL100C 315 nt13.03□□□□□ -0.32
RSC2Q06488 BDH2YAL061W 1254 nt13.01□□□□□ -0.33
RSC2Q06488 WWM1YFL010C 636 nt12.99□□□□□ -0.33
RSC2Q06488 FPS1YLL043W 2010 nt12.99□□□□□ -0.33
RSC2Q06488 YAL037C-BYAL037C-B 975 nt12.93□□□□□ -0.34
RSC2Q06488 YKL097CYKL097C 411 nt12.92□□□□□ -0.34
RSC2Q06488 YPS1YLR120C 1710 nt12.89□□□□□ -0.35
RSC2Q06488 FUN26YAL022C 1554 nt12.86□□□□□ -0.35
RSC2Q06488 YGR021WYGR021W 873 nt12.85□□□□□ -0.35
RSC2Q06488 MEP2YNL142W 1500 nt12.84□□□□□ -0.35
RSC2Q06488 TRM9YML014W 840 nt12.81□□□□□ -0.36
RSC2Q06488 YHR165W-AYHR165W-A 312 nt12.8□□□□□ -0.36
RSC2Q06488 LSM3YLR438C-A 270 nt12.8□□□□□ -0.36
RSC2Q06488 YDR095CYDR095C 411 nt12.79□□□□□ -0.36
RSC2Q06488 HOM6YJR139C 1080 nt12.78□□□□□ -0.36
RSC2Q06488 YFL021C-AYFL021C-A 855 nt12.77□□□□□ -0.37
RSC2Q06488 NVJ2YPR091C 2313 nt12.74□□□□□ -0.37
RSC2Q06488 ALF1YNL148C 765 nt12.74□□□□□ -0.37
RSC2Q06488 SSA4YER103W 1929 nt12.74□□□□□ -0.37
RSC2Q06488 MNP1YGL068W 585 nt12.72□□□□□ -0.37
RSC2Q06488 CCT6YDR188W 1641 nt12.66□□□□□ -0.38
RSC2Q06488 DCW1YKL046C 1350 nt12.65□□□□□ -0.38
RSC2Q06488 RKM5YLR137W 1104 nt12.6□□□□□ -0.39
RSC2Q06488 SUF2tP(AGG)C 72 nt12.59□□□□□ -0.39
RSC2Q06488 SUF10tP(AGG)N 72 nt12.59□□□□□ -0.39
RSC2Q06488 PAC11YDR488C 1602 nt12.56□□□□□ -0.4
RSC2Q06488 RPP2AYOL039W 321 nt12.56□□□□□ -0.4
RSC2Q06488 PTP1YDL230W 1008 nt12.51□□□□□ -0.41
RSC2Q06488 SIS1YNL007C 1059 nt12.51□□□□□ -0.41
RSC2Q06488 EMI2YDR516C 1503 nt12.49□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 11.2 ms