Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-PA0A0B7P3V8 NSR1YGR159C 1245 nt19.4■□□□□ 0.7
TY4B-PA0A0B7P3V8 YML009W-BYML009W-B 477 nt19.29■□□□□ 0.68
TY4B-PA0A0B7P3V8 NOP1YDL014W 984 nt18.67■□□□□ 0.58
TY4B-PA0A0B7P3V8 MDJ1YFL016C 1536 nt17.45■□□□□ 0.38
TY4B-PA0A0B7P3V8 YKL036CYKL036C 393 nt16.96■□□□□ 0.31
TY4B-PA0A0B7P3V8 SRX1YKL086W 384 nt16.28■□□□□ 0.2
TY4B-PA0A0B7P3V8 Q0297Q0297 156 nt16.23■□□□□ 0.19
TY4B-PA0A0B7P3V8 YJL027CYJL027C 417 nt16.11■□□□□ 0.17
TY4B-PA0A0B7P3V8 SSA3YBL075C 1950 nt15.64■□□□□ 0.09
TY4B-PA0A0B7P3V8 YCR051WYCR051W 669 nt15.44■□□□□ 0.06
TY4B-PA0A0B7P3V8 DBP2YNL112W 1641 nt15.32■□□□□ 0.04
TY4B-PA0A0B7P3V8 SCS3YGL126W 1143 nt15.29■□□□□ 0.04
TY4B-PA0A0B7P3V8 YBR190WYBR190W 312 nt14.97□□□□□ -0.01
TY4B-PA0A0B7P3V8 TRN1tP(UGG)A 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 SUF9tP(UGG)F 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 SUF8tP(UGG)H 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 tP(UGG)LtP(UGG)L 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 SUF7tP(UGG)M 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 tP(UGG)N1tP(UGG)N1 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 tP(UGG)N2tP(UGG)N2 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 tP(UGG)O1tP(UGG)O1 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 SUF11tP(UGG)O2 72 nt14.87□□□□□ -0.03
TY4B-PA0A0B7P3V8 CCC1YLR220W 969 nt14.73□□□□□ -0.05
TY4B-PA0A0B7P3V8 YOL085CYOL085C 342 nt14.68□□□□□ -0.06
TY4B-PA0A0B7P3V8 RTC3YHR087W 336 nt14.63□□□□□ -0.07
TY4B-PA0A0B7P3V8 RPP1BYDL130W 321 nt14.56□□□□□ -0.08
TY4B-PA0A0B7P3V8 PKP1YIL042C 1185 nt14.48□□□□□ -0.09
TY4B-PA0A0B7P3V8 RVS167YDR388W 1449 nt14.41□□□□□ -0.1
TY4B-PA0A0B7P3V8 SCJ1YMR214W 1134 nt14.22□□□□□ -0.13
TY4B-PA0A0B7P3V8 tP(UGG)O3tP(UGG)O3 72 nt13.98□□□□□ -0.17
TY4B-PA0A0B7P3V8 PET122YER153C 765 nt13.94□□□□□ -0.18
TY4B-PA0A0B7P3V8 Q0182Q0182 405 nt13.87□□□□□ -0.19
TY4B-PA0A0B7P3V8 SHR5YOL110W 714 nt13.82□□□□□ -0.2
TY4B-PA0A0B7P3V8 PUT4YOR348C 1884 nt13.77□□□□□ -0.21
TY4B-PA0A0B7P3V8 SCR1SCR1 522 nt13.75□□□□□ -0.21
TY4B-PA0A0B7P3V8 ATS1YAL020C 1002 nt13.72□□□□□ -0.21
TY4B-PA0A0B7P3V8 URN1YPR152C 1398 nt13.59□□□□□ -0.23
TY4B-PA0A0B7P3V8 YDJ1YNL064C 1230 nt13.55□□□□□ -0.24
TY4B-PA0A0B7P3V8 RRN5YLR141W 1092 nt13.51□□□□□ -0.25
TY4B-PA0A0B7P3V8 DEP1YAL013W 1218 nt13.5□□□□□ -0.25
TY4B-PA0A0B7P3V8 OPI9YLR338W 858 nt13.45□□□□□ -0.26
TY4B-PA0A0B7P3V8 ARE1YCR048W 1833 nt13.44□□□□□ -0.26
TY4B-PA0A0B7P3V8 PAC11YDR488C 1602 nt13.42□□□□□ -0.26
TY4B-PA0A0B7P3V8 SAH1YER043C 1350 nt13.42□□□□□ -0.26
TY4B-PA0A0B7P3V8 NVJ2YPR091C 2313 nt13.37□□□□□ -0.27
TY4B-PA0A0B7P3V8 RPN10YHR200W 807 nt13.36□□□□□ -0.27
TY4B-PA0A0B7P3V8 SSA1YAL005C 1929 nt13.36□□□□□ -0.27
TY4B-PA0A0B7P3V8 POA1YBR022W 534 nt13.33□□□□□ -0.28
TY4B-PA0A0B7P3V8 YHR049C-AYHR049C-A 297 nt13.28□□□□□ -0.28
TY4B-PA0A0B7P3V8 YNL208WYNL208W 600 nt13.28□□□□□ -0.28
TY4B-PA0A0B7P3V8 FPS1YLL043W 2010 nt13.27□□□□□ -0.28
TY4B-PA0A0B7P3V8 GAR1YHR089C 618 nt13.27□□□□□ -0.29
TY4B-PA0A0B7P3V8 YER088W-BYER088W-B 147 nt13.24□□□□□ -0.29
TY4B-PA0A0B7P3V8 RSB1YOR049C 1065 nt13.16□□□□□ -0.3
TY4B-PA0A0B7P3V8 BSC6YOL137W 1494 nt13.09□□□□□ -0.31
TY4B-PA0A0B7P3V8 PUN1YLR414C 792 nt13.06□□□□□ -0.32
TY4B-PA0A0B7P3V8 SSA4YER103W 1929 nt13.03□□□□□ -0.32
TY4B-PA0A0B7P3V8 BUD23YCR047C 828 nt12.97□□□□□ -0.33
TY4B-PA0A0B7P3V8 YJR018WYJR018W 363 nt12.95□□□□□ -0.34
TY4B-PA0A0B7P3V8 PTC2YER089C 1395 nt12.94□□□□□ -0.34
TY4B-PA0A0B7P3V8 TIR1YER011W 765 nt12.85□□□□□ -0.35
TY4B-PA0A0B7P3V8 MOT3YMR070W 1473 nt12.85□□□□□ -0.35
TY4B-PA0A0B7P3V8 NAB2YGL122C 1578 nt12.81□□□□□ -0.36
TY4B-PA0A0B7P3V8 BDF1YLR399C 2061 nt12.71□□□□□ -0.37
TY4B-PA0A0B7P3V8 PST2YDR032C 597 nt12.67□□□□□ -0.38
TY4B-PA0A0B7P3V8 YJR120WYJR120W 351 nt12.66□□□□□ -0.38
TY4B-PA0A0B7P3V8 SPT5YML010W 3192 nt12.65□□□□□ -0.38
TY4B-PA0A0B7P3V8 RPP2BYDR382W 333 nt12.64□□□□□ -0.39
TY4B-PA0A0B7P3V8 DAL1YIR027C 1383 nt12.6□□□□□ -0.39
TY4B-PA0A0B7P3V8 FIS1YIL065C 468 nt12.59□□□□□ -0.39
TY4B-PA0A0B7P3V8 FPR4YLR449W 1179 nt12.56□□□□□ -0.4
TY4B-PA0A0B7P3V8 INM2YDR287W 879 nt12.53□□□□□ -0.4
TY4B-PA0A0B7P3V8 TAT1YBR069C 1860 nt12.51□□□□□ -0.41
TY4B-PA0A0B7P3V8 PHO4YFR034C 939 nt12.47□□□□□ -0.41
TY4B-PA0A0B7P3V8 SRB2YHR041C 633 nt12.43□□□□□ -0.42
TY4B-PA0A0B7P3V8 YBL100CYBL100C 315 nt12.36□□□□□ -0.43
TY4B-PA0A0B7P3V8 BDH2YAL061W 1254 nt12.33□□□□□ -0.44
TY4B-PA0A0B7P3V8 MEP2YNL142W 1500 nt12.32□□□□□ -0.44
TY4B-PA0A0B7P3V8 YPS1YLR120C 1710 nt12.31□□□□□ -0.44
TY4B-PA0A0B7P3V8 UME6YDR207C 2511 nt12.28□□□□□ -0.44
TY4B-PA0A0B7P3V8 YKL097CYKL097C 411 nt12.28□□□□□ -0.44
TY4B-PA0A0B7P3V8 WWM1YFL010C 636 nt12.22□□□□□ -0.45
TY4B-PA0A0B7P3V8 YHR165W-AYHR165W-A 312 nt12.21□□□□□ -0.45
TY4B-PA0A0B7P3V8 FUN26YAL022C 1554 nt12.21□□□□□ -0.46
TY4B-PA0A0B7P3V8 YDR095CYDR095C 411 nt12.2□□□□□ -0.46
TY4B-PA0A0B7P3V8 SHU1YHL006C 453 nt12.17□□□□□ -0.46
TY4B-PA0A0B7P3V8 TRM9YML014W 840 nt12.15□□□□□ -0.46
TY4B-PA0A0B7P3V8 LSM3YLR438C-A 270 nt12.12□□□□□ -0.47
TY4B-PA0A0B7P3V8 ALF1YNL148C 765 nt12.11□□□□□ -0.47
TY4B-PA0A0B7P3V8 DCW1YKL046C 1350 nt12.1□□□□□ -0.47
TY4B-PA0A0B7P3V8 YGR021WYGR021W 873 nt12.1□□□□□ -0.47
TY4B-PA0A0B7P3V8 YAL037C-BYAL037C-B 975 nt12.06□□□□□ -0.48
TY4B-PA0A0B7P3V8 YFL021C-AYFL021C-A 855 nt12.05□□□□□ -0.48
TY4B-PA0A0B7P3V8 CCT6YDR188W 1641 nt12.03□□□□□ -0.48
TY4B-PA0A0B7P3V8 HOM6YJR139C 1080 nt12.02□□□□□ -0.49
TY4B-PA0A0B7P3V8 RPM1RPM1 483 nt11.98□□□□□ -0.49
TY4B-PA0A0B7P3V8 RPP2AYOL039W 321 nt11.98□□□□□ -0.49
TY4B-PA0A0B7P3V8 SUF2tP(AGG)C 72 nt11.97□□□□□ -0.49
TY4B-PA0A0B7P3V8 SUF10tP(AGG)N 72 nt11.97□□□□□ -0.49
TY4B-PA0A0B7P3V8 EMI2YDR516C 1503 nt11.96□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 656.4 ms