RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C NUP120P35729 1037 aa3.48□□□□□ -1.85
YIR040CYIR040C SET3P36124 751 aa3.48□□□□□ -1.85
YIR040CYIR040C ECM4P36156 370 aa3.48□□□□□ -1.85
YIR040CYIR040C YSW1P38280 609 aa3.48□□□□□ -1.85
YIR040CYIR040C GGA2P38817 585 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C CTM1P38818 585 aa3.48□□□□□ -1.85
YIR040CYIR040C CRP1P38845 465 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C RTS1P38903 757 aa3.48□□□□□ -1.85
YIR040CYIR040C FMP10P40098 244 aa3.48□□□□□ -1.85
YIR040CYIR040C PCL7P40186 285 aa3.48□□□□□ -1.85
YIR040CYIR040C NDE1P40215 560 aa3.48□□□□□ -1.85
YIR040CYIR040C TMA108P40462 946 aa3.48□□□□□ -1.85
YIR040CYIR040C URM1P40554 99 aaPredicted RBP3.48□□□□□ -1.85
YIR040CYIR040C GCD10P41814 478 aa3.48□□□□□ -1.85
YIR040CYIR040C ZIM17P42844 174 aa3.48□□□□□ -1.85
YIR040CYIR040C SNX4P47057 423 aa3.48□□□□□ -1.85
YIR040CYIR040C RAI1P53063 387 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C NCS6P53088 359 aa3.48□□□□□ -1.85
YIR040CYIR040C MNP1P53163 194 aaPredicted RBP3.48□□□□□ -1.85
YIR040CYIR040C ERP6P53198 216 aa3.48□□□□□ -1.85
YIR040CYIR040C PEX8P53248 589 aa3.48□□□□□ -1.85
YIR040CYIR040C RET3P53600 189 aa3.48□□□□□ -1.85
YIR040CYIR040C LCD1Q04377 747 aa3.48□□□□□ -1.85
YIR040CYIR040C SSL1Q04673 461 aaPredicted RBP3.48□□□□□ -1.85
YIR040CYIR040C MCP2Q06567 569 aa3.48□□□□□ -1.85
YIR040CYIR040C LOT6Q07923 191 aa3.48□□□□□ -1.85
YIR040CYIR040C PSR2Q07949 397 aa3.48□□□□□ -1.85
YIR040CYIR040C PGC1Q08959 321 aa3.48□□□□□ -1.85
YIR040CYIR040C CDC53Q12018 815 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C UPC2Q12151 913 aa3.48□□□□□ -1.85
YIR040CYIR040C TAF3Q12297 353 aa3.48□□□□□ -1.85
YIR040CYIR040C PIF1P07271 859 aa3.47□□□□□ -1.85
YIR040CYIR040C HEM1P09950 548 aaPredicted RBP3.47□□□□□ -1.85
YIR040CYIR040C VPS3P23643 1011 aa3.47□□□□□ -1.85
YIR040CYIR040C CLB1P24868 471 aa3.47□□□□□ -1.85
YIR040CYIR040C HSP104P31539 908 aaKnown RBP3.47□□□□□ -1.85
YIR040CYIR040C MEI5P32489 222 aa3.47□□□□□ -1.85
YIR040CYIR040C RPD3P32561 433 aa3.47□□□□□ -1.85
YIR040CYIR040C STE14P32584 239 aa3.47□□□□□ -1.85
YIR040CYIR040C VMA8P32610 256 aaKnown RBP3.47□□□□□ -1.85
YIR040CYIR040C MRP4P32902 394 aa3.47□□□□□ -1.85
YIR040CYIR040C SWH1P35845 1188 aa3.47□□□□□ -1.85
YIR040CYIR040C PET10P36139 283 aa3.47□□□□□ -1.85
YIR040CYIR040C NOP4P37838 685 aaKnown RBP3.47□□□□□ -1.85
YIR040CYIR040C POP7P38291 140 aa3.47□□□□□ -1.85
YIR040CYIR040C TCD1P38756 429 aa3.47□□□□□ -1.85
YIR040CYIR040C YHB1P39676 399 aaKnown RBP3.47□□□□□ -1.85
YIR040CYIR040C ESL1P40456 1118 aa3.47□□□□□ -1.85
YIR040CYIR040C AGX1P43567 385 aa3.47□□□□□ -1.85
YIR040CYIR040C PSP2P50109 593 aaKnown RBP3.47□□□□□ -1.85
YIR040CYIR040C PHO23P50947 330 aa3.47□□□□□ -1.85
YIR040CYIR040C RTA1P53047 317 aa3.47□□□□□ -1.85
YIR040CYIR040C YGR125WP53273 1036 aa3.47□□□□□ -1.85
YIR040CYIR040C NCS2P53923 493 aaPredicted RBP3.47□□□□□ -1.85
YIR040CYIR040C SEC5P89102 971 aa3.47□□□□□ -1.85
YIR040CYIR040C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
YIR040CYIR040C VPS20Q04272 221 aa3.47□□□□□ -1.85
YIR040CYIR040C YDR286CQ05530 114 aa3.47□□□□□ -1.85
YIR040CYIR040C PEX19Q07418 342 aa3.47□□□□□ -1.85
YIR040CYIR040C BDF2Q07442 638 aa3.47□□□□□ -1.85
YIR040CYIR040C APL4Q12028 832 aa3.47□□□□□ -1.85
YIR040CYIR040C OSH2Q12451 1283 aa3.47□□□□□ -1.85
YIR040CYIR040C NOT5Q12514 560 aaPredicted RBP3.47□□□□□ -1.85
YIR040CYIR040C IKI3Q06706 1349 aaKnown RBP3.46□□□□□ -1.85
YIR040CYIR040C HSP60P19882 572 aaKnown RBP3.46□□□□□ -1.86
YIR040CYIR040C REC107P21651 314 aa3.46□□□□□ -1.86
YIR040CYIR040C KRE6P32486 720 aa3.46□□□□□ -1.86
YIR040CYIR040C SSE1P32589 693 aaKnown RBP3.46□□□□□ -1.86
YIR040CYIR040C ECM32P32644 1121 aaKnown RBP3.46□□□□□ -1.86
YIR040CYIR040C REC104P33323 182 aa3.46□□□□□ -1.86
YIR040CYIR040C STE13P33894 931 aa3.46□□□□□ -1.86
YIR040CYIR040C BET3P36149 193 aa3.46□□□□□ -1.86
YIR040CYIR040C VPS45P38932 577 aa3.46□□□□□ -1.86
YIR040CYIR040C ECM1P39715 212 aa3.46□□□□□ -1.86
YIR040CYIR040C RSP5P39940 809 aaKnown RBP3.46□□□□□ -1.86
YIR040CYIR040C JEM1P40358 645 aa3.46□□□□□ -1.86
YIR040CYIR040C ROK1P45818 564 aaPredicted RBP3.46□□□□□ -1.86
YIR040CYIR040C SAE2P46946 345 aa3.46□□□□□ -1.86
YIR040CYIR040C EXG2P52911 562 aa3.46□□□□□ -1.86
YIR040CYIR040C MDR1P53258 950 aa3.46□□□□□ -1.86
YIR040CYIR040C ALF1P53904 254 aa3.46□□□□□ -1.86
YIR040CYIR040C HDA1P53973 706 aa3.46□□□□□ -1.86
YIR040CYIR040C VPS60Q03390 229 aa3.46□□□□□ -1.86
YIR040CYIR040C TAF8Q03750 510 aa3.46□□□□□ -1.86
YIR040CYIR040C SPN1Q06505 410 aaPredicted RBP3.46□□□□□ -1.86
YIR040CYIR040C MLH2Q07980 695 aa3.46□□□□□ -1.86
YIR040CYIR040C FLC1Q08967 793 aa3.46□□□□□ -1.86
YIR040CYIR040C TRM8Q12009 286 aa3.46□□□□□ -1.86
YIR040CYIR040C ICL2Q12031 575 aa3.46□□□□□ -1.86
YIR040CYIR040C NPC2Q12408 173 aa3.46□□□□□ -1.86
YIR040CYIR040C LAS17Q12446 633 aa3.46□□□□□ -1.86
YIR040CYIR040C PMA1P05030 918 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C FBP1P09201 348 aa3.45□□□□□ -1.86
YIR040CYIR040C PGI1P12709 554 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C VPS1P21576 704 aaKnown RBP3.45□□□□□ -1.86
YIR040CYIR040C RAD53P22216 821 aa3.45□□□□□ -1.86
YIR040CYIR040C HCM1P25364 564 aa3.45□□□□□ -1.86
YIR040CYIR040C DCG1P32460 244 aa3.45□□□□□ -1.86
YIR040CYIR040C HIR1P32479 840 aa3.45□□□□□ -1.86
YIR040CYIR040C RIB7P33312 244 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 103.5 ms