Protein–RNA interactions for Protein: P53258

MDR1, GTPase-activating protein GYP2, yeastyeast

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MDR1P53258 YML009W-BYML009W-B 477 nt22.74■■□□□ 1.23
MDR1P53258 NSR1YGR159C 1245 nt22.35■■□□□ 1.17
MDR1P53258 NOP1YDL014W 984 nt22.27■■□□□ 1.16
MDR1P53258 YKL036CYKL036C 393 nt20.75■□□□□ 0.91
MDR1P53258 MDJ1YFL016C 1536 nt19.55■□□□□ 0.72
MDR1P53258 Q0297Q0297 156 nt19.49■□□□□ 0.71
MDR1P53258 YJL027CYJL027C 417 nt19.43■□□□□ 0.7
MDR1P53258 SRX1YKL086W 384 nt19.39■□□□□ 0.69
MDR1P53258 SCS3YGL126W 1143 nt18.97■□□□□ 0.63
MDR1P53258 YCR051WYCR051W 669 nt18.46■□□□□ 0.55
MDR1P53258 YOL085CYOL085C 342 nt17.92■□□□□ 0.46
MDR1P53258 PKP1YIL042C 1185 nt17.62■□□□□ 0.41
MDR1P53258 RPP1BYDL130W 321 nt17.52■□□□□ 0.4
MDR1P53258 DBP2YNL112W 1641 nt17.35■□□□□ 0.37
MDR1P53258 TRN1tP(UGG)A 72 nt17.34■□□□□ 0.37
MDR1P53258 SUF9tP(UGG)F 72 nt17.34■□□□□ 0.37
MDR1P53258 SUF8tP(UGG)H 72 nt17.34■□□□□ 0.37
MDR1P53258 tP(UGG)LtP(UGG)L 72 nt17.34■□□□□ 0.37
MDR1P53258 SUF7tP(UGG)M 72 nt17.34■□□□□ 0.37
MDR1P53258 tP(UGG)N1tP(UGG)N1 72 nt17.34■□□□□ 0.37
MDR1P53258 tP(UGG)N2tP(UGG)N2 72 nt17.34■□□□□ 0.37
MDR1P53258 tP(UGG)O1tP(UGG)O1 72 nt17.34■□□□□ 0.37
MDR1P53258 SUF11tP(UGG)O2 72 nt17.34■□□□□ 0.37
MDR1P53258 CCC1YLR220W 969 nt17.23■□□□□ 0.35
MDR1P53258 SCJ1YMR214W 1134 nt17.18■□□□□ 0.34
MDR1P53258 ATS1YAL020C 1002 nt17.05■□□□□ 0.32
MDR1P53258 PET122YER153C 765 nt16.67■□□□□ 0.26
MDR1P53258 SCR1SCR1 522 nt16.67■□□□□ 0.26
MDR1P53258 YBR190WYBR190W 312 nt16.64■□□□□ 0.25
MDR1P53258 RVS167YDR388W 1449 nt16.55■□□□□ 0.24
MDR1P53258 tP(UGG)O3tP(UGG)O3 72 nt16.52■□□□□ 0.24
MDR1P53258 RTC3YHR087W 336 nt16.34■□□□□ 0.21
MDR1P53258 RRN5YLR141W 1092 nt16.23■□□□□ 0.19
MDR1P53258 RSB1YOR049C 1065 nt16.02■□□□□ 0.16
MDR1P53258 YDJ1YNL064C 1230 nt15.98■□□□□ 0.15
MDR1P53258 SHR5YOL110W 714 nt15.97■□□□□ 0.15
MDR1P53258 YER088W-BYER088W-B 147 nt15.91■□□□□ 0.14
MDR1P53258 PST2YDR032C 597 nt15.72■□□□□ 0.11
MDR1P53258 GAR1YHR089C 618 nt15.6■□□□□ 0.09
MDR1P53258 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
MDR1P53258 URN1YPR152C 1398 nt15.35■□□□□ 0.05
MDR1P53258 SSA3YBL075C 1950 nt15.31■□□□□ 0.04
MDR1P53258 YKL097CYKL097C 411 nt15.3■□□□□ 0.04
MDR1P53258 RPN10YHR200W 807 nt15.26■□□□□ 0.03
MDR1P53258 YNL208WYNL208W 600 nt15.23■□□□□ 0.03
MDR1P53258 TIR1YER011W 765 nt15.05■□□□□ -0
MDR1P53258 OPI9YLR338W 858 nt15.05■□□□□ -0
MDR1P53258 SHU1YHL006C 453 nt15.01□□□□□ -0.01
MDR1P53258 SAH1YER043C 1350 nt14.87□□□□□ -0.03
MDR1P53258 PUT4YOR348C 1884 nt14.84□□□□□ -0.03
MDR1P53258 SSA1YAL005C 1929 nt14.77□□□□□ -0.04
MDR1P53258 YAL037C-BYAL037C-B 975 nt14.71□□□□□ -0.05
MDR1P53258 YJR018WYJR018W 363 nt14.66□□□□□ -0.06
MDR1P53258 PUN1YLR414C 792 nt14.66□□□□□ -0.06
MDR1P53258 ARE1YCR048W 1833 nt14.65□□□□□ -0.06
MDR1P53258 YOR139CYOR139C 393 nt14.55□□□□□ -0.08
MDR1P53258 RPP2BYDR382W 333 nt14.52□□□□□ -0.09
MDR1P53258 YHR049C-AYHR049C-A 297 nt14.51□□□□□ -0.09
MDR1P53258 NPL3YDR432W 1245 nt14.49□□□□□ -0.09
MDR1P53258 YGR021WYGR021W 873 nt14.48□□□□□ -0.09
MDR1P53258 SRB2YHR041C 633 nt14.48□□□□□ -0.09
MDR1P53258 POA1YBR022W 534 nt14.44□□□□□ -0.1
MDR1P53258 WWM1YFL010C 636 nt14.41□□□□□ -0.1
MDR1P53258 PTC2YER089C 1395 nt14.41□□□□□ -0.1
MDR1P53258 HOM6YJR139C 1080 nt14.37□□□□□ -0.11
MDR1P53258 YJR120WYJR120W 351 nt14.36□□□□□ -0.11
MDR1P53258 MNP1YGL068W 585 nt14.33□□□□□ -0.12
MDR1P53258 YOL037CYOL037C 354 nt14.27□□□□□ -0.13
MDR1P53258 BUD23YCR047C 828 nt14.24□□□□□ -0.13
MDR1P53258 YFL021C-AYFL021C-A 855 nt14.21□□□□□ -0.13
MDR1P53258 BDH2YAL061W 1254 nt14.2□□□□□ -0.14
MDR1P53258 NAB2YGL122C 1578 nt14.2□□□□□ -0.14
MDR1P53258 RKM5YLR137W 1104 nt14.18□□□□□ -0.14
MDR1P53258 BSC6YOL137W 1494 nt14.16□□□□□ -0.14
MDR1P53258 INM2YDR287W 879 nt14.13□□□□□ -0.15
MDR1P53258 LSM3YLR438C-A 270 nt14.09□□□□□ -0.15
MDR1P53258 FPR4YLR449W 1179 nt14.08□□□□□ -0.16
MDR1P53258 DAL1YIR027C 1383 nt14.07□□□□□ -0.16
MDR1P53258 YBL100CYBL100C 315 nt14.03□□□□□ -0.16
MDR1P53258 tM(CAU)CtM(CAU)C 72 nt13.98□□□□□ -0.17
MDR1P53258 IMT4tM(CAU)E 72 nt13.98□□□□□ -0.17
MDR1P53258 IMT3tM(CAU)J3 72 nt13.98□□□□□ -0.17
MDR1P53258 IMT1tM(CAU)O1 72 nt13.98□□□□□ -0.17
MDR1P53258 IMT2tM(CAU)P 72 nt13.98□□□□□ -0.17
MDR1P53258 FIS1YIL065C 468 nt13.95□□□□□ -0.18
MDR1P53258 TRM9YML014W 840 nt13.93□□□□□ -0.18
MDR1P53258 PHO4YFR034C 939 nt13.9□□□□□ -0.18
MDR1P53258 SPT5YML010W 3192 nt13.87□□□□□ -0.19
MDR1P53258 YLR281CYLR281C 468 nt13.87□□□□□ -0.19
MDR1P53258 FUN26YAL022C 1554 nt13.85□□□□□ -0.19
MDR1P53258 PUS2YGL063W 1113 nt13.85□□□□□ -0.19
MDR1P53258 WHI5YOR083W 888 nt13.8□□□□□ -0.2
MDR1P53258 CCT6YDR188W 1641 nt13.72□□□□□ -0.21
MDR1P53258 SSA4YER103W 1929 nt13.71□□□□□ -0.21
MDR1P53258 ALF1YNL148C 765 nt13.67□□□□□ -0.22
MDR1P53258 SUF2tP(AGG)C 72 nt13.66□□□□□ -0.22
MDR1P53258 SUF10tP(AGG)N 72 nt13.66□□□□□ -0.22
MDR1P53258 YLR154C-GYLR154C-G 150 nt13.6□□□□□ -0.23
MDR1P53258 IMP2'YIL154C 1041 nt13.57□□□□□ -0.24
MDR1P53258 MOT3YMR070W 1473 nt13.56□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms