Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 NSR1YGR159C 1245 nt16.7■□□□□ 0.26
RPD3P32561 YML009W-BYML009W-B 477 nt16.31■□□□□ 0.2
RPD3P32561 NOP1YDL014W 984 nt15.86■□□□□ 0.13
RPD3P32561 MDJ1YFL016C 1536 nt15.41■□□□□ 0.06
RPD3P32561 YKL036CYKL036C 393 nt14.48□□□□□ -0.09
RPD3P32561 YJL027CYJL027C 417 nt14.16□□□□□ -0.14
RPD3P32561 SRX1YKL086W 384 nt13.81□□□□□ -0.2
RPD3P32561 Q0297Q0297 156 nt13.79□□□□□ -0.2
RPD3P32561 DBP2YNL112W 1641 nt13.38□□□□□ -0.27
RPD3P32561 YBR190WYBR190W 312 nt13.31□□□□□ -0.28
RPD3P32561 SCS3YGL126W 1143 nt13.28□□□□□ -0.28
RPD3P32561 SSA3YBL075C 1950 nt13.27□□□□□ -0.29
RPD3P32561 YCR051WYCR051W 669 nt13.1□□□□□ -0.31
RPD3P32561 RTC3YHR087W 336 nt12.99□□□□□ -0.33
RPD3P32561 Q0182Q0182 405 nt12.69□□□□□ -0.38
RPD3P32561 TRN1tP(UGG)A 72 nt12.64□□□□□ -0.39
RPD3P32561 SUF9tP(UGG)F 72 nt12.64□□□□□ -0.39
RPD3P32561 SUF8tP(UGG)H 72 nt12.64□□□□□ -0.39
RPD3P32561 tP(UGG)LtP(UGG)L 72 nt12.64□□□□□ -0.39
RPD3P32561 SUF7tP(UGG)M 72 nt12.64□□□□□ -0.39
RPD3P32561 tP(UGG)N1tP(UGG)N1 72 nt12.64□□□□□ -0.39
RPD3P32561 tP(UGG)N2tP(UGG)N2 72 nt12.64□□□□□ -0.39
RPD3P32561 tP(UGG)O1tP(UGG)O1 72 nt12.64□□□□□ -0.39
RPD3P32561 SUF11tP(UGG)O2 72 nt12.64□□□□□ -0.39
RPD3P32561 PUT4YOR348C 1884 nt12.57□□□□□ -0.4
RPD3P32561 CCC1YLR220W 969 nt12.53□□□□□ -0.4
RPD3P32561 YOL085CYOL085C 342 nt12.52□□□□□ -0.41
RPD3P32561 MOT3YMR070W 1473 nt12.46□□□□□ -0.42
RPD3P32561 RVS167YDR388W 1449 nt12.45□□□□□ -0.42
RPD3P32561 RPP1BYDL130W 321 nt12.38□□□□□ -0.43
RPD3P32561 PKP1YIL042C 1185 nt12.33□□□□□ -0.44
RPD3P32561 SCJ1YMR214W 1134 nt12.26□□□□□ -0.45
RPD3P32561 POA1YBR022W 534 nt12.14□□□□□ -0.47
RPD3P32561 ARE1YCR048W 1833 nt12.14□□□□□ -0.47
RPD3P32561 YHR049C-AYHR049C-A 297 nt11.99□□□□□ -0.49
RPD3P32561 BSC6YOL137W 1494 nt11.98□□□□□ -0.49
RPD3P32561 ATS1YAL020C 1002 nt11.98□□□□□ -0.49
RPD3P32561 SAH1YER043C 1350 nt11.97□□□□□ -0.49
RPD3P32561 URN1YPR152C 1398 nt11.92□□□□□ -0.5
RPD3P32561 SPT5YML010W 3192 nt11.87□□□□□ -0.51
RPD3P32561 OPI9YLR338W 858 nt11.87□□□□□ -0.51
RPD3P32561 SHR5YOL110W 714 nt11.86□□□□□ -0.51
RPD3P32561 tP(UGG)O3tP(UGG)O3 72 nt11.84□□□□□ -0.51
RPD3P32561 PET122YER153C 765 nt11.82□□□□□ -0.52
RPD3P32561 SSA4YER103W 1929 nt11.78□□□□□ -0.52
RPD3P32561 DEP1YAL013W 1218 nt11.75□□□□□ -0.53
RPD3P32561 SCR1SCR1 522 nt11.72□□□□□ -0.53
RPD3P32561 BUD23YCR047C 828 nt11.68□□□□□ -0.54
RPD3P32561 RPN10YHR200W 807 nt11.6□□□□□ -0.55
RPD3P32561 PUN1YLR414C 792 nt11.52□□□□□ -0.57
RPD3P32561 PTC2YER089C 1395 nt11.5□□□□□ -0.57
RPD3P32561 YNL208WYNL208W 600 nt11.49□□□□□ -0.57
RPD3P32561 RRN5YLR141W 1092 nt11.48□□□□□ -0.57
RPD3P32561 YDJ1YNL064C 1230 nt11.47□□□□□ -0.57
RPD3P32561 NAB2YGL122C 1578 nt11.43□□□□□ -0.58
RPD3P32561 FPS1YLL043W 2010 nt11.39□□□□□ -0.59
RPD3P32561 BDF1YLR399C 2061 nt11.38□□□□□ -0.59
RPD3P32561 SSA1YAL005C 1929 nt11.35□□□□□ -0.59
RPD3P32561 NVJ2YPR091C 2313 nt11.34□□□□□ -0.59
RPD3P32561 YJR018WYJR018W 363 nt11.33□□□□□ -0.6
RPD3P32561 MEP2YNL142W 1500 nt11.31□□□□□ -0.6
RPD3P32561 PAC11YDR488C 1602 nt11.31□□□□□ -0.6
RPD3P32561 YER088W-BYER088W-B 147 nt11.25□□□□□ -0.61
RPD3P32561 GAR1YHR089C 618 nt11.24□□□□□ -0.61
RPD3P32561 RSB1YOR049C 1065 nt11.22□□□□□ -0.61
RPD3P32561 TAT1YBR069C 1860 nt11.21□□□□□ -0.61
RPD3P32561 FIS1YIL065C 468 nt11.19□□□□□ -0.62
RPD3P32561 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
RPD3P32561 FPR4YLR449W 1179 nt11.14□□□□□ -0.63
RPD3P32561 DCW1YKL046C 1350 nt11.12□□□□□ -0.63
RPD3P32561 YPS1YLR120C 1710 nt11.06□□□□□ -0.64
RPD3P32561 PHO4YFR034C 939 nt11.05□□□□□ -0.64
RPD3P32561 PST2YDR032C 597 nt11.04□□□□□ -0.64
RPD3P32561 INM2YDR287W 879 nt11.01□□□□□ -0.65
RPD3P32561 YJR120WYJR120W 351 nt11.01□□□□□ -0.65
RPD3P32561 YHR165W-AYHR165W-A 312 nt10.99□□□□□ -0.65
RPD3P32561 YBR220CYBR220C 1683 nt10.97□□□□□ -0.65
RPD3P32561 EMI2YDR516C 1503 nt10.95□□□□□ -0.66
RPD3P32561 RPP2BYDR382W 333 nt10.94□□□□□ -0.66
RPD3P32561 YMR090WYMR090W 684 nt10.94□□□□□ -0.66
RPD3P32561 YDR095CYDR095C 411 nt10.88□□□□□ -0.67
RPD3P32561 TIR1YER011W 765 nt10.88□□□□□ -0.67
RPD3P32561 YDL221WYDL221W 552 nt10.82□□□□□ -0.68
RPD3P32561 SDH1YKL148C 1923 nt10.81□□□□□ -0.68
RPD3P32561 YBL100CYBL100C 315 nt10.8□□□□□ -0.68
RPD3P32561 YKL097CYKL097C 411 nt10.78□□□□□ -0.68
RPD3P32561 CAC2YML102W 1407 nt10.75□□□□□ -0.69
RPD3P32561 PTP1YDL230W 1008 nt10.71□□□□□ -0.69
RPD3P32561 PCH2YBR186W 1695 nt10.7□□□□□ -0.7
RPD3P32561 RPP2AYOL039W 321 nt10.69□□□□□ -0.7
RPD3P32561 GUT2YIL155C 1950 nt10.67□□□□□ -0.7
RPD3P32561 SEC11YIR022W 504 nt10.66□□□□□ -0.7
RPD3P32561 SCC4YER147C 1875 nt10.66□□□□□ -0.7
RPD3P32561 FUN26YAL022C 1554 nt10.65□□□□□ -0.7
RPD3P32561 ALF1YNL148C 765 nt10.64□□□□□ -0.71
RPD3P32561 BDH2YAL061W 1254 nt10.61□□□□□ -0.71
RPD3P32561 IRC15YPL017C 1500 nt10.58□□□□□ -0.72
RPD3P32561 SRB2YHR041C 633 nt10.58□□□□□ -0.72
RPD3P32561 NME1NME1 340 nt10.54□□□□□ -0.72
RPD3P32561 GIS3YLR094C 1509 nt10.53□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms