Protein–RNA interactions for Protein: P38817

GGA2, ADP-ribosylation factor-binding protein GGA2, yeastyeast

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA2P38817 YML009W-BYML009W-B 477 nt21.03■□□□□ 0.96
GGA2P38817 NOP1YDL014W 984 nt20.65■□□□□ 0.9
GGA2P38817 NSR1YGR159C 1245 nt20.59■□□□□ 0.89
GGA2P38817 YKL036CYKL036C 393 nt19.3■□□□□ 0.68
GGA2P38817 YJL027CYJL027C 417 nt18.09■□□□□ 0.49
GGA2P38817 Q0297Q0297 156 nt18.08■□□□□ 0.48
GGA2P38817 SRX1YKL086W 384 nt17.96■□□□□ 0.47
GGA2P38817 MDJ1YFL016C 1536 nt17.94■□□□□ 0.46
GGA2P38817 SCS3YGL126W 1143 nt17.66■□□□□ 0.42
GGA2P38817 YCR051WYCR051W 669 nt17.11■□□□□ 0.33
GGA2P38817 YOL085CYOL085C 342 nt16.64■□□□□ 0.25
GGA2P38817 PKP1YIL042C 1185 nt16.35■□□□□ 0.21
GGA2P38817 RPP1BYDL130W 321 nt16.25■□□□□ 0.19
GGA2P38817 SCJ1YMR214W 1134 nt16.14■□□□□ 0.17
GGA2P38817 TRN1tP(UGG)A 72 nt16.01■□□□□ 0.15
GGA2P38817 SUF9tP(UGG)F 72 nt16.01■□□□□ 0.15
GGA2P38817 SUF8tP(UGG)H 72 nt16.01■□□□□ 0.15
GGA2P38817 tP(UGG)LtP(UGG)L 72 nt16.01■□□□□ 0.15
GGA2P38817 SUF7tP(UGG)M 72 nt16.01■□□□□ 0.15
GGA2P38817 tP(UGG)N1tP(UGG)N1 72 nt16.01■□□□□ 0.15
GGA2P38817 tP(UGG)N2tP(UGG)N2 72 nt16.01■□□□□ 0.15
GGA2P38817 tP(UGG)O1tP(UGG)O1 72 nt16.01■□□□□ 0.15
GGA2P38817 SUF11tP(UGG)O2 72 nt16.01■□□□□ 0.15
GGA2P38817 ATS1YAL020C 1002 nt15.9■□□□□ 0.14
GGA2P38817 DBP2YNL112W 1641 nt15.9■□□□□ 0.14
GGA2P38817 CCC1YLR220W 969 nt15.89■□□□□ 0.13
GGA2P38817 SCR1SCR1 522 nt15.5■□□□□ 0.07
GGA2P38817 PET122YER153C 765 nt15.43■□□□□ 0.06
GGA2P38817 YBR190WYBR190W 312 nt15.31■□□□□ 0.04
GGA2P38817 tP(UGG)O3tP(UGG)O3 72 nt15.27■□□□□ 0.04
GGA2P38817 RVS167YDR388W 1449 nt15.26■□□□□ 0.03
GGA2P38817 RRN5YLR141W 1092 nt15.03■□□□□ -0
GGA2P38817 RTC3YHR087W 336 nt14.98□□□□□ -0.01
GGA2P38817 SSA3YBL075C 1950 nt14.91□□□□□ -0.02
GGA2P38817 RSB1YOR049C 1065 nt14.9□□□□□ -0.02
GGA2P38817 YDJ1YNL064C 1230 nt14.79□□□□□ -0.04
GGA2P38817 YER088W-BYER088W-B 147 nt14.73□□□□□ -0.05
GGA2P38817 SHR5YOL110W 714 nt14.72□□□□□ -0.05
GGA2P38817 PST2YDR032C 597 nt14.63□□□□□ -0.07
GGA2P38817 Q0182Q0182 405 nt14.62□□□□□ -0.07
GGA2P38817 GAR1YHR089C 618 nt14.41□□□□□ -0.1
GGA2P38817 PUT4YOR348C 1884 nt14.36□□□□□ -0.11
GGA2P38817 YKL097CYKL097C 411 nt14.33□□□□□ -0.12
GGA2P38817 DEP1YAL013W 1218 nt14.16□□□□□ -0.14
GGA2P38817 URN1YPR152C 1398 nt14.09□□□□□ -0.15
GGA2P38817 RPN10YHR200W 807 nt14.09□□□□□ -0.15
GGA2P38817 MOT3YMR070W 1473 nt14.06□□□□□ -0.16
GGA2P38817 YNL208WYNL208W 600 nt14.03□□□□□ -0.16
GGA2P38817 ARE1YCR048W 1833 nt13.97□□□□□ -0.17
GGA2P38817 SHU1YHL006C 453 nt13.96□□□□□ -0.17
GGA2P38817 TIR1YER011W 765 nt13.9□□□□□ -0.18
GGA2P38817 POA1YBR022W 534 nt13.85□□□□□ -0.19
GGA2P38817 SAH1YER043C 1350 nt13.83□□□□□ -0.2
GGA2P38817 OPI9YLR338W 858 nt13.81□□□□□ -0.2
GGA2P38817 YHR049C-AYHR049C-A 297 nt13.76□□□□□ -0.21
GGA2P38817 BSC6YOL137W 1494 nt13.64□□□□□ -0.23
GGA2P38817 YAL037C-BYAL037C-B 975 nt13.64□□□□□ -0.23
GGA2P38817 SSA1YAL005C 1929 nt13.59□□□□□ -0.23
GGA2P38817 YOR139CYOR139C 393 nt13.56□□□□□ -0.24
GGA2P38817 NPL3YDR432W 1245 nt13.54□□□□□ -0.24
GGA2P38817 YJR018WYJR018W 363 nt13.48□□□□□ -0.25
GGA2P38817 PUN1YLR414C 792 nt13.47□□□□□ -0.25
GGA2P38817 SPT5YML010W 3192 nt13.45□□□□□ -0.26
GGA2P38817 YGR021WYGR021W 873 nt13.44□□□□□ -0.26
GGA2P38817 RPP2BYDR382W 333 nt13.39□□□□□ -0.27
GGA2P38817 BUD23YCR047C 828 nt13.37□□□□□ -0.27
GGA2P38817 SRB2YHR041C 633 nt13.32□□□□□ -0.28
GGA2P38817 HOM6YJR139C 1080 nt13.31□□□□□ -0.28
GGA2P38817 WWM1YFL010C 636 nt13.3□□□□□ -0.28
GGA2P38817 YOL037CYOL037C 354 nt13.3□□□□□ -0.28
GGA2P38817 MNP1YGL068W 585 nt13.28□□□□□ -0.28
GGA2P38817 PTC2YER089C 1395 nt13.28□□□□□ -0.28
GGA2P38817 YJR120WYJR120W 351 nt13.18□□□□□ -0.3
GGA2P38817 YFL021C-AYFL021C-A 855 nt13.16□□□□□ -0.3
GGA2P38817 RKM5YLR137W 1104 nt13.14□□□□□ -0.31
GGA2P38817 SSA4YER103W 1929 nt13.12□□□□□ -0.31
GGA2P38817 NAB2YGL122C 1578 nt13.11□□□□□ -0.31
GGA2P38817 BDH2YAL061W 1254 nt13.09□□□□□ -0.31
GGA2P38817 tM(CAU)CtM(CAU)C 72 nt13.03□□□□□ -0.32
GGA2P38817 IMT4tM(CAU)E 72 nt13.03□□□□□ -0.32
GGA2P38817 IMT3tM(CAU)J3 72 nt13.03□□□□□ -0.32
GGA2P38817 IMT1tM(CAU)O1 72 nt13.03□□□□□ -0.32
GGA2P38817 IMT2tM(CAU)P 72 nt13.03□□□□□ -0.32
GGA2P38817 INM2YDR287W 879 nt13□□□□□ -0.33
GGA2P38817 LSM3YLR438C-A 270 nt13□□□□□ -0.33
GGA2P38817 FIS1YIL065C 468 nt12.99□□□□□ -0.33
GGA2P38817 FPR4YLR449W 1179 nt12.91□□□□□ -0.34
GGA2P38817 PUS2YGL063W 1113 nt12.89□□□□□ -0.35
GGA2P38817 YBL100CYBL100C 315 nt12.89□□□□□ -0.35
GGA2P38817 DAL1YIR027C 1383 nt12.89□□□□□ -0.35
GGA2P38817 YLR281CYLR281C 468 nt12.87□□□□□ -0.35
GGA2P38817 MEP2YNL142W 1500 nt12.83□□□□□ -0.35
GGA2P38817 TRM9YML014W 840 nt12.82□□□□□ -0.36
GGA2P38817 WHI5YOR083W 888 nt12.8□□□□□ -0.36
GGA2P38817 PHO4YFR034C 939 nt12.79□□□□□ -0.36
GGA2P38817 NVJ2YPR091C 2313 nt12.73□□□□□ -0.37
GGA2P38817 FUN26YAL022C 1554 nt12.73□□□□□ -0.37
GGA2P38817 YPS1YLR120C 1710 nt12.71□□□□□ -0.38
GGA2P38817 DCW1YKL046C 1350 nt12.7□□□□□ -0.38
GGA2P38817 BDF1YLR399C 2061 nt12.7□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms