Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YML009W-BYML009W-B 477 nt19.86■□□□□ 0.77
NDE1P40215 NSR1YGR159C 1245 nt19.74■□□□□ 0.75
NDE1P40215 NOP1YDL014W 984 nt19.34■□□□□ 0.69
NDE1P40215 YKL036CYKL036C 393 nt17.8■□□□□ 0.44
NDE1P40215 MDJ1YFL016C 1536 nt17.5■□□□□ 0.39
NDE1P40215 Q0297Q0297 156 nt16.88■□□□□ 0.29
NDE1P40215 SRX1YKL086W 384 nt16.85■□□□□ 0.29
NDE1P40215 YJL027CYJL027C 417 nt16.63■□□□□ 0.25
NDE1P40215 SCS3YGL126W 1143 nt16.17■□□□□ 0.18
NDE1P40215 YCR051WYCR051W 669 nt16.01■□□□□ 0.15
NDE1P40215 DBP2YNL112W 1641 nt15.45■□□□□ 0.06
NDE1P40215 YOL085CYOL085C 342 nt15.4■□□□□ 0.06
NDE1P40215 TRN1tP(UGG)A 72 nt15.23■□□□□ 0.03
NDE1P40215 SUF9tP(UGG)F 72 nt15.23■□□□□ 0.03
NDE1P40215 SUF8tP(UGG)H 72 nt15.23■□□□□ 0.03
NDE1P40215 tP(UGG)LtP(UGG)L 72 nt15.23■□□□□ 0.03
NDE1P40215 SUF7tP(UGG)M 72 nt15.23■□□□□ 0.03
NDE1P40215 tP(UGG)N1tP(UGG)N1 72 nt15.23■□□□□ 0.03
NDE1P40215 tP(UGG)N2tP(UGG)N2 72 nt15.23■□□□□ 0.03
NDE1P40215 tP(UGG)O1tP(UGG)O1 72 nt15.23■□□□□ 0.03
NDE1P40215 SUF11tP(UGG)O2 72 nt15.23■□□□□ 0.03
NDE1P40215 RPP1BYDL130W 321 nt15.16■□□□□ 0.02
NDE1P40215 PKP1YIL042C 1185 nt15.16■□□□□ 0.02
NDE1P40215 CCC1YLR220W 969 nt15.11■□□□□ 0.01
NDE1P40215 YBR190WYBR190W 312 nt14.95□□□□□ -0.02
NDE1P40215 RTC3YHR087W 336 nt14.65□□□□□ -0.06
NDE1P40215 RVS167YDR388W 1449 nt14.63□□□□□ -0.07
NDE1P40215 ATS1YAL020C 1002 nt14.47□□□□□ -0.09
NDE1P40215 PET122YER153C 765 nt14.46□□□□□ -0.09
NDE1P40215 SCJ1YMR214W 1134 nt14.46□□□□□ -0.09
NDE1P40215 tP(UGG)O3tP(UGG)O3 72 nt14.41□□□□□ -0.1
NDE1P40215 SCR1SCR1 522 nt14.36□□□□□ -0.11
NDE1P40215 SHR5YOL110W 714 nt14.08□□□□□ -0.16
NDE1P40215 SSA3YBL075C 1950 nt14.08□□□□□ -0.16
NDE1P40215 RRN5YLR141W 1092 nt14.05□□□□□ -0.16
NDE1P40215 YDJ1YNL064C 1230 nt13.95□□□□□ -0.18
NDE1P40215 Q0182Q0182 405 nt13.85□□□□□ -0.19
NDE1P40215 YER088W-BYER088W-B 147 nt13.78□□□□□ -0.2
NDE1P40215 RSB1YOR049C 1065 nt13.78□□□□□ -0.2
NDE1P40215 URN1YPR152C 1398 nt13.69□□□□□ -0.22
NDE1P40215 DEP1YAL013W 1218 nt13.67□□□□□ -0.22
NDE1P40215 GAR1YHR089C 618 nt13.65□□□□□ -0.22
NDE1P40215 PUT4YOR348C 1884 nt13.54□□□□□ -0.24
NDE1P40215 RPN10YHR200W 807 nt13.53□□□□□ -0.24
NDE1P40215 OPI9YLR338W 858 nt13.48□□□□□ -0.25
NDE1P40215 YNL208WYNL208W 600 nt13.47□□□□□ -0.25
NDE1P40215 PST2YDR032C 597 nt13.39□□□□□ -0.27
NDE1P40215 SAH1YER043C 1350 nt13.39□□□□□ -0.27
NDE1P40215 ARE1YCR048W 1833 nt13.29□□□□□ -0.28
NDE1P40215 TIR1YER011W 765 nt13.19□□□□□ -0.3
NDE1P40215 YHR049C-AYHR049C-A 297 nt13.15□□□□□ -0.3
NDE1P40215 POA1YBR022W 534 nt13.14□□□□□ -0.31
NDE1P40215 MOT3YMR070W 1473 nt13.14□□□□□ -0.31
NDE1P40215 PUN1YLR414C 792 nt13.12□□□□□ -0.31
NDE1P40215 YJR018WYJR018W 363 nt13.06□□□□□ -0.32
NDE1P40215 SSA1YAL005C 1929 nt13□□□□□ -0.33
NDE1P40215 PTC2YER089C 1395 nt12.94□□□□□ -0.34
NDE1P40215 YKL097CYKL097C 411 nt12.89□□□□□ -0.35
NDE1P40215 BUD23YCR047C 828 nt12.88□□□□□ -0.35
NDE1P40215 BSC6YOL137W 1494 nt12.85□□□□□ -0.35
NDE1P40215 SHU1YHL006C 453 nt12.84□□□□□ -0.35
NDE1P40215 RPP2BYDR382W 333 nt12.83□□□□□ -0.36
NDE1P40215 YJR120WYJR120W 351 nt12.79□□□□□ -0.36
NDE1P40215 NAB2YGL122C 1578 nt12.78□□□□□ -0.36
NDE1P40215 SRB2YHR041C 633 nt12.73□□□□□ -0.37
NDE1P40215 YAL037C-BYAL037C-B 975 nt12.65□□□□□ -0.38
NDE1P40215 DAL1YIR027C 1383 nt12.61□□□□□ -0.39
NDE1P40215 INM2YDR287W 879 nt12.61□□□□□ -0.39
NDE1P40215 FPR4YLR449W 1179 nt12.6□□□□□ -0.39
NDE1P40215 WWM1YFL010C 636 nt12.59□□□□□ -0.39
NDE1P40215 YGR021WYGR021W 873 nt12.56□□□□□ -0.4
NDE1P40215 FIS1YIL065C 468 nt12.56□□□□□ -0.4
NDE1P40215 BDH2YAL061W 1254 nt12.54□□□□□ -0.4
NDE1P40215 PHO4YFR034C 939 nt12.48□□□□□ -0.41
NDE1P40215 YBL100CYBL100C 315 nt12.48□□□□□ -0.41
NDE1P40215 HOM6YJR139C 1080 nt12.47□□□□□ -0.41
NDE1P40215 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
NDE1P40215 MNP1YGL068W 585 nt12.4□□□□□ -0.42
NDE1P40215 LSM3YLR438C-A 270 nt12.39□□□□□ -0.43
NDE1P40215 SPT5YML010W 3192 nt12.36□□□□□ -0.43
NDE1P40215 SSA4YER103W 1929 nt12.35□□□□□ -0.43
NDE1P40215 TRM9YML014W 840 nt12.33□□□□□ -0.44
NDE1P40215 FUN26YAL022C 1554 nt12.32□□□□□ -0.44
NDE1P40215 YOR139CYOR139C 393 nt12.32□□□□□ -0.44
NDE1P40215 RKM5YLR137W 1104 nt12.3□□□□□ -0.44
NDE1P40215 NPL3YDR432W 1245 nt12.29□□□□□ -0.44
NDE1P40215 YOL037CYOL037C 354 nt12.23□□□□□ -0.45
NDE1P40215 YPS1YLR120C 1710 nt12.23□□□□□ -0.45
NDE1P40215 ALF1YNL148C 765 nt12.19□□□□□ -0.46
NDE1P40215 CCT6YDR188W 1641 nt12.17□□□□□ -0.46
NDE1P40215 YDR095CYDR095C 411 nt12.15□□□□□ -0.46
NDE1P40215 YHR165W-AYHR165W-A 312 nt12.12□□□□□ -0.47
NDE1P40215 SUF2tP(AGG)C 72 nt12.11□□□□□ -0.47
NDE1P40215 SUF10tP(AGG)N 72 nt12.11□□□□□ -0.47
NDE1P40215 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
NDE1P40215 BDF1YLR399C 2061 nt11.95□□□□□ -0.5
NDE1P40215 SIS1YNL007C 1059 nt11.95□□□□□ -0.5
NDE1P40215 YLR281CYLR281C 468 nt11.93□□□□□ -0.5
NDE1P40215 RPP2AYOL039W 321 nt11.93□□□□□ -0.5
NDE1P40215 WHI5YOR083W 888 nt11.9□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 10.5 ms