Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 YML009W-BYML009W-B 477 nt25.29■■□□□ 1.64
BDF2Q07442 NOP1YDL014W 984 nt24.78■■□□□ 1.56
BDF2Q07442 NSR1YGR159C 1245 nt24.64■■□□□ 1.54
BDF2Q07442 YKL036CYKL036C 393 nt23.36■■□□□ 1.33
BDF2Q07442 YJL027CYJL027C 417 nt21.92■■□□□ 1.1
BDF2Q07442 Q0297Q0297 156 nt21.86■■□□□ 1.09
BDF2Q07442 SRX1YKL086W 384 nt21.65■■□□□ 1.06
BDF2Q07442 SCS3YGL126W 1143 nt21.53■■□□□ 1.04
BDF2Q07442 MDJ1YFL016C 1536 nt21.42■■□□□ 1.02
BDF2Q07442 YCR051WYCR051W 669 nt20.61■□□□□ 0.89
BDF2Q07442 YOL085CYOL085C 342 nt20.22■□□□□ 0.83
BDF2Q07442 PKP1YIL042C 1185 nt19.87■□□□□ 0.77
BDF2Q07442 SCJ1YMR214W 1134 nt19.7■□□□□ 0.74
BDF2Q07442 RPP1BYDL130W 321 nt19.62■□□□□ 0.73
BDF2Q07442 ATS1YAL020C 1002 nt19.4■□□□□ 0.7
BDF2Q07442 TRN1tP(UGG)A 72 nt19.27■□□□□ 0.68
BDF2Q07442 SUF9tP(UGG)F 72 nt19.27■□□□□ 0.68
BDF2Q07442 SUF8tP(UGG)H 72 nt19.27■□□□□ 0.68
BDF2Q07442 tP(UGG)LtP(UGG)L 72 nt19.27■□□□□ 0.68
BDF2Q07442 SUF7tP(UGG)M 72 nt19.27■□□□□ 0.68
BDF2Q07442 tP(UGG)N1tP(UGG)N1 72 nt19.27■□□□□ 0.68
BDF2Q07442 tP(UGG)N2tP(UGG)N2 72 nt19.27■□□□□ 0.68
BDF2Q07442 tP(UGG)O1tP(UGG)O1 72 nt19.27■□□□□ 0.68
BDF2Q07442 SUF11tP(UGG)O2 72 nt19.27■□□□□ 0.68
BDF2Q07442 DBP2YNL112W 1641 nt19.14■□□□□ 0.66
BDF2Q07442 CCC1YLR220W 969 nt19.11■□□□□ 0.65
BDF2Q07442 PET122YER153C 765 nt18.69■□□□□ 0.58
BDF2Q07442 SCR1SCR1 522 nt18.64■□□□□ 0.57
BDF2Q07442 tP(UGG)O3tP(UGG)O3 72 nt18.41■□□□□ 0.54
BDF2Q07442 RRN5YLR141W 1092 nt18.21■□□□□ 0.51
BDF2Q07442 RVS167YDR388W 1449 nt18.13■□□□□ 0.49
BDF2Q07442 YBR190WYBR190W 312 nt18.1■□□□□ 0.49
BDF2Q07442 RSB1YOR049C 1065 nt18■□□□□ 0.47
BDF2Q07442 RTC3YHR087W 336 nt17.96■□□□□ 0.47
BDF2Q07442 PST2YDR032C 597 nt17.88■□□□□ 0.45
BDF2Q07442 YER088W-BYER088W-B 147 nt17.85■□□□□ 0.45
BDF2Q07442 YDJ1YNL064C 1230 nt17.79■□□□□ 0.44
BDF2Q07442 SHR5YOL110W 714 nt17.61■□□□□ 0.41
BDF2Q07442 YKL097CYKL097C 411 nt17.46■□□□□ 0.39
BDF2Q07442 GAR1YHR089C 618 nt17.34■□□□□ 0.37
BDF2Q07442 SHU1YHL006C 453 nt17.04■□□□□ 0.32
BDF2Q07442 DEP1YAL013W 1218 nt16.96■□□□□ 0.31
BDF2Q07442 URN1YPR152C 1398 nt16.8■□□□□ 0.28
BDF2Q07442 YNL208WYNL208W 600 nt16.73■□□□□ 0.27
BDF2Q07442 TIR1YER011W 765 nt16.72■□□□□ 0.27
BDF2Q07442 RPN10YHR200W 807 nt16.68■□□□□ 0.26
BDF2Q07442 YOR139CYOR139C 393 nt16.66■□□□□ 0.26
BDF2Q07442 YAL037C-BYAL037C-B 975 nt16.63■□□□□ 0.25
BDF2Q07442 OPI9YLR338W 858 nt16.44■□□□□ 0.22
BDF2Q07442 SSA1YAL005C 1929 nt16.41■□□□□ 0.22
BDF2Q07442 NPL3YDR432W 1245 nt16.41■□□□□ 0.22
BDF2Q07442 SRB2YHR041C 633 nt16.24■□□□□ 0.19
BDF2Q07442 SAH1YER043C 1350 nt16.21■□□□□ 0.19
BDF2Q07442 YGR021WYGR021W 873 nt16.14■□□□□ 0.17
BDF2Q07442 MNP1YGL068W 585 nt16.13■□□□□ 0.17
BDF2Q07442 HOM6YJR139C 1080 nt16.11■□□□□ 0.17
BDF2Q07442 WWM1YFL010C 636 nt16.08■□□□□ 0.16
BDF2Q07442 YJR018WYJR018W 363 nt16.07■□□□□ 0.16
BDF2Q07442 YOL037CYOL037C 354 nt16.05■□□□□ 0.16
BDF2Q07442 PUT4YOR348C 1884 nt16.02■□□□□ 0.16
BDF2Q07442 tM(CAU)CtM(CAU)C 72 nt15.98■□□□□ 0.15
BDF2Q07442 IMT4tM(CAU)E 72 nt15.98■□□□□ 0.15
BDF2Q07442 IMT3tM(CAU)J3 72 nt15.98■□□□□ 0.15
BDF2Q07442 IMT1tM(CAU)O1 72 nt15.98■□□□□ 0.15
BDF2Q07442 IMT2tM(CAU)P 72 nt15.98■□□□□ 0.15
BDF2Q07442 PUN1YLR414C 792 nt15.98■□□□□ 0.15
BDF2Q07442 YJR120WYJR120W 351 nt15.93■□□□□ 0.14
BDF2Q07442 ARE1YCR048W 1833 nt15.91■□□□□ 0.14
BDF2Q07442 RPP2BYDR382W 333 nt15.89■□□□□ 0.13
BDF2Q07442 RKM5YLR137W 1104 nt15.88■□□□□ 0.13
BDF2Q07442 YFL021C-AYFL021C-A 855 nt15.8■□□□□ 0.12
BDF2Q07442 YHR049C-AYHR049C-A 297 nt15.71■□□□□ 0.11
BDF2Q07442 PTC2YER089C 1395 nt15.7■□□□□ 0.1
BDF2Q07442 PUS2YGL063W 1113 nt15.68■□□□□ 0.1
BDF2Q07442 SSA3YBL075C 1950 nt15.67■□□□□ 0.1
BDF2Q07442 BDH2YAL061W 1254 nt15.65■□□□□ 0.1
BDF2Q07442 YLR281CYLR281C 468 nt15.64■□□□□ 0.09
BDF2Q07442 POA1YBR022W 534 nt15.58■□□□□ 0.08
BDF2Q07442 MOT3YMR070W 1473 nt15.56■□□□□ 0.08
BDF2Q07442 LSM3YLR438C-A 270 nt15.54■□□□□ 0.08
BDF2Q07442 WHI5YOR083W 888 nt15.52■□□□□ 0.08
BDF2Q07442 INM2YDR287W 879 nt15.41■□□□□ 0.06
BDF2Q07442 NAB2YGL122C 1578 nt15.41■□□□□ 0.06
BDF2Q07442 BUD23YCR047C 828 nt15.4■□□□□ 0.06
BDF2Q07442 YBL100CYBL100C 315 nt15.37■□□□□ 0.05
BDF2Q07442 BSC6YOL137W 1494 nt15.34■□□□□ 0.05
BDF2Q07442 DAL1YIR027C 1383 nt15.32■□□□□ 0.04
BDF2Q07442 FPR4YLR449W 1179 nt15.31■□□□□ 0.04
BDF2Q07442 FMP45YDL222C 930 nt15.29■□□□□ 0.04
BDF2Q07442 TRM9YML014W 840 nt15.27■□□□□ 0.04
BDF2Q07442 FIS1YIL065C 468 nt15.25■□□□□ 0.03
BDF2Q07442 DSK2YMR276W 1122 nt15.25■□□□□ 0.03
BDF2Q07442 YPR011CYPR011C 981 nt15.25■□□□□ 0.03
BDF2Q07442 FUN26YAL022C 1554 nt15.2■□□□□ 0.02
BDF2Q07442 YLR236CYLR236C 324 nt15.19■□□□□ 0.02
BDF2Q07442 PHO4YFR034C 939 nt15.17■□□□□ 0.02
BDF2Q07442 IMP2'YIL154C 1041 nt15.16■□□□□ 0.02
BDF2Q07442 YCH1YGR203W 447 nt15.15■□□□□ 0.02
BDF2Q07442 Q0182Q0182 405 nt15.15■□□□□ 0.02
BDF2Q07442 YLR154C-GYLR154C-G 150 nt15.13■□□□□ 0.01
Retrieved 100 of 7,029 protein–RNA pairs in 36.3 ms