RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C MTC1P47018 478 aaKnown RBP9.6□□□□□ -0.87
YIR040CYIR040C DRS1P32892 752 aaKnown RBP9.3□□□□□ -0.92
YIR040CYIR040C FAP1P53971 965 aa8.8□□□□□ -1
YIR040CYIR040C PRY3P47033 881 aa8.29□□□□□ -1.08
YIR040CYIR040C DIP2Q12220 943 aaPredicted RBP8.03□□□□□ -1.12
YIR040CYIR040C PRI1P10363 409 aa7.89□□□□□ -1.15
YIR040CYIR040C BFR2Q06631 534 aaKnown RBP7.89□□□□□ -1.15
YIR040CYIR040C AAD16Q02895 342 aa7.88□□□□□ -1.15
YIR040CYIR040C AVT3P36062 692 aa7.85□□□□□ -1.15
YIR040CYIR040C ISW2Q08773 1120 aa7.83□□□□□ -1.16
YIR040CYIR040C RPG1P38249 964 aaKnown RBP7.78□□□□□ -1.16
YIR040CYIR040C YCK3P39962 524 aa7.76□□□□□ -1.17
YIR040CYIR040C HAA1Q12753 694 aaKnown RBP7.71□□□□□ -1.18
YIR040CYIR040C RSE1Q04693 1361 aaKnown RBP7.64□□□□□ -1.19
YIR040CYIR040C TSR3Q12094 313 aaKnown RBP7.5□□□□□ -1.21
YIR040CYIR040C RPL17AP05740 184 aaKnown RBP7.42□□□□□ -1.22
YIR040CYIR040C RPL17BP46990 184 aaKnown RBP7.42□□□□□ -1.22
YIR040CYIR040C REB1P21538 810 aa7.3□□□□□ -1.24
YIR040CYIR040C TFA1P36100 482 aa7.21□□□□□ -1.26
YIR040CYIR040C MRPL32P25348 183 aa7.15□□□□□ -1.26
YIR040CYIR040C SPT21P35209 758 aa7.13□□□□□ -1.27
YIR040CYIR040C YGL015CP33199 130 aa7□□□□□ -1.29
YIR040CYIR040C YKR023WP36119 530 aaKnown RBP6.98□□□□□ -1.29
YIR040CYIR040C RIM101P33400 625 aa6.96□□□□□ -1.3
YIR040CYIR040C CDC27P38042 758 aa6.93□□□□□ -1.3
YIR040CYIR040C HOP09932 586 aa6.83□□□□□ -1.32
YIR040CYIR040C TFC8Q12308 588 aa6.82□□□□□ -1.32
YIR040CYIR040C DCD1P06773 312 aa6.8□□□□□ -1.32
YIR040CYIR040C OXP1P28273 1286 aa6.76□□□□□ -1.33
YIR040CYIR040C BUD31P25337 157 aaPredicted RBP6.73□□□□□ -1.33
YIR040CYIR040C MAP2P38174 421 aaKnown RBP6.65□□□□□ -1.34
YIR040CYIR040C BCH2P36122 765 aa6.62□□□□□ -1.35
YIR040CYIR040C UBP10P53874 792 aaPredicted RBP6.62□□□□□ -1.35
YIR040CYIR040C YIL055CP40523 627 aaKnown RBP6.58□□□□□ -1.36
YIR040CYIR040C YAH1Q12184 172 aaKnown RBP6.58□□□□□ -1.36
YIR040CYIR040C PTP3P40048 928 aa6.57□□□□□ -1.36
YIR040CYIR040C SCY1P53009 804 aa6.57□□□□□ -1.36
YIR040CYIR040C RSM7P47150 247 aa6.51□□□□□ -1.37
YIR040CYIR040C SSP1P38871 571 aa6.49□□□□□ -1.37
YIR040CYIR040C YLR271WQ06152 274 aa6.49□□□□□ -1.37
YIR040CYIR040C EPS1P40557 701 aa6.47□□□□□ -1.37
YIR040CYIR040C SLX5P32828 619 aaKnown RBP6.44□□□□□ -1.38
YIR040CYIR040C AI2P03876 854 aa6.43□□□□□ -1.38
YIR040CYIR040C BDF1P35817 686 aa6.43□□□□□ -1.38
YIR040CYIR040C SIS1P25294 352 aaKnown RBP6.37□□□□□ -1.39
YIR040CYIR040C BBC1P47068 1157 aa6.37□□□□□ -1.39
YIR040CYIR040C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
YIR040CYIR040C PSD2P53037 1138 aaKnown RBP6.35□□□□□ -1.39
YIR040CYIR040C TIF4632P39936 914 aaKnown RBP6.31□□□□□ -1.4
YIR040CYIR040C TGL3P40308 642 aa6.3□□□□□ -1.4
YIR040CYIR040C CST9Q06032 482 aa6.29□□□□□ -1.4
YIR040CYIR040C UBP9P39967 754 aa6.27□□□□□ -1.41
YIR040CYIR040C MGA2P40578 1113 aa6.26□□□□□ -1.41
YIR040CYIR040C MRM1P25270 412 aa6.23□□□□□ -1.41
YIR040CYIR040C NSR1P27476 414 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
YIR040CYIR040C RCR1P38212 213 aa6.12□□□□□ -1.43
YIR040CYIR040C MST1P07236 462 aa6.1□□□□□ -1.43
YIR040CYIR040C VPS29P38759 282 aa6.1□□□□□ -1.43
YIR040CYIR040C RTG3P38165 486 aa6.09□□□□□ -1.43
YIR040CYIR040C YAP5P40574 245 aa6.09□□□□□ -1.43
YIR040CYIR040C YOR238WQ08634 303 aa6.09□□□□□ -1.43
YIR040CYIR040C PIB1Q06651 286 aa6.05□□□□□ -1.44
YIR040CYIR040C RAM2P29703 316 aa6.02□□□□□ -1.45
YIR040CYIR040C STS1P38637 319 aa6.02□□□□□ -1.45
YIR040CYIR040C YFR006WP43590 535 aa6.02□□□□□ -1.45
YIR040CYIR040C YMR1P47147 688 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
YIR040CYIR040C DBP1P24784 617 aaKnown RBP6.01□□□□□ -1.45
YIR040CYIR040C YBL029C-AQ3E756 94 aa5.95□□□□□ -1.46
YIR040CYIR040C GTT3P39996 337 aa5.93□□□□□ -1.46
YIR040CYIR040C WSC3Q12215 556 aa5.92□□□□□ -1.46
YIR040CYIR040C VMA1P17255 1071 aaKnown RBP5.91□□□□□ -1.46
YIR040CYIR040C MAK11P20484 414 aaKnown RBP5.91□□□□□ -1.46
YIR040CYIR040C VNX1P42839 908 aa5.91□□□□□ -1.46
YIR040CYIR040C EDS1P38073 919 aa5.87□□□□□ -1.47
YIR040CYIR040C SAM3Q08986 587 aa5.87□□□□□ -1.47
YIR040CYIR040C COQ8P27697 501 aa5.85□□□□□ -1.47
YIR040CYIR040C YOL036WQ08206 761 aa5.85□□□□□ -1.47
YIR040CYIR040C MIF2P35201 549 aa5.84□□□□□ -1.47
YIR040CYIR040C SET4P42948 560 aa5.83□□□□□ -1.48
YIR040CYIR040C SPP1Q03012 353 aa5.83□□□□□ -1.48
YIR040CYIR040C DMA1P38823 416 aa5.82□□□□□ -1.48
YIR040CYIR040C TIF11P38912 153 aaKnown RBP5.82□□□□□ -1.48
YIR040CYIR040C PTC3P34221 468 aaKnown RBP5.8□□□□□ -1.48
YIR040CYIR040C MSB4Q12317 492 aa5.8□□□□□ -1.48
YIR040CYIR040C ULI1P43604 169 aa5.79□□□□□ -1.48
YIR040CYIR040C GYP5Q12344 894 aa5.79□□□□□ -1.48
YIR040CYIR040C SET1P38827 1080 aaKnown RBP5.77□□□□□ -1.49
YIR040CYIR040C IOC2Q12072 812 aa5.77□□□□□ -1.49
YIR040CYIR040C TRP5P00931 707 aaKnown RBP5.76□□□□□ -1.49
YIR040CYIR040C DCW1P36091 449 aa5.75□□□□□ -1.49
YIR040CYIR040C EAP1P36041 632 aaKnown RBP5.74□□□□□ -1.49
YIR040CYIR040C GRE2Q12068 342 aaKnown RBP5.74□□□□□ -1.49
YIR040CYIR040C NOP53Q12080 455 aaKnown RBP5.73□□□□□ -1.49
YIR040CYIR040C LDB19Q12502 818 aa5.73□□□□□ -1.49
YIR040CYIR040C YJL171CP46992 396 aa5.72□□□□□ -1.49
YIR040CYIR040C ATH1P48016 1211 aa5.72□□□□□ -1.49
YIR040CYIR040C ABP1P15891 592 aaKnown RBP5.71□□□□□ -1.5
YIR040CYIR040C GUT1P32190 709 aa5.71□□□□□ -1.5
YIR040CYIR040C SOL3P38858 249 aa5.71□□□□□ -1.5
YIR040CYIR040C HTA1P04911 132 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms