Protein–RNA interactions for Protein: P39715

ECM1, Shuttling pre-60S factor ECM1, yeastyeast

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM1P39715 NSR1YGR159C 1245 nt19.41■□□□□ 0.7
ECM1P39715 YML009W-BYML009W-B 477 nt18.69■□□□□ 0.58
ECM1P39715 MDJ1YFL016C 1536 nt18.36■□□□□ 0.53
ECM1P39715 NOP1YDL014W 984 nt17.63■□□□□ 0.41
ECM1P39715 SSA3YBL075C 1950 nt16.88■□□□□ 0.29
ECM1P39715 YJL027CYJL027C 417 nt16.71■□□□□ 0.27
ECM1P39715 DBP2YNL112W 1641 nt15.85■□□□□ 0.13
ECM1P39715 YKL036CYKL036C 393 nt15.83■□□□□ 0.12
ECM1P39715 YBR190WYBR190W 312 nt15.81■□□□□ 0.12
ECM1P39715 SRX1YKL086W 384 nt15.47■□□□□ 0.07
ECM1P39715 RTC3YHR087W 336 nt15.38■□□□□ 0.05
ECM1P39715 PUT4YOR348C 1884 nt15.27■□□□□ 0.03
ECM1P39715 Q0297Q0297 156 nt15.17■□□□□ 0.02
ECM1P39715 SPT5YML010W 3192 nt14.78□□□□□ -0.04
ECM1P39715 SSA4YER103W 1929 nt14.72□□□□□ -0.05
ECM1P39715 ARE1YCR048W 1833 nt14.67□□□□□ -0.06
ECM1P39715 TRN1tP(UGG)A 72 nt14.67□□□□□ -0.06
ECM1P39715 SUF9tP(UGG)F 72 nt14.67□□□□□ -0.06
ECM1P39715 SUF8tP(UGG)H 72 nt14.67□□□□□ -0.06
ECM1P39715 tP(UGG)LtP(UGG)L 72 nt14.67□□□□□ -0.06
ECM1P39715 SUF7tP(UGG)M 72 nt14.67□□□□□ -0.06
ECM1P39715 tP(UGG)N1tP(UGG)N1 72 nt14.67□□□□□ -0.06
ECM1P39715 tP(UGG)N2tP(UGG)N2 72 nt14.67□□□□□ -0.06
ECM1P39715 tP(UGG)O1tP(UGG)O1 72 nt14.67□□□□□ -0.06
ECM1P39715 SUF11tP(UGG)O2 72 nt14.67□□□□□ -0.06
ECM1P39715 POA1YBR022W 534 nt14.66□□□□□ -0.06
ECM1P39715 YCR051WYCR051W 669 nt14.59□□□□□ -0.07
ECM1P39715 BSC6YOL137W 1494 nt14.57□□□□□ -0.08
ECM1P39715 YHR049C-AYHR049C-A 297 nt14.47□□□□□ -0.09
ECM1P39715 RVS167YDR388W 1449 nt14.47□□□□□ -0.09
ECM1P39715 CCC1YLR220W 969 nt14.46□□□□□ -0.09
ECM1P39715 SCJ1YMR214W 1134 nt14.41□□□□□ -0.1
ECM1P39715 BDF1YLR399C 2061 nt14.3□□□□□ -0.12
ECM1P39715 SAH1YER043C 1350 nt14.3□□□□□ -0.12
ECM1P39715 SCS3YGL126W 1143 nt14.2□□□□□ -0.14
ECM1P39715 URN1YPR152C 1398 nt14.12□□□□□ -0.15
ECM1P39715 TAT1YBR069C 1860 nt14.08□□□□□ -0.16
ECM1P39715 PAC11YDR488C 1602 nt14.08□□□□□ -0.16
ECM1P39715 OPI9YLR338W 858 nt14.07□□□□□ -0.16
ECM1P39715 BUD23YCR047C 828 nt13.99□□□□□ -0.17
ECM1P39715 DEP1YAL013W 1218 nt13.8□□□□□ -0.2
ECM1P39715 SHR5YOL110W 714 nt13.79□□□□□ -0.2
ECM1P39715 NVJ2YPR091C 2313 nt13.78□□□□□ -0.2
ECM1P39715 MEP2YNL142W 1500 nt13.77□□□□□ -0.21
ECM1P39715 YOL085CYOL085C 342 nt13.68□□□□□ -0.22
ECM1P39715 PTC2YER089C 1395 nt13.68□□□□□ -0.22
ECM1P39715 RPP1BYDL130W 321 nt13.62□□□□□ -0.23
ECM1P39715 PUN1YLR414C 792 nt13.6□□□□□ -0.23
ECM1P39715 DCW1YKL046C 1350 nt13.59□□□□□ -0.23
ECM1P39715 NAB2YGL122C 1578 nt13.59□□□□□ -0.23
ECM1P39715 RPN10YHR200W 807 nt13.51□□□□□ -0.25
ECM1P39715 PKP1YIL042C 1185 nt13.51□□□□□ -0.25
ECM1P39715 tP(UGG)O3tP(UGG)O3 72 nt13.5□□□□□ -0.25
ECM1P39715 YBR220CYBR220C 1683 nt13.47□□□□□ -0.25
ECM1P39715 FIS1YIL065C 468 nt13.44□□□□□ -0.26
ECM1P39715 YNL208WYNL208W 600 nt13.4□□□□□ -0.26
ECM1P39715 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
ECM1P39715 EMI2YDR516C 1503 nt13.31□□□□□ -0.28
ECM1P39715 YPS1YLR120C 1710 nt13.27□□□□□ -0.28
ECM1P39715 DAL1YIR027C 1383 nt13.24□□□□□ -0.29
ECM1P39715 PCH2YBR186W 1695 nt13.21□□□□□ -0.29
ECM1P39715 GUT2YIL155C 1950 nt13.21□□□□□ -0.29
ECM1P39715 PET122YER153C 765 nt13.2□□□□□ -0.3
ECM1P39715 FPR4YLR449W 1179 nt13.18□□□□□ -0.3
ECM1P39715 SDH1YKL148C 1923 nt13.17□□□□□ -0.3
ECM1P39715 PHO4YFR034C 939 nt13.17□□□□□ -0.3
ECM1P39715 YHR165W-AYHR165W-A 312 nt13.16□□□□□ -0.3
ECM1P39715 YMR090WYMR090W 684 nt13.16□□□□□ -0.3
ECM1P39715 FPS1YLL043W 2010 nt13.14□□□□□ -0.31
ECM1P39715 YDL221WYDL221W 552 nt13.13□□□□□ -0.31
ECM1P39715 YJR120WYJR120W 351 nt13.08□□□□□ -0.32
ECM1P39715 PIB2YGL023C 1908 nt13.06□□□□□ -0.32
ECM1P39715 YDR095CYDR095C 411 nt13.04□□□□□ -0.32
ECM1P39715 YDJ1YNL064C 1230 nt13.04□□□□□ -0.32
ECM1P39715 SEC11YIR022W 504 nt13.02□□□□□ -0.33
ECM1P39715 CAC2YML102W 1407 nt13.01□□□□□ -0.33
ECM1P39715 GAR1YHR089C 618 nt12.94□□□□□ -0.34
ECM1P39715 INM2YDR287W 879 nt12.93□□□□□ -0.34
ECM1P39715 SCC4YER147C 1875 nt12.92□□□□□ -0.34
ECM1P39715 PTP1YDL230W 1008 nt12.91□□□□□ -0.34
ECM1P39715 SCR1SCR1 522 nt12.89□□□□□ -0.35
ECM1P39715 UME6YDR207C 2511 nt12.84□□□□□ -0.35
ECM1P39715 IRC15YPL017C 1500 nt12.83□□□□□ -0.36
ECM1P39715 YSC84YHR016C 1407 nt12.79□□□□□ -0.36
ECM1P39715 RTF1YGL244W 1677 nt12.77□□□□□ -0.36
ECM1P39715 GIS3YLR094C 1509 nt12.74□□□□□ -0.37
ECM1P39715 RPP2AYOL039W 321 nt12.74□□□□□ -0.37
ECM1P39715 YHL050CYHL050C 2094 nt12.72□□□□□ -0.37
ECM1P39715 YBL100CYBL100C 315 nt12.71□□□□□ -0.37
ECM1P39715 RPP2BYDR382W 333 nt12.7□□□□□ -0.38
ECM1P39715 SSA1YAL005C 1929 nt12.68□□□□□ -0.38
ECM1P39715 RRN5YLR141W 1092 nt12.66□□□□□ -0.38
ECM1P39715 PTK1YKL198C 1989 nt12.66□□□□□ -0.38
ECM1P39715 ATS1YAL020C 1002 nt12.62□□□□□ -0.39
ECM1P39715 BOR1YNL275W 1731 nt12.59□□□□□ -0.39
ECM1P39715 BOP3YNL042W 1191 nt12.56□□□□□ -0.4
ECM1P39715 TIR1YER011W 765 nt12.55□□□□□ -0.4
ECM1P39715 FUN26YAL022C 1554 nt12.53□□□□□ -0.4
ECM1P39715 RRT12YCR045C 1476 nt12.53□□□□□ -0.4
ECM1P39715 ALF1YNL148C 765 nt12.5□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms