RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C TY1A-ML2P0CX76 440 aa1.56□□□□□ -2.16
UBP3YER151C ECM2P38241 364 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C TY1A-GR1Q12085 440 aa1.56□□□□□ -2.16
UBP3YER151C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C TY1A-OLQ92392 440 aaKnown RBP1.56□□□□□ -2.16
UBP3YER151C CTS1P29029 562 aa1.55□□□□□ -2.16
UBP3YER151C SPT20P50875 604 aa1.55□□□□□ -2.16
UBP3YER151C PUS7Q08647 676 aaKnown RBP1.55□□□□□ -2.16
UBP3YER151C DUR1,2P32528 1835 aaKnown RBP1.55□□□□□ -2.16
UBP3YER151C FLP1P03870 423 aa1.55□□□□□ -2.16
UBP3YER151C TRM2P33753 639 aa1.55□□□□□ -2.16
UBP3YER151C EXO5P38289 585 aa1.55□□□□□ -2.16
UBP3YER151C GLO3P38682 493 aaKnown RBP1.55□□□□□ -2.16
UBP3YER151C NUT1P53114 1132 aa1.55□□□□□ -2.16
UBP3YER151C YAF9P53930 226 aa1.55□□□□□ -2.16
UBP3YER151C KAR5Q04746 504 aa1.55□□□□□ -2.16
UBP3YER151C WHI4Q07655 649 aaKnown RBP1.55□□□□□ -2.16
UBP3YER151C AVO1Q08236 1176 aa1.55□□□□□ -2.16
UBP3YER151C PSF3Q12146 194 aa1.55□□□□□ -2.16
UBP3YER151C HAT1Q12341 374 aa1.55□□□□□ -2.16
UBP3YER151C WHI5Q12416 295 aa1.55□□□□□ -2.16
UBP3YER151C GEF1P37020 779 aa1.54□□□□□ -2.16
UBP3YER151C NCS6P53088 359 aa1.54□□□□□ -2.16
UBP3YER151C ELA1P53861 379 aaPredicted RBP1.54□□□□□ -2.16
UBP3YER151C ZDS2P54786 942 aa1.54□□□□□ -2.16
UBP3YER151C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16 RIP-Chip
UBP3YER151C TAT2P38967 592 aa1.54□□□□□ -2.16
UBP3YER151C UFD2P54860 961 aa1.54□□□□□ -2.16
UBP3YER151C NOG1Q02892 647 aaKnown RBP1.54□□□□□ -2.16
UBP3YER151C NUT2Q06213 157 aa1.54□□□□□ -2.16
UBP3YER151C YBL113CQ7M4S9 792 aa1.54□□□□□ -2.16
UBP3YER151C AUS1Q08409 1394 aa1.54□□□□□ -2.16
UBP3YER151C FUR4P05316 633 aaKnown RBP1.53□□□□□ -2.16
UBP3YER151C UGA4P32837 571 aa1.53□□□□□ -2.16
UBP3YER151C PRP40P33203 583 aaKnown RBP1.53□□□□□ -2.16
UBP3YER151C DOM34P33309 386 aa1.53□□□□□ -2.16
UBP3YER151C GRS1P38088 690 aaKnown RBP1.53□□□□□ -2.16
UBP3YER151C MSE1P48525 536 aa1.53□□□□□ -2.16
UBP3YER151C YNL011CP53980 444 aa1.53□□□□□ -2.16
UBP3YER151C DUS4Q06063 367 aa1.53□□□□□ -2.16
UBP3YER151C PUS9Q12069 462 aa1.53□□□□□ -2.16
UBP3YER151C SRO9P25567 434 aaKnown RBP1.53□□□□□ -2.16
UBP3YER151C MET4P32389 672 aa1.53□□□□□ -2.16
UBP3YER151C MDL2P33311 773 aa1.53□□□□□ -2.16
UBP3YER151C NEM1P38757 446 aa1.53□□□□□ -2.16
UBP3YER151C SLS1P42900 643 aa1.53□□□□□ -2.16
UBP3YER151C UBA2P52488 636 aa1.53□□□□□ -2.16
UBP3YER151C ATG1P53104 897 aa1.53□□□□□ -2.16
UBP3YER151C SEN54Q02825 467 aaPredicted RBP1.53□□□□□ -2.16
UBP3YER151C PMT7Q06644 662 aa1.53□□□□□ -2.16
UBP3YER151C ECM30Q06673 1274 aa1.53□□□□□ -2.16
UBP3YER151C DAL5P15365 543 aa1.53□□□□□ -2.17
UBP3YER151C RET1P22276 1149 aaKnown RBP1.53□□□□□ -2.17
UBP3YER151C MEF2P39677 819 aa1.53□□□□□ -2.17
UBP3YER151C RVS167P39743 482 aaKnown RBP1.53□□□□□ -2.17
UBP3YER151C YER158CP40095 573 aa1.53□□□□□ -2.17
UBP3YER151C RRT6P53117 311 aaPredicted RBP1.53□□□□□ -2.17
UBP3YER151C YNR029CP53729 429 aaKnown RBP1.53□□□□□ -2.17
UBP3YER151C RPL34AP87262 121 aaPredicted RBP1.53□□□□□ -2.17
UBP3YER151C CDC55Q00362 526 aa1.53□□□□□ -2.17
UBP3YER151C YML020WQ03722 664 aa1.53□□□□□ -2.17
UBP3YER151C EAF1Q06337 982 aa1.53□□□□□ -2.17
UBP3YER151C GRX6Q12438 231 aa1.53□□□□□ -2.17
UBP3YER151C HEM1P09950 548 aaPredicted RBP1.52□□□□□ -2.17
UBP3YER151C CDC3P32457 520 aaKnown RBP1.52□□□□□ -2.17
UBP3YER151C BUD2P33314 1104 aa1.52□□□□□ -2.17
UBP3YER151C BAP2P38084 609 aa1.52□□□□□ -2.17
UBP3YER151C ATG14P38270 344 aa1.52□□□□□ -2.17
UBP3YER151C SSF1P38789 453 aaPredicted RBP1.52□□□□□ -2.17
UBP3YER151C ACF4P47129 309 aa1.52□□□□□ -2.17
UBP3YER151C ENV11P53246 860 aa1.52□□□□□ -2.17
UBP3YER151C TPP1Q03796 238 aa1.52□□□□□ -2.17
UBP3YER151C TRS120Q04183 1289 aa1.52□□□□□ -2.17
UBP3YER151C HEM13P11353 328 aaKnown RBP1.52□□□□□ -2.17
UBP3YER151C YHL050CP38721 697 aa1.52□□□□□ -2.17
UBP3YER151C YHR219WP38900 624 aa1.52□□□□□ -2.17
UBP3YER151C YJL045WP47052 634 aa1.52□□□□□ -2.17
UBP3YER151C UTP5Q04177 643 aaKnown RBP1.52□□□□□ -2.17
UBP3YER151C BSC2Q05611 235 aa1.52□□□□□ -2.17
UBP3YER151C CDC6P09119 513 aa1.51□□□□□ -2.17
UBP3YER151C GRX1P25373 110 aaKnown RBP1.51□□□□□ -2.17
UBP3YER151C RDH54P38086 958 aa1.51□□□□□ -2.17
UBP3YER151C BRN1P38170 754 aa1.51□□□□□ -2.17
UBP3YER151C PFF1P38244 976 aa1.51□□□□□ -2.17
UBP3YER151C YHL012WP38709 493 aa1.51□□□□□ -2.17
UBP3YER151C CHS7P38843 316 aa1.51□□□□□ -2.17
UBP3YER151C LAM1P38851 1228 aa1.51□□□□□ -2.17
UBP3YER151C GCN5Q03330 439 aa1.51□□□□□ -2.17
UBP3YER151C RSA3Q05942 220 aaKnown RBP1.51□□□□□ -2.17
UBP3YER151C YLR257WQ06146 321 aaKnown RBP1.51□□□□□ -2.17
UBP3YER151C RSC58Q07979 502 aa1.51□□□□□ -2.17
UBP3YER151C ATE1P16639 503 aa1.51□□□□□ -2.17
UBP3YER151C SHC1P39000 512 aa1.51□□□□□ -2.17
UBP3YER151C FAA3P39002 694 aa1.51□□□□□ -2.17
UBP3YER151C YAR028WP39548 234 aa1.51□□□□□ -2.17
UBP3YER151C RRT14P40470 206 aa1.51□□□□□ -2.17
UBP3YER151C SSM4P40318 1319 aa1.5□□□□□ -2.17
UBP3YER151C PHO4P07270 312 aaKnown RBP1.5□□□□□ -2.17
UBP3YER151C MCM5P29496 775 aaKnown RBP1.5□□□□□ -2.17
UBP3YER151C AIM26P32858 118 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms