Protein–RNA interactions for Protein: P38241

ECM2, Pre-mRNA-splicing factor SLT11, yeastyeast

Known RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM2P38241 NSR1YGR159C 1245 nt21.12■□□□□ 0.97
ECM2P38241 YML009W-BYML009W-B 477 nt20.94■□□□□ 0.94
ECM2P38241 NOP1YDL014W 984 nt20.25■□□□□ 0.83
ECM2P38241 MDJ1YFL016C 1536 nt19.07■□□□□ 0.64
ECM2P38241 YKL036CYKL036C 393 nt18.62■□□□□ 0.57
ECM2P38241 SRX1YKL086W 384 nt17.68■□□□□ 0.42
ECM2P38241 Q0297Q0297 156 nt17.66■□□□□ 0.42
ECM2P38241 YJL027CYJL027C 417 nt17.55■□□□□ 0.4
ECM2P38241 SCS3YGL126W 1143 nt16.88■□□□□ 0.29
ECM2P38241 YCR051WYCR051W 669 nt16.81■□□□□ 0.28
ECM2P38241 DBP2YNL112W 1641 nt16.77■□□□□ 0.27
ECM2P38241 YBR190WYBR190W 312 nt16.35■□□□□ 0.21
ECM2P38241 TRN1tP(UGG)A 72 nt16.21■□□□□ 0.19
ECM2P38241 SUF9tP(UGG)F 72 nt16.21■□□□□ 0.19
ECM2P38241 SUF8tP(UGG)H 72 nt16.21■□□□□ 0.19
ECM2P38241 tP(UGG)LtP(UGG)L 72 nt16.21■□□□□ 0.19
ECM2P38241 SUF7tP(UGG)M 72 nt16.21■□□□□ 0.19
ECM2P38241 tP(UGG)N1tP(UGG)N1 72 nt16.21■□□□□ 0.19
ECM2P38241 tP(UGG)N2tP(UGG)N2 72 nt16.21■□□□□ 0.19
ECM2P38241 tP(UGG)O1tP(UGG)O1 72 nt16.21■□□□□ 0.19
ECM2P38241 SUF11tP(UGG)O2 72 nt16.21■□□□□ 0.19
ECM2P38241 YOL085CYOL085C 342 nt16.11■□□□□ 0.17
ECM2P38241 CCC1YLR220W 969 nt16■□□□□ 0.15
ECM2P38241 RTC3YHR087W 336 nt15.93■□□□□ 0.14
ECM2P38241 PKP1YIL042C 1185 nt15.91■□□□□ 0.14
ECM2P38241 RPP1BYDL130W 321 nt15.87■□□□□ 0.13
ECM2P38241 RVS167YDR388W 1449 nt15.63■□□□□ 0.09
ECM2P38241 SCJ1YMR214W 1134 nt15.55■□□□□ 0.08
ECM2P38241 tP(UGG)O3tP(UGG)O3 72 nt15.2■□□□□ 0.02
ECM2P38241 PET122YER153C 765 nt15.17■□□□□ 0.02
ECM2P38241 PUT4YOR348C 1884 nt15.12■□□□□ 0.01
ECM2P38241 ATS1YAL020C 1002 nt15.08■□□□□ 0
ECM2P38241 SHR5YOL110W 714 nt15.04■□□□□ -0
ECM2P38241 SCR1SCR1 522 nt15.03■□□□□ -0
ECM2P38241 SSA3YBL075C 1950 nt14.9□□□□□ -0.02
ECM2P38241 URN1YPR152C 1398 nt14.82□□□□□ -0.04
ECM2P38241 ARE1YCR048W 1833 nt14.74□□□□□ -0.05
ECM2P38241 RRN5YLR141W 1092 nt14.74□□□□□ -0.05
ECM2P38241 YDJ1YNL064C 1230 nt14.72□□□□□ -0.05
ECM2P38241 DEP1YAL013W 1218 nt14.71□□□□□ -0.05
ECM2P38241 OPI9YLR338W 858 nt14.68□□□□□ -0.06
ECM2P38241 SAH1YER043C 1350 nt14.68□□□□□ -0.06
ECM2P38241 POA1YBR022W 534 nt14.6□□□□□ -0.07
ECM2P38241 YHR049C-AYHR049C-A 297 nt14.54□□□□□ -0.08
ECM2P38241 RPN10YHR200W 807 nt14.5□□□□□ -0.09
ECM2P38241 YNL208WYNL208W 600 nt14.45□□□□□ -0.1
ECM2P38241 RSB1YOR049C 1065 nt14.44□□□□□ -0.1
ECM2P38241 YER088W-BYER088W-B 147 nt14.43□□□□□ -0.1
ECM2P38241 GAR1YHR089C 618 nt14.42□□□□□ -0.1
ECM2P38241 BSC6YOL137W 1494 nt14.36□□□□□ -0.11
ECM2P38241 PUN1YLR414C 792 nt14.24□□□□□ -0.13
ECM2P38241 Q0182Q0182 405 nt14.19□□□□□ -0.14
ECM2P38241 BUD23YCR047C 828 nt14.15□□□□□ -0.14
ECM2P38241 PTC2YER089C 1395 nt14.12□□□□□ -0.15
ECM2P38241 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
ECM2P38241 NAB2YGL122C 1578 nt13.98□□□□□ -0.17
ECM2P38241 SPT5YML010W 3192 nt13.97□□□□□ -0.17
ECM2P38241 PST2YDR032C 597 nt13.97□□□□□ -0.17
ECM2P38241 TIR1YER011W 765 nt13.97□□□□□ -0.17
ECM2P38241 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
ECM2P38241 SSA1YAL005C 1929 nt13.88□□□□□ -0.19
ECM2P38241 MOT3YMR070W 1473 nt13.81□□□□□ -0.2
ECM2P38241 FIS1YIL065C 468 nt13.79□□□□□ -0.2
ECM2P38241 DAL1YIR027C 1383 nt13.74□□□□□ -0.21
ECM2P38241 RPP2BYDR382W 333 nt13.71□□□□□ -0.21
ECM2P38241 FPR4YLR449W 1179 nt13.67□□□□□ -0.22
ECM2P38241 INM2YDR287W 879 nt13.65□□□□□ -0.22
ECM2P38241 SRB2YHR041C 633 nt13.63□□□□□ -0.23
ECM2P38241 PHO4YFR034C 939 nt13.62□□□□□ -0.23
ECM2P38241 SSA4YER103W 1929 nt13.59□□□□□ -0.23
ECM2P38241 MEP2YNL142W 1500 nt13.51□□□□□ -0.25
ECM2P38241 YPS1YLR120C 1710 nt13.48□□□□□ -0.25
ECM2P38241 YBL100CYBL100C 315 nt13.46□□□□□ -0.25
ECM2P38241 SHU1YHL006C 453 nt13.43□□□□□ -0.26
ECM2P38241 YKL097CYKL097C 411 nt13.42□□□□□ -0.26
ECM2P38241 BDH2YAL061W 1254 nt13.41□□□□□ -0.26
ECM2P38241 YDR095CYDR095C 411 nt13.35□□□□□ -0.27
ECM2P38241 YHR165W-AYHR165W-A 312 nt13.33□□□□□ -0.28
ECM2P38241 DCW1YKL046C 1350 nt13.31□□□□□ -0.28
ECM2P38241 FUN26YAL022C 1554 nt13.3□□□□□ -0.28
ECM2P38241 WWM1YFL010C 636 nt13.3□□□□□ -0.28
ECM2P38241 YAL037C-BYAL037C-B 975 nt13.28□□□□□ -0.28
ECM2P38241 TRM9YML014W 840 nt13.19□□□□□ -0.3
ECM2P38241 LSM3YLR438C-A 270 nt13.18□□□□□ -0.3
ECM2P38241 ALF1YNL148C 765 nt13.15□□□□□ -0.3
ECM2P38241 YGR021WYGR021W 873 nt13.14□□□□□ -0.31
ECM2P38241 EMI2YDR516C 1503 nt13.12□□□□□ -0.31
ECM2P38241 BDF1YLR399C 2061 nt13.11□□□□□ -0.31
ECM2P38241 CCT6YDR188W 1641 nt13.11□□□□□ -0.31
ECM2P38241 PTP1YDL230W 1008 nt13.11□□□□□ -0.31
ECM2P38241 YFL021C-AYFL021C-A 855 nt13.09□□□□□ -0.31
ECM2P38241 RPP2AYOL039W 321 nt13.09□□□□□ -0.31
ECM2P38241 HOM6YJR139C 1080 nt13.07□□□□□ -0.32
ECM2P38241 CAC2YML102W 1407 nt13.05□□□□□ -0.32
ECM2P38241 MNP1YGL068W 585 nt13.01□□□□□ -0.33
ECM2P38241 YMR090WYMR090W 684 nt13.01□□□□□ -0.33
ECM2P38241 SIS1YNL007C 1059 nt13.01□□□□□ -0.33
ECM2P38241 YDL221WYDL221W 552 nt13□□□□□ -0.33
ECM2P38241 YBR220CYBR220C 1683 nt12.99□□□□□ -0.33
ECM2P38241 SUF2tP(AGG)C 72 nt12.99□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms