Protein–RNA interactions for Protein: P32837

UGA4, GABA-specific permease, yeastyeast

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UGA4P32837 YML009W-BYML009W-B 477 nt23.19■■□□□ 1.3
UGA4P32837 NSR1YGR159C 1245 nt22.78■■□□□ 1.24
UGA4P32837 NOP1YDL014W 984 nt22.55■■□□□ 1.2
UGA4P32837 YKL036CYKL036C 393 nt21.04■□□□□ 0.96
UGA4P32837 MDJ1YFL016C 1536 nt20.12■□□□□ 0.81
UGA4P32837 Q0297Q0297 156 nt19.8■□□□□ 0.76
UGA4P32837 YJL027CYJL027C 417 nt19.72■□□□□ 0.75
UGA4P32837 SRX1YKL086W 384 nt19.72■□□□□ 0.75
UGA4P32837 SCS3YGL126W 1143 nt19.28■□□□□ 0.68
UGA4P32837 YCR051WYCR051W 669 nt18.8■□□□□ 0.6
UGA4P32837 YOL085CYOL085C 342 nt18.24■□□□□ 0.51
UGA4P32837 PKP1YIL042C 1185 nt18.01■□□□□ 0.47
UGA4P32837 DBP2YNL112W 1641 nt17.84■□□□□ 0.45
UGA4P32837 RPP1BYDL130W 321 nt17.8■□□□□ 0.44
UGA4P32837 TRN1tP(UGG)A 72 nt17.71■□□□□ 0.43
UGA4P32837 SUF9tP(UGG)F 72 nt17.71■□□□□ 0.43
UGA4P32837 SUF8tP(UGG)H 72 nt17.71■□□□□ 0.43
UGA4P32837 tP(UGG)LtP(UGG)L 72 nt17.71■□□□□ 0.43
UGA4P32837 SUF7tP(UGG)M 72 nt17.71■□□□□ 0.43
UGA4P32837 tP(UGG)N1tP(UGG)N1 72 nt17.71■□□□□ 0.43
UGA4P32837 tP(UGG)N2tP(UGG)N2 72 nt17.71■□□□□ 0.43
UGA4P32837 tP(UGG)O1tP(UGG)O1 72 nt17.71■□□□□ 0.43
UGA4P32837 SUF11tP(UGG)O2 72 nt17.71■□□□□ 0.43
UGA4P32837 CCC1YLR220W 969 nt17.63■□□□□ 0.41
UGA4P32837 ATS1YAL020C 1002 nt17.29■□□□□ 0.36
UGA4P32837 SCJ1YMR214W 1134 nt17.24■□□□□ 0.35
UGA4P32837 PET122YER153C 765 nt17.03■□□□□ 0.32
UGA4P32837 YBR190WYBR190W 312 nt17.01■□□□□ 0.31
UGA4P32837 tP(UGG)O3tP(UGG)O3 72 nt16.85■□□□□ 0.29
UGA4P32837 SCR1SCR1 522 nt16.85■□□□□ 0.29
UGA4P32837 RVS167YDR388W 1449 nt16.79■□□□□ 0.28
UGA4P32837 RTC3YHR087W 336 nt16.73■□□□□ 0.27
UGA4P32837 RRN5YLR141W 1092 nt16.56■□□□□ 0.24
UGA4P32837 RSB1YOR049C 1065 nt16.29■□□□□ 0.2
UGA4P32837 SHR5YOL110W 714 nt16.26■□□□□ 0.19
UGA4P32837 YDJ1YNL064C 1230 nt16.25■□□□□ 0.19
UGA4P32837 YER088W-BYER088W-B 147 nt16.22■□□□□ 0.19
UGA4P32837 PST2YDR032C 597 nt15.97■□□□□ 0.15
UGA4P32837 GAR1YHR089C 618 nt15.94■□□□□ 0.14
UGA4P32837 DEP1YAL013W 1218 nt15.84■□□□□ 0.13
UGA4P32837 URN1YPR152C 1398 nt15.72■□□□□ 0.11
UGA4P32837 YNL208WYNL208W 600 nt15.52■□□□□ 0.08
UGA4P32837 RPN10YHR200W 807 nt15.48■□□□□ 0.07
UGA4P32837 YKL097CYKL097C 411 nt15.46■□□□□ 0.07
UGA4P32837 OPI9YLR338W 858 nt15.41■□□□□ 0.06
UGA4P32837 TIR1YER011W 765 nt15.36■□□□□ 0.05
UGA4P32837 SHU1YHL006C 453 nt15.31■□□□□ 0.04
UGA4P32837 SAH1YER043C 1350 nt15.31■□□□□ 0.04
UGA4P32837 PUT4YOR348C 1884 nt15.3■□□□□ 0.04
UGA4P32837 SSA1YAL005C 1929 nt15.15■□□□□ 0.02
UGA4P32837 ARE1YCR048W 1833 nt15.1■□□□□ 0.01
UGA4P32837 YAL037C-BYAL037C-B 975 nt15.07■□□□□ 0
UGA4P32837 YJR018WYJR018W 363 nt15□□□□□ -0.01
UGA4P32837 SRB2YHR041C 633 nt14.99□□□□□ -0.01
UGA4P32837 PUN1YLR414C 792 nt14.95□□□□□ -0.02
UGA4P32837 YHR049C-AYHR049C-A 297 nt14.94□□□□□ -0.02
UGA4P32837 POA1YBR022W 534 nt14.89□□□□□ -0.03
UGA4P32837 YJR120WYJR120W 351 nt14.83□□□□□ -0.04
UGA4P32837 YOR139CYOR139C 393 nt14.82□□□□□ -0.04
UGA4P32837 PTC2YER089C 1395 nt14.78□□□□□ -0.04
UGA4P32837 WWM1YFL010C 636 nt14.76□□□□□ -0.05
UGA4P32837 RPP2BYDR382W 333 nt14.73□□□□□ -0.05
UGA4P32837 MNP1YGL068W 585 nt14.68□□□□□ -0.06
UGA4P32837 BUD23YCR047C 828 nt14.65□□□□□ -0.06
UGA4P32837 YGR021WYGR021W 873 nt14.65□□□□□ -0.06
UGA4P32837 HOM6YJR139C 1080 nt14.65□□□□□ -0.06
UGA4P32837 NPL3YDR432W 1245 nt14.64□□□□□ -0.07
UGA4P32837 NAB2YGL122C 1578 nt14.51□□□□□ -0.09
UGA4P32837 BSC6YOL137W 1494 nt14.5□□□□□ -0.09
UGA4P32837 BDH2YAL061W 1254 nt14.47□□□□□ -0.09
UGA4P32837 YFL021C-AYFL021C-A 855 nt14.44□□□□□ -0.1
UGA4P32837 RKM5YLR137W 1104 nt14.44□□□□□ -0.1
UGA4P32837 FPR4YLR449W 1179 nt14.43□□□□□ -0.1
UGA4P32837 SSA3YBL075C 1950 nt14.42□□□□□ -0.1
UGA4P32837 YOL037CYOL037C 354 nt14.42□□□□□ -0.1
UGA4P32837 INM2YDR287W 879 nt14.39□□□□□ -0.11
UGA4P32837 DAL1YIR027C 1383 nt14.38□□□□□ -0.11
UGA4P32837 FIS1YIL065C 468 nt14.35□□□□□ -0.11
UGA4P32837 YBL100CYBL100C 315 nt14.33□□□□□ -0.12
UGA4P32837 LSM3YLR438C-A 270 nt14.29□□□□□ -0.12
UGA4P32837 Q0182Q0182 405 nt14.28□□□□□ -0.12
UGA4P32837 PHO4YFR034C 939 nt14.25□□□□□ -0.13
UGA4P32837 tM(CAU)CtM(CAU)C 72 nt14.23□□□□□ -0.13
UGA4P32837 IMT4tM(CAU)E 72 nt14.23□□□□□ -0.13
UGA4P32837 IMT3tM(CAU)J3 72 nt14.23□□□□□ -0.13
UGA4P32837 IMT1tM(CAU)O1 72 nt14.23□□□□□ -0.13
UGA4P32837 IMT2tM(CAU)P 72 nt14.23□□□□□ -0.13
UGA4P32837 TRM9YML014W 840 nt14.18□□□□□ -0.14
UGA4P32837 FUN26YAL022C 1554 nt14.17□□□□□ -0.14
UGA4P32837 MOT3YMR070W 1473 nt14.12□□□□□ -0.15
UGA4P32837 YLR281CYLR281C 468 nt14.09□□□□□ -0.15
UGA4P32837 PUS2YGL063W 1113 nt14.08□□□□□ -0.16
UGA4P32837 WHI5YOR083W 888 nt14.05□□□□□ -0.16
UGA4P32837 CCT6YDR188W 1641 nt13.98□□□□□ -0.17
UGA4P32837 ALF1YNL148C 765 nt13.93□□□□□ -0.18
UGA4P32837 YPS1YLR120C 1710 nt13.88□□□□□ -0.19
UGA4P32837 YLR154C-GYLR154C-G 150 nt13.86□□□□□ -0.19
UGA4P32837 SUF2tP(AGG)C 72 nt13.85□□□□□ -0.19
UGA4P32837 SUF10tP(AGG)N 72 nt13.85□□□□□ -0.19
UGA4P32837 YDR095CYDR095C 411 nt13.83□□□□□ -0.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms