RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C FAP1P53971 965 aa5.73□□□□□ -1.49
UBP3YER151C PRY3P47033 881 aa5.35□□□□□ -1.55
UBP3YER151C MTC1P47018 478 aaKnown RBP5.31□□□□□ -1.56
UBP3YER151C AAD16Q02895 342 aa4.96□□□□□ -1.62
UBP3YER151C HAA1Q12753 694 aaKnown RBP4.94□□□□□ -1.62
UBP3YER151C PRI1P10363 409 aa4.8□□□□□ -1.64
UBP3YER151C YCK3P39962 524 aa4.67□□□□□ -1.66
UBP3YER151C ISW2Q08773 1120 aa4.66□□□□□ -1.66
UBP3YER151C TSR3Q12094 313 aaKnown RBP4.6□□□□□ -1.67
UBP3YER151C RPG1P38249 964 aaKnown RBP4.59□□□□□ -1.68
UBP3YER151C MRPL32P25348 183 aa4.52□□□□□ -1.69
UBP3YER151C YGL015CP33199 130 aa4.46□□□□□ -1.7
UBP3YER151C DRS1P32892 752 aaKnown RBP4.42□□□□□ -1.7
UBP3YER151C BUD31P25337 157 aaPredicted RBP4.26□□□□□ -1.73
UBP3YER151C SIS1P25294 352 aaKnown RBP4.19□□□□□ -1.74
UBP3YER151C REB1P21538 810 aa4.19□□□□□ -1.74
UBP3YER151C RSE1Q04693 1361 aaKnown RBP4.16□□□□□ -1.74
UBP3YER151C RPL17AP05740 184 aaKnown RBP4.08□□□□□ -1.76
UBP3YER151C UBP9P39967 754 aa4.08□□□□□ -1.76
UBP3YER151C RPL17BP46990 184 aaKnown RBP4.08□□□□□ -1.76
UBP3YER151C DIP2Q12220 943 aaPredicted RBP4.06□□□□□ -1.76
UBP3YER151C UBP10P53874 792 aaPredicted RBP4.01□□□□□ -1.77
UBP3YER151C MAP2P38174 421 aaKnown RBP3.99□□□□□ -1.77
UBP3YER151C CDC27P38042 758 aa3.98□□□□□ -1.77
UBP3YER151C TIF4632P39936 914 aaKnown RBP3.98□□□□□ -1.77
UBP3YER151C SLX5P32828 619 aaKnown RBP3.86□□□□□ -1.79
UBP3YER151C SCY1P53009 804 aa3.85□□□□□ -1.79
UBP3YER151C TGL3P40308 642 aa3.85□□□□□ -1.79
UBP3YER151C HOP09932 586 aa3.82□□□□□ -1.8
UBP3YER151C DCD1P06773 312 aa3.79□□□□□ -1.8
UBP3YER151C YKR023WP36119 530 aaKnown RBP3.78□□□□□ -1.8
UBP3YER151C YJL171CP46992 396 aa3.74□□□□□ -1.81
UBP3YER151C TFC8Q12308 588 aa3.74□□□□□ -1.81
UBP3YER151C YBL029C-AQ3E756 94 aa3.67□□□□□ -1.82
UBP3YER151C SPP1Q03012 353 aa3.64□□□□□ -1.83
UBP3YER151C YOR238WQ08634 303 aa3.64□□□□□ -1.83
UBP3YER151C SPT21P35209 758 aa3.63□□□□□ -1.83
UBP3YER151C WSC3Q12215 556 aa3.63□□□□□ -1.83
UBP3YER151C BCH2P36122 765 aa3.6□□□□□ -1.83
UBP3YER151C AVT3P36062 692 aa3.59□□□□□ -1.83
UBP3YER151C GTT3P39996 337 aa3.58□□□□□ -1.84
UBP3YER151C VNX1P42839 908 aa3.57□□□□□ -1.84
UBP3YER151C BMT6Q12291 365 aa3.53□□□□□ -1.84
UBP3YER151C TIF11P38912 153 aaKnown RBP3.51□□□□□ -1.85
UBP3YER151C EPS1P40557 701 aa3.5□□□□□ -1.85
UBP3YER151C YAP5P40574 245 aa3.5□□□□□ -1.85
UBP3YER151C AIR2Q12476 344 aaKnown RBP3.5□□□□□ -1.85
UBP3YER151C MST1P07236 462 aa3.49□□□□□ -1.85
UBP3YER151C BDF1P35817 686 aa3.48□□□□□ -1.85
UBP3YER151C YIL055CP40523 627 aaKnown RBP3.48□□□□□ -1.85
UBP3YER151C PTP3P40048 928 aa3.47□□□□□ -1.85
UBP3YER151C FKH1P40466 484 aa3.47□□□□□ -1.85
UBP3YER151C ULI1P43604 169 aa3.46□□□□□ -1.86
UBP3YER151C BBC1P47068 1157 aa3.45□□□□□ -1.86
UBP3YER151C LDB19Q12502 818 aa3.45□□□□□ -1.86
UBP3YER151C RGA2Q06407 1009 aa3.43□□□□□ -1.86
UBP3YER151C RIM101P33400 625 aa3.42□□□□□ -1.86
UBP3YER151C TFG1P41895 735 aaPredicted RBP3.42□□□□□ -1.86
UBP3YER151C BFR2Q06631 534 aaKnown RBP3.41□□□□□ -1.86
UBP3YER151C NSR1P27476 414 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
UBP3YER151C EAP1P36041 632 aaKnown RBP3.37□□□□□ -1.87
UBP3YER151C NCR1Q12200 1170 aa3.37□□□□□ -1.87
UBP3YER151C PIB1Q06651 286 aa3.36□□□□□ -1.87
UBP3YER151C RTG1P32607 177 aa3.35□□□□□ -1.87
UBP3YER151C BCK2P33306 851 aa3.32□□□□□ -1.88
UBP3YER151C IOC2Q12072 812 aa3.32□□□□□ -1.88
UBP3YER151C AI2P03876 854 aa3.3□□□□□ -1.88
UBP3YER151C RSM7P47150 247 aa3.3□□□□□ -1.88
UBP3YER151C MSB4Q12317 492 aa3.3□□□□□ -1.88
UBP3YER151C SET4P42948 560 aa3.29□□□□□ -1.88
UBP3YER151C YAH1Q12184 172 aaKnown RBP3.29□□□□□ -1.88
UBP3YER151C YNL035CP53962 389 aaKnown RBP3.28□□□□□ -1.88
UBP3YER151C SAP30P38429 201 aa3.27□□□□□ -1.89
UBP3YER151C TRP5P00931 707 aaKnown RBP3.27□□□□□ -1.89
UBP3YER151C OXP1P28273 1286 aa3.27□□□□□ -1.89
UBP3YER151C SEC61P32915 480 aa3.26□□□□□ -1.89
UBP3YER151C CHL1P22516 861 aaPredicted RBP3.24□□□□□ -1.89
UBP3YER151C YOL036WQ08206 761 aa3.24□□□□□ -1.89
UBP3YER151C YDL129WQ07555 291 aa3.19□□□□□ -1.9
UBP3YER151C VRP1P37370 817 aa3.19□□□□□ -1.9
UBP3YER151C DPS1P04802 557 aaKnown RBP3.18□□□□□ -1.9
UBP3YER151C PRE3P38624 215 aa3.18□□□□□ -1.9
UBP3YER151C ELP4Q02884 456 aaKnown RBP3.18□□□□□ -1.9
UBP3YER151C MRM1P25270 412 aa3.18□□□□□ -1.9
UBP3YER151C JIP4Q03361 876 aa3.17□□□□□ -1.9
UBP3YER151C XDJ1P39102 459 aa3.16□□□□□ -1.9
UBP3YER151C YFR006WP43590 535 aa3.15□□□□□ -1.91
UBP3YER151C DBP1P24784 617 aaKnown RBP3.14□□□□□ -1.91
UBP3YER151C YMR1P47147 688 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
UBP3YER151C HTA1P04911 132 aaKnown RBP3.13□□□□□ -1.91
UBP3YER151C HTA2P04912 132 aa3.13□□□□□ -1.91
UBP3YER151C DCW1P36091 449 aa3.12□□□□□ -1.91
UBP3YER151C GYP5Q12344 894 aa3.12□□□□□ -1.91
UBP3YER151C ABP1P15891 592 aaKnown RBP3.12□□□□□ -1.91
UBP3YER151C VMA1P17255 1071 aaKnown RBP3.1□□□□□ -1.91
UBP3YER151C PEX29Q03370 554 aa3.08□□□□□ -1.92
UBP3YER151C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
UBP3YER151C PTC4P38089 393 aa3.07□□□□□ -1.92
UBP3YER151C RTG3P38165 486 aa3.06□□□□□ -1.92
UBP3YER151C SAM3Q08986 587 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms