Protein–RNA interactions for Protein: Q06673

ECM30, Protein ECM30, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM30Q06673 YML009W-BYML009W-B 477 nt22.63■■□□□ 1.21
ECM30Q06673 NOP1YDL014W 984 nt22.26■■□□□ 1.15
ECM30Q06673 NSR1YGR159C 1245 nt21.79■■□□□ 1.08
ECM30Q06673 YKL036CYKL036C 393 nt21.2■□□□□ 0.98
ECM30Q06673 YJL027CYJL027C 417 nt19.96■□□□□ 0.79
ECM30Q06673 Q0297Q0297 156 nt19.66■□□□□ 0.74
ECM30Q06673 SCS3YGL126W 1143 nt19.65■□□□□ 0.74
ECM30Q06673 SRX1YKL086W 384 nt19.42■□□□□ 0.7
ECM30Q06673 MDJ1YFL016C 1536 nt18.73■□□□□ 0.59
ECM30Q06673 YCR051WYCR051W 669 nt18.56■□□□□ 0.56
ECM30Q06673 YOL085CYOL085C 342 nt18.32■□□□□ 0.52
ECM30Q06673 SCJ1YMR214W 1134 nt18.25■□□□□ 0.51
ECM30Q06673 PKP1YIL042C 1185 nt18.01■□□□□ 0.47
ECM30Q06673 ATS1YAL020C 1002 nt17.76■□□□□ 0.43
ECM30Q06673 RPP1BYDL130W 321 nt17.67■□□□□ 0.42
ECM30Q06673 TRN1tP(UGG)A 72 nt17.13■□□□□ 0.33
ECM30Q06673 SUF9tP(UGG)F 72 nt17.13■□□□□ 0.33
ECM30Q06673 SUF8tP(UGG)H 72 nt17.13■□□□□ 0.33
ECM30Q06673 tP(UGG)LtP(UGG)L 72 nt17.13■□□□□ 0.33
ECM30Q06673 SUF7tP(UGG)M 72 nt17.13■□□□□ 0.33
ECM30Q06673 tP(UGG)N1tP(UGG)N1 72 nt17.13■□□□□ 0.33
ECM30Q06673 tP(UGG)N2tP(UGG)N2 72 nt17.13■□□□□ 0.33
ECM30Q06673 tP(UGG)O1tP(UGG)O1 72 nt17.13■□□□□ 0.33
ECM30Q06673 SUF11tP(UGG)O2 72 nt17.13■□□□□ 0.33
ECM30Q06673 CCC1YLR220W 969 nt17.06■□□□□ 0.32
ECM30Q06673 SCR1SCR1 522 nt16.88■□□□□ 0.29
ECM30Q06673 PET122YER153C 765 nt16.81■□□□□ 0.28
ECM30Q06673 DBP2YNL112W 1641 nt16.78■□□□□ 0.28
ECM30Q06673 RTC3YHR087W 336 nt16.67■□□□□ 0.26
ECM30Q06673 tP(UGG)O3tP(UGG)O3 72 nt16.46■□□□□ 0.23
ECM30Q06673 RRN5YLR141W 1092 nt16.41■□□□□ 0.22
ECM30Q06673 RSB1YOR049C 1065 nt16.33■□□□□ 0.2
ECM30Q06673 PST2YDR032C 597 nt16.3■□□□□ 0.2
ECM30Q06673 YKL097CYKL097C 411 nt16.1■□□□□ 0.17
ECM30Q06673 YER088W-BYER088W-B 147 nt16.08■□□□□ 0.16
ECM30Q06673 RVS167YDR388W 1449 nt16.05■□□□□ 0.16
ECM30Q06673 YDJ1YNL064C 1230 nt15.89■□□□□ 0.13
ECM30Q06673 YBR190WYBR190W 312 nt15.74■□□□□ 0.11
ECM30Q06673 SHR5YOL110W 714 nt15.61■□□□□ 0.09
ECM30Q06673 GAR1YHR089C 618 nt15.5■□□□□ 0.07
ECM30Q06673 SHU1YHL006C 453 nt15.49■□□□□ 0.07
ECM30Q06673 YOR139CYOR139C 393 nt15.27■□□□□ 0.04
ECM30Q06673 YAL037C-BYAL037C-B 975 nt15.09■□□□□ 0.01
ECM30Q06673 NPL3YDR432W 1245 nt15.06■□□□□ 0
ECM30Q06673 DEP1YAL013W 1218 nt14.99□□□□□ -0.01
ECM30Q06673 TIR1YER011W 765 nt14.91□□□□□ -0.02
ECM30Q06673 YNL208WYNL208W 600 nt14.79□□□□□ -0.04
ECM30Q06673 URN1YPR152C 1398 nt14.75□□□□□ -0.05
ECM30Q06673 RPN10YHR200W 807 nt14.73□□□□□ -0.05
ECM30Q06673 tM(CAU)CtM(CAU)C 72 nt14.62□□□□□ -0.07
ECM30Q06673 IMT4tM(CAU)E 72 nt14.62□□□□□ -0.07
ECM30Q06673 IMT3tM(CAU)J3 72 nt14.62□□□□□ -0.07
ECM30Q06673 IMT1tM(CAU)O1 72 nt14.62□□□□□ -0.07
ECM30Q06673 IMT2tM(CAU)P 72 nt14.62□□□□□ -0.07
ECM30Q06673 YOL037CYOL037C 354 nt14.58□□□□□ -0.08
ECM30Q06673 SSA1YAL005C 1929 nt14.56□□□□□ -0.08
ECM30Q06673 MNP1YGL068W 585 nt14.55□□□□□ -0.08
ECM30Q06673 YGR021WYGR021W 873 nt14.51□□□□□ -0.09
ECM30Q06673 HOM6YJR139C 1080 nt14.47□□□□□ -0.09
ECM30Q06673 BSC6YOL137W 1494 nt14.45□□□□□ -0.1
ECM30Q06673 SRB2YHR041C 633 nt14.43□□□□□ -0.1
ECM30Q06673 WWM1YFL010C 636 nt14.38□□□□□ -0.11
ECM30Q06673 MOT3YMR070W 1473 nt14.36□□□□□ -0.11
ECM30Q06673 OPI9YLR338W 858 nt14.35□□□□□ -0.11
ECM30Q06673 PUS2YGL063W 1113 nt14.31□□□□□ -0.12
ECM30Q06673 RKM5YLR137W 1104 nt14.27□□□□□ -0.13
ECM30Q06673 YLR281CYLR281C 468 nt14.15□□□□□ -0.14
ECM30Q06673 PUT4YOR348C 1884 nt14.14□□□□□ -0.15
ECM30Q06673 YFL021C-AYFL021C-A 855 nt14.13□□□□□ -0.15
ECM30Q06673 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
ECM30Q06673 SAH1YER043C 1350 nt14.1□□□□□ -0.15
ECM30Q06673 RPP2BYDR382W 333 nt14.06□□□□□ -0.16
ECM30Q06673 WHI5YOR083W 888 nt14.03□□□□□ -0.16
ECM30Q06673 MRPL8YJL063C 717 nt14.02□□□□□ -0.17
ECM30Q06673 YJR120WYJR120W 351 nt13.97□□□□□ -0.17
ECM30Q06673 PUN1YLR414C 792 nt13.97□□□□□ -0.17
ECM30Q06673 FMP45YDL222C 930 nt13.96□□□□□ -0.17
ECM30Q06673 SSA3YBL075C 1950 nt13.93□□□□□ -0.18
ECM30Q06673 BDH2YAL061W 1254 nt13.85□□□□□ -0.19
ECM30Q06673 YCH1YGR203W 447 nt13.84□□□□□ -0.19
ECM30Q06673 UBX6YJL048C 1191 nt13.84□□□□□ -0.19
ECM30Q06673 DSK2YMR276W 1122 nt13.82□□□□□ -0.2
ECM30Q06673 ADO1YJR105W 1023 nt13.81□□□□□ -0.2
ECM30Q06673 ARE1YCR048W 1833 nt13.79□□□□□ -0.2
ECM30Q06673 YPR011CYPR011C 981 nt13.79□□□□□ -0.2
ECM30Q06673 LSM3YLR438C-A 270 nt13.78□□□□□ -0.2
ECM30Q06673 YLR236CYLR236C 324 nt13.73□□□□□ -0.21
ECM30Q06673 IMP2'YIL154C 1041 nt13.71□□□□□ -0.21
ECM30Q06673 POA1YBR022W 534 nt13.7□□□□□ -0.22
ECM30Q06673 PTC2YER089C 1395 nt13.69□□□□□ -0.22
ECM30Q06673 YEL076C-AYEL076C-A 651 nt13.67□□□□□ -0.22
ECM30Q06673 YEL076CYEL076C 651 nt13.67□□□□□ -0.22
ECM30Q06673 YLR464WYLR464W 651 nt13.67□□□□□ -0.22
ECM30Q06673 YHR049C-AYHR049C-A 297 nt13.61□□□□□ -0.23
ECM30Q06673 YLR154C-GYLR154C-G 150 nt13.53□□□□□ -0.24
ECM30Q06673 INM2YDR287W 879 nt13.51□□□□□ -0.25
ECM30Q06673 YBL100CYBL100C 315 nt13.51□□□□□ -0.25
ECM30Q06673 TRM9YML014W 840 nt13.5□□□□□ -0.25
ECM30Q06673 SPP1YPL138C 1062 nt13.5□□□□□ -0.25
ECM30Q06673 SIS1YNL007C 1059 nt13.48□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms