Protein–RNA interactions for Protein: Q07979

RSC58, Chromatin structure-remodeling complex protein RSC58, yeastyeast

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC58Q07979 YML009W-BYML009W-B 477 nt17.6■□□□□ 0.41
RSC58Q07979 NSR1YGR159C 1245 nt17.48■□□□□ 0.39
RSC58Q07979 NOP1YDL014W 984 nt17.2■□□□□ 0.34
RSC58Q07979 YKL036CYKL036C 393 nt15.98■□□□□ 0.15
RSC58Q07979 MDJ1YFL016C 1536 nt15.95■□□□□ 0.14
RSC58Q07979 Q0297Q0297 156 nt15.13■□□□□ 0.01
RSC58Q07979 SRX1YKL086W 384 nt15.05■□□□□ -0
RSC58Q07979 YJL027CYJL027C 417 nt14.91□□□□□ -0.02
RSC58Q07979 SCS3YGL126W 1143 nt14.6□□□□□ -0.07
RSC58Q07979 SSA3YBL075C 1950 nt14.25□□□□□ -0.13
RSC58Q07979 YCR051WYCR051W 669 nt14.21□□□□□ -0.13
RSC58Q07979 DBP2YNL112W 1641 nt13.91□□□□□ -0.18
RSC58Q07979 YOL085CYOL085C 342 nt13.84□□□□□ -0.19
RSC58Q07979 YBR190WYBR190W 312 nt13.74□□□□□ -0.21
RSC58Q07979 RPP1BYDL130W 321 nt13.55□□□□□ -0.24
RSC58Q07979 TRN1tP(UGG)A 72 nt13.55□□□□□ -0.24
RSC58Q07979 SUF9tP(UGG)F 72 nt13.55□□□□□ -0.24
RSC58Q07979 SUF8tP(UGG)H 72 nt13.55□□□□□ -0.24
RSC58Q07979 tP(UGG)LtP(UGG)L 72 nt13.55□□□□□ -0.24
RSC58Q07979 SUF7tP(UGG)M 72 nt13.55□□□□□ -0.24
RSC58Q07979 tP(UGG)N1tP(UGG)N1 72 nt13.55□□□□□ -0.24
RSC58Q07979 tP(UGG)N2tP(UGG)N2 72 nt13.55□□□□□ -0.24
RSC58Q07979 tP(UGG)O1tP(UGG)O1 72 nt13.55□□□□□ -0.24
RSC58Q07979 SUF11tP(UGG)O2 72 nt13.55□□□□□ -0.24
RSC58Q07979 PKP1YIL042C 1185 nt13.55□□□□□ -0.24
RSC58Q07979 Q0182Q0182 405 nt13.43□□□□□ -0.26
RSC58Q07979 RTC3YHR087W 336 nt13.43□□□□□ -0.26
RSC58Q07979 CCC1YLR220W 969 nt13.31□□□□□ -0.28
RSC58Q07979 SCJ1YMR214W 1134 nt13.15□□□□□ -0.3
RSC58Q07979 ATS1YAL020C 1002 nt13.1□□□□□ -0.31
RSC58Q07979 RVS167YDR388W 1449 nt12.99□□□□□ -0.33
RSC58Q07979 PET122YER153C 765 nt12.92□□□□□ -0.34
RSC58Q07979 PUT4YOR348C 1884 nt12.85□□□□□ -0.35
RSC58Q07979 tP(UGG)O3tP(UGG)O3 72 nt12.83□□□□□ -0.36
RSC58Q07979 SCR1SCR1 522 nt12.8□□□□□ -0.36
RSC58Q07979 MOT3YMR070W 1473 nt12.77□□□□□ -0.37
RSC58Q07979 RRN5YLR141W 1092 nt12.54□□□□□ -0.4
RSC58Q07979 ARE1YCR048W 1833 nt12.47□□□□□ -0.41
RSC58Q07979 YDJ1YNL064C 1230 nt12.45□□□□□ -0.42
RSC58Q07979 SHR5YOL110W 714 nt12.45□□□□□ -0.42
RSC58Q07979 POA1YBR022W 534 nt12.43□□□□□ -0.42
RSC58Q07979 URN1YPR152C 1398 nt12.38□□□□□ -0.43
RSC58Q07979 SAH1YER043C 1350 nt12.35□□□□□ -0.43
RSC58Q07979 YER088W-BYER088W-B 147 nt12.31□□□□□ -0.44
RSC58Q07979 SPT5YML010W 3192 nt12.31□□□□□ -0.44
RSC58Q07979 YHR049C-AYHR049C-A 297 nt12.3□□□□□ -0.44
RSC58Q07979 OPI9YLR338W 858 nt12.3□□□□□ -0.44
RSC58Q07979 RSB1YOR049C 1065 nt12.3□□□□□ -0.44
RSC58Q07979 SSA4YER103W 1929 nt12.28□□□□□ -0.44
RSC58Q07979 BSC6YOL137W 1494 nt12.24□□□□□ -0.45
RSC58Q07979 DEP1YAL013W 1218 nt12.23□□□□□ -0.45
RSC58Q07979 SSA1YAL005C 1929 nt12.2□□□□□ -0.46
RSC58Q07979 PST2YDR032C 597 nt12.13□□□□□ -0.47
RSC58Q07979 RPN10YHR200W 807 nt12.08□□□□□ -0.48
RSC58Q07979 GAR1YHR089C 618 nt12.07□□□□□ -0.48
RSC58Q07979 BUD23YCR047C 828 nt12.01□□□□□ -0.49
RSC58Q07979 BDF1YLR399C 2061 nt11.99□□□□□ -0.49
RSC58Q07979 YNL208WYNL208W 600 nt11.98□□□□□ -0.49
RSC58Q07979 PAC11YDR488C 1602 nt11.93□□□□□ -0.5
RSC58Q07979 PUN1YLR414C 792 nt11.93□□□□□ -0.5
RSC58Q07979 PTC2YER089C 1395 nt11.88□□□□□ -0.51
RSC58Q07979 NVJ2YPR091C 2313 nt11.81□□□□□ -0.52
RSC58Q07979 NAB2YGL122C 1578 nt11.79□□□□□ -0.52
RSC58Q07979 TAT1YBR069C 1860 nt11.79□□□□□ -0.52
RSC58Q07979 YJR018WYJR018W 363 nt11.78□□□□□ -0.52
RSC58Q07979 TIR1YER011W 765 nt11.7□□□□□ -0.54
RSC58Q07979 YKL097CYKL097C 411 nt11.68□□□□□ -0.54
RSC58Q07979 FPS1YLL043W 2010 nt11.6□□□□□ -0.55
RSC58Q07979 SHU1YHL006C 453 nt11.58□□□□□ -0.56
RSC58Q07979 MEP2YNL142W 1500 nt11.55□□□□□ -0.56
RSC58Q07979 FIS1YIL065C 468 nt11.54□□□□□ -0.56
RSC58Q07979 DAL1YIR027C 1383 nt11.54□□□□□ -0.56
RSC58Q07979 FPR4YLR449W 1179 nt11.52□□□□□ -0.57
RSC58Q07979 YJR120WYJR120W 351 nt11.46□□□□□ -0.57
RSC58Q07979 INM2YDR287W 879 nt11.44□□□□□ -0.58
RSC58Q07979 PHO4YFR034C 939 nt11.42□□□□□ -0.58
RSC58Q07979 RPP2BYDR382W 333 nt11.41□□□□□ -0.58
RSC58Q07979 YPS1YLR120C 1710 nt11.38□□□□□ -0.59
RSC58Q07979 SRB2YHR041C 633 nt11.37□□□□□ -0.59
RSC58Q07979 DCW1YKL046C 1350 nt11.35□□□□□ -0.59
RSC58Q07979 YAL037C-BYAL037C-B 975 nt11.31□□□□□ -0.6
RSC58Q07979 YHR165W-AYHR165W-A 312 nt11.3□□□□□ -0.6
RSC58Q07979 YDR095CYDR095C 411 nt11.22□□□□□ -0.61
RSC58Q07979 YBL100CYBL100C 315 nt11.22□□□□□ -0.61
RSC58Q07979 YOR139CYOR139C 393 nt11.21□□□□□ -0.61
RSC58Q07979 YGR021WYGR021W 873 nt11.2□□□□□ -0.62
RSC58Q07979 EMI2YDR516C 1503 nt11.19□□□□□ -0.62
RSC58Q07979 WWM1YFL010C 636 nt11.18□□□□□ -0.62
RSC58Q07979 HOM6YJR139C 1080 nt11.17□□□□□ -0.62
RSC58Q07979 YMR090WYMR090W 684 nt11.17□□□□□ -0.62
RSC58Q07979 YBR220CYBR220C 1683 nt11.14□□□□□ -0.63
RSC58Q07979 BDH2YAL061W 1254 nt11.1□□□□□ -0.63
RSC58Q07979 MNP1YGL068W 585 nt11.09□□□□□ -0.63
RSC58Q07979 FUN26YAL022C 1554 nt11.08□□□□□ -0.64
RSC58Q07979 YDL221WYDL221W 552 nt11.06□□□□□ -0.64
RSC58Q07979 NPL3YDR432W 1245 nt11.06□□□□□ -0.64
RSC58Q07979 YFL021C-AYFL021C-A 855 nt11.05□□□□□ -0.64
RSC58Q07979 ALF1YNL148C 765 nt11.04□□□□□ -0.64
RSC58Q07979 CAC2YML102W 1407 nt11.03□□□□□ -0.64
RSC58Q07979 RPP2AYOL039W 321 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 27.5 ms