Protein–RNA interactions for Protein: P38086

RDH54, DNA repair and recombination protein RDH54, yeastyeast

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RDH54P38086 YML009W-BYML009W-B 477 nt21.25■□□□□ 0.99
RDH54P38086 NOP1YDL014W 984 nt21■□□□□ 0.95
RDH54P38086 NSR1YGR159C 1245 nt20.55■□□□□ 0.88
RDH54P38086 YKL036CYKL036C 393 nt20.04■□□□□ 0.8
RDH54P38086 YJL027CYJL027C 417 nt18.81■□□□□ 0.6
RDH54P38086 Q0297Q0297 156 nt18.63■□□□□ 0.57
RDH54P38086 SCS3YGL126W 1143 nt18.57■□□□□ 0.56
RDH54P38086 MDJ1YFL016C 1536 nt18.38■□□□□ 0.53
RDH54P38086 SRX1YKL086W 384 nt18.35■□□□□ 0.53
RDH54P38086 SCJ1YMR214W 1134 nt17.44■□□□□ 0.38
RDH54P38086 YCR051WYCR051W 669 nt17.42■□□□□ 0.38
RDH54P38086 YOL085CYOL085C 342 nt17.31■□□□□ 0.36
RDH54P38086 PKP1YIL042C 1185 nt16.91■□□□□ 0.3
RDH54P38086 ATS1YAL020C 1002 nt16.82■□□□□ 0.28
RDH54P38086 RPP1BYDL130W 321 nt16.7■□□□□ 0.26
RDH54P38086 TRN1tP(UGG)A 72 nt16.16■□□□□ 0.18
RDH54P38086 SUF9tP(UGG)F 72 nt16.16■□□□□ 0.18
RDH54P38086 SUF8tP(UGG)H 72 nt16.16■□□□□ 0.18
RDH54P38086 tP(UGG)LtP(UGG)L 72 nt16.16■□□□□ 0.18
RDH54P38086 SUF7tP(UGG)M 72 nt16.16■□□□□ 0.18
RDH54P38086 tP(UGG)N1tP(UGG)N1 72 nt16.16■□□□□ 0.18
RDH54P38086 tP(UGG)N2tP(UGG)N2 72 nt16.16■□□□□ 0.18
RDH54P38086 tP(UGG)O1tP(UGG)O1 72 nt16.16■□□□□ 0.18
RDH54P38086 SUF11tP(UGG)O2 72 nt16.16■□□□□ 0.18
RDH54P38086 DBP2YNL112W 1641 nt16.15■□□□□ 0.18
RDH54P38086 CCC1YLR220W 969 nt15.94■□□□□ 0.14
RDH54P38086 SCR1SCR1 522 nt15.91■□□□□ 0.14
RDH54P38086 PET122YER153C 765 nt15.84■□□□□ 0.13
RDH54P38086 RTC3YHR087W 336 nt15.76■□□□□ 0.11
RDH54P38086 YBR190WYBR190W 312 nt15.73■□□□□ 0.11
RDH54P38086 tP(UGG)O3tP(UGG)O3 72 nt15.52■□□□□ 0.08
RDH54P38086 PST2YDR032C 597 nt15.47■□□□□ 0.07
RDH54P38086 RRN5YLR141W 1092 nt15.45■□□□□ 0.06
RDH54P38086 RSB1YOR049C 1065 nt15.35■□□□□ 0.05
RDH54P38086 YKL097CYKL097C 411 nt15.24■□□□□ 0.03
RDH54P38086 YER088W-BYER088W-B 147 nt15.16■□□□□ 0.02
RDH54P38086 RVS167YDR388W 1449 nt15.14■□□□□ 0.01
RDH54P38086 YDJ1YNL064C 1230 nt15.04■□□□□ -0
RDH54P38086 SHR5YOL110W 714 nt14.7□□□□□ -0.06
RDH54P38086 SHU1YHL006C 453 nt14.64□□□□□ -0.07
RDH54P38086 GAR1YHR089C 618 nt14.53□□□□□ -0.08
RDH54P38086 YOR139CYOR139C 393 nt14.47□□□□□ -0.09
RDH54P38086 SSA3YBL075C 1950 nt14.46□□□□□ -0.09
RDH54P38086 PUT4YOR348C 1884 nt14.44□□□□□ -0.1
RDH54P38086 URN1YPR152C 1398 nt14.31□□□□□ -0.12
RDH54P38086 DEP1YAL013W 1218 nt14.26□□□□□ -0.13
RDH54P38086 NPL3YDR432W 1245 nt14.21□□□□□ -0.13
RDH54P38086 YAL037C-BYAL037C-B 975 nt14.15□□□□□ -0.14
RDH54P38086 OPI9YLR338W 858 nt14.14□□□□□ -0.15
RDH54P38086 SAH1YER043C 1350 nt14.13□□□□□ -0.15
RDH54P38086 ARE1YCR048W 1833 nt14.11□□□□□ -0.15
RDH54P38086 RPN10YHR200W 807 nt14.04□□□□□ -0.16
RDH54P38086 TIR1YER011W 765 nt14.03□□□□□ -0.16
RDH54P38086 POA1YBR022W 534 nt14.02□□□□□ -0.17
RDH54P38086 YNL208WYNL208W 600 nt13.98□□□□□ -0.17
RDH54P38086 YHR049C-AYHR049C-A 297 nt13.95□□□□□ -0.18
RDH54P38086 tM(CAU)CtM(CAU)C 72 nt13.86□□□□□ -0.19
RDH54P38086 IMT4tM(CAU)E 72 nt13.86□□□□□ -0.19
RDH54P38086 IMT3tM(CAU)J3 72 nt13.86□□□□□ -0.19
RDH54P38086 IMT1tM(CAU)O1 72 nt13.86□□□□□ -0.19
RDH54P38086 IMT2tM(CAU)P 72 nt13.86□□□□□ -0.19
RDH54P38086 Q0182Q0182 405 nt13.82□□□□□ -0.2
RDH54P38086 YOL037CYOL037C 354 nt13.81□□□□□ -0.2
RDH54P38086 BSC6YOL137W 1494 nt13.74□□□□□ -0.21
RDH54P38086 YGR021WYGR021W 873 nt13.73□□□□□ -0.21
RDH54P38086 PUN1YLR414C 792 nt13.72□□□□□ -0.21
RDH54P38086 SSA1YAL005C 1929 nt13.69□□□□□ -0.22
RDH54P38086 MNP1YGL068W 585 nt13.67□□□□□ -0.22
RDH54P38086 HOM6YJR139C 1080 nt13.67□□□□□ -0.22
RDH54P38086 BUD23YCR047C 828 nt13.64□□□□□ -0.23
RDH54P38086 YJR018WYJR018W 363 nt13.64□□□□□ -0.23
RDH54P38086 MOT3YMR070W 1473 nt13.61□□□□□ -0.23
RDH54P38086 PTC2YER089C 1395 nt13.61□□□□□ -0.23
RDH54P38086 SRB2YHR041C 633 nt13.55□□□□□ -0.24
RDH54P38086 WWM1YFL010C 636 nt13.51□□□□□ -0.25
RDH54P38086 PUS2YGL063W 1113 nt13.48□□□□□ -0.25
RDH54P38086 RKM5YLR137W 1104 nt13.47□□□□□ -0.25
RDH54P38086 NAB2YGL122C 1578 nt13.46□□□□□ -0.25
RDH54P38086 MRPL8YJL063C 717 nt13.42□□□□□ -0.26
RDH54P38086 YLR281CYLR281C 468 nt13.4□□□□□ -0.26
RDH54P38086 YJR120WYJR120W 351 nt13.36□□□□□ -0.27
RDH54P38086 YFL021C-AYFL021C-A 855 nt13.34□□□□□ -0.27
RDH54P38086 RPP2BYDR382W 333 nt13.3□□□□□ -0.28
RDH54P38086 FPR4YLR449W 1179 nt13.23□□□□□ -0.29
RDH54P38086 WHI5YOR083W 888 nt13.23□□□□□ -0.29
RDH54P38086 DAL1YIR027C 1383 nt13.22□□□□□ -0.29
RDH54P38086 FIS1YIL065C 468 nt13.22□□□□□ -0.29
RDH54P38086 SPT5YML010W 3192 nt13.2□□□□□ -0.3
RDH54P38086 INM2YDR287W 879 nt13.19□□□□□ -0.3
RDH54P38086 FMP45YDL222C 930 nt13.14□□□□□ -0.31
RDH54P38086 ADO1YJR105W 1023 nt13.14□□□□□ -0.31
RDH54P38086 UBX6YJL048C 1191 nt13.13□□□□□ -0.31
RDH54P38086 PHO4YFR034C 939 nt13.11□□□□□ -0.31
RDH54P38086 YCH1YGR203W 447 nt13.09□□□□□ -0.31
RDH54P38086 DSK2YMR276W 1122 nt13.05□□□□□ -0.32
RDH54P38086 BDH2YAL061W 1254 nt13.04□□□□□ -0.32
RDH54P38086 LSM3YLR438C-A 270 nt13.03□□□□□ -0.32
RDH54P38086 IMP2'YIL154C 1041 nt13.02□□□□□ -0.33
RDH54P38086 YPR011CYPR011C 981 nt13.02□□□□□ -0.33
RDH54P38086 YBL100CYBL100C 315 nt13.01□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms