Protein–RNA interactions for Protein: Q00362

CDC55, Protein phosphatase PP2A regulatory subunit B, yeastyeast

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC55Q00362 YML009W-BYML009W-B 477 nt21.29■■□□□ 1
CDC55Q00362 NSR1YGR159C 1245 nt21.21■□□□□ 0.99
CDC55Q00362 NOP1YDL014W 984 nt20.65■□□□□ 0.9
CDC55Q00362 YKL036CYKL036C 393 nt18.99■□□□□ 0.63
CDC55Q00362 MDJ1YFL016C 1536 nt18.93■□□□□ 0.62
CDC55Q00362 Q0297Q0297 156 nt18.05■□□□□ 0.48
CDC55Q00362 SRX1YKL086W 384 nt18.04■□□□□ 0.48
CDC55Q00362 YJL027CYJL027C 417 nt17.72■□□□□ 0.43
CDC55Q00362 SCS3YGL126W 1143 nt17.24■□□□□ 0.35
CDC55Q00362 YCR051WYCR051W 669 nt17.14■□□□□ 0.33
CDC55Q00362 DBP2YNL112W 1641 nt16.71■□□□□ 0.27
CDC55Q00362 YOL085CYOL085C 342 nt16.47■□□□□ 0.23
CDC55Q00362 TRN1tP(UGG)A 72 nt16.35■□□□□ 0.21
CDC55Q00362 SUF9tP(UGG)F 72 nt16.35■□□□□ 0.21
CDC55Q00362 SUF8tP(UGG)H 72 nt16.35■□□□□ 0.21
CDC55Q00362 tP(UGG)LtP(UGG)L 72 nt16.35■□□□□ 0.21
CDC55Q00362 SUF7tP(UGG)M 72 nt16.35■□□□□ 0.21
CDC55Q00362 tP(UGG)N1tP(UGG)N1 72 nt16.35■□□□□ 0.21
CDC55Q00362 tP(UGG)N2tP(UGG)N2 72 nt16.35■□□□□ 0.21
CDC55Q00362 tP(UGG)O1tP(UGG)O1 72 nt16.35■□□□□ 0.21
CDC55Q00362 SUF11tP(UGG)O2 72 nt16.35■□□□□ 0.21
CDC55Q00362 PKP1YIL042C 1185 nt16.25■□□□□ 0.19
CDC55Q00362 CCC1YLR220W 969 nt16.24■□□□□ 0.19
CDC55Q00362 RPP1BYDL130W 321 nt16.2■□□□□ 0.18
CDC55Q00362 YBR190WYBR190W 312 nt16.13■□□□□ 0.17
CDC55Q00362 RTC3YHR087W 336 nt15.8■□□□□ 0.12
CDC55Q00362 RVS167YDR388W 1449 nt15.68■□□□□ 0.1
CDC55Q00362 SCJ1YMR214W 1134 nt15.59■□□□□ 0.09
CDC55Q00362 PET122YER153C 765 nt15.51■□□□□ 0.07
CDC55Q00362 tP(UGG)O3tP(UGG)O3 72 nt15.46■□□□□ 0.07
CDC55Q00362 ATS1YAL020C 1002 nt15.41■□□□□ 0.06
CDC55Q00362 SCR1SCR1 522 nt15.3■□□□□ 0.04
CDC55Q00362 SHR5YOL110W 714 nt15.11■□□□□ 0.01
CDC55Q00362 RRN5YLR141W 1092 nt15.06■□□□□ 0
CDC55Q00362 YDJ1YNL064C 1230 nt14.95□□□□□ -0.02
CDC55Q00362 Q0182Q0182 405 nt14.8□□□□□ -0.04
CDC55Q00362 URN1YPR152C 1398 nt14.75□□□□□ -0.05
CDC55Q00362 YER088W-BYER088W-B 147 nt14.75□□□□□ -0.05
CDC55Q00362 DEP1YAL013W 1218 nt14.75□□□□□ -0.05
CDC55Q00362 RSB1YOR049C 1065 nt14.72□□□□□ -0.05
CDC55Q00362 PUT4YOR348C 1884 nt14.71□□□□□ -0.05
CDC55Q00362 GAR1YHR089C 618 nt14.66□□□□□ -0.06
CDC55Q00362 OPI9YLR338W 858 nt14.54□□□□□ -0.08
CDC55Q00362 RPN10YHR200W 807 nt14.5□□□□□ -0.09
CDC55Q00362 SAH1YER043C 1350 nt14.49□□□□□ -0.09
CDC55Q00362 MOT3YMR070W 1473 nt14.49□□□□□ -0.09
CDC55Q00362 YNL208WYNL208W 600 nt14.47□□□□□ -0.09
CDC55Q00362 ARE1YCR048W 1833 nt14.43□□□□□ -0.1
CDC55Q00362 PST2YDR032C 597 nt14.29□□□□□ -0.12
CDC55Q00362 POA1YBR022W 534 nt14.27□□□□□ -0.13
CDC55Q00362 YHR049C-AYHR049C-A 297 nt14.24□□□□□ -0.13
CDC55Q00362 TIR1YER011W 765 nt14.16□□□□□ -0.14
CDC55Q00362 PUN1YLR414C 792 nt14.11□□□□□ -0.15
CDC55Q00362 YJR018WYJR018W 363 nt14.07□□□□□ -0.16
CDC55Q00362 SSA1YAL005C 1929 nt14.01□□□□□ -0.17
CDC55Q00362 PTC2YER089C 1395 nt13.98□□□□□ -0.17
CDC55Q00362 BSC6YOL137W 1494 nt13.96□□□□□ -0.17
CDC55Q00362 BUD23YCR047C 828 nt13.92□□□□□ -0.18
CDC55Q00362 SSA3YBL075C 1950 nt13.84□□□□□ -0.19
CDC55Q00362 YJR120WYJR120W 351 nt13.84□□□□□ -0.19
CDC55Q00362 NAB2YGL122C 1578 nt13.79□□□□□ -0.2
CDC55Q00362 SRB2YHR041C 633 nt13.78□□□□□ -0.2
CDC55Q00362 RPP2BYDR382W 333 nt13.75□□□□□ -0.21
CDC55Q00362 SHU1YHL006C 453 nt13.73□□□□□ -0.21
CDC55Q00362 YKL097CYKL097C 411 nt13.67□□□□□ -0.22
CDC55Q00362 DAL1YIR027C 1383 nt13.59□□□□□ -0.23
CDC55Q00362 FPR4YLR449W 1179 nt13.59□□□□□ -0.23
CDC55Q00362 FIS1YIL065C 468 nt13.58□□□□□ -0.24
CDC55Q00362 INM2YDR287W 879 nt13.57□□□□□ -0.24
CDC55Q00362 YAL037C-BYAL037C-B 975 nt13.57□□□□□ -0.24
CDC55Q00362 WWM1YFL010C 636 nt13.53□□□□□ -0.24
CDC55Q00362 BDH2YAL061W 1254 nt13.47□□□□□ -0.25
CDC55Q00362 PHO4YFR034C 939 nt13.46□□□□□ -0.25
CDC55Q00362 YBL100CYBL100C 315 nt13.43□□□□□ -0.26
CDC55Q00362 YGR021WYGR021W 873 nt13.39□□□□□ -0.27
CDC55Q00362 HOM6YJR139C 1080 nt13.36□□□□□ -0.27
CDC55Q00362 SPT5YML010W 3192 nt13.32□□□□□ -0.28
CDC55Q00362 MNP1YGL068W 585 nt13.3□□□□□ -0.28
CDC55Q00362 YFL021C-AYFL021C-A 855 nt13.28□□□□□ -0.28
CDC55Q00362 LSM3YLR438C-A 270 nt13.28□□□□□ -0.28
CDC55Q00362 FUN26YAL022C 1554 nt13.28□□□□□ -0.28
CDC55Q00362 TRM9YML014W 840 nt13.24□□□□□ -0.29
CDC55Q00362 YPS1YLR120C 1710 nt13.22□□□□□ -0.29
CDC55Q00362 RKM5YLR137W 1104 nt13.17□□□□□ -0.3
CDC55Q00362 YOR139CYOR139C 393 nt13.15□□□□□ -0.3
CDC55Q00362 YDR095CYDR095C 411 nt13.13□□□□□ -0.31
CDC55Q00362 MEP2YNL142W 1500 nt13.1□□□□□ -0.31
CDC55Q00362 YHR165W-AYHR165W-A 312 nt13.1□□□□□ -0.31
CDC55Q00362 ALF1YNL148C 765 nt13.1□□□□□ -0.31
CDC55Q00362 CCT6YDR188W 1641 nt13.09□□□□□ -0.31
CDC55Q00362 NPL3YDR432W 1245 nt13.05□□□□□ -0.32
CDC55Q00362 YOL037CYOL037C 354 nt13.01□□□□□ -0.33
CDC55Q00362 SUF2tP(AGG)C 72 nt12.98□□□□□ -0.33
CDC55Q00362 SUF10tP(AGG)N 72 nt12.98□□□□□ -0.33
CDC55Q00362 DCW1YKL046C 1350 nt12.92□□□□□ -0.34
CDC55Q00362 SIS1YNL007C 1059 nt12.9□□□□□ -0.34
CDC55Q00362 RPP2AYOL039W 321 nt12.9□□□□□ -0.34
CDC55Q00362 SSA4YER103W 1929 nt12.86□□□□□ -0.35
CDC55Q00362 PTP1YDL230W 1008 nt12.86□□□□□ -0.35
CDC55Q00362 CAC2YML102W 1407 nt12.78□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms