RNA–Protein interactions for RNA: ENST00000590282.5

NFIC-210, Transcript of nuclear factor I C, humanhuman

TSL 2 BASIC

Gene NFIC, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-210ENST00000590282 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
NFIC-210ENST00000590282 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
NFIC-210ENST00000590282 ZCCHC6Q5VYS8 1495 aaKnown RBP33.03■■■□□ 2.88
NFIC-210ENST00000590282 ABCC9O60706 1549 aa32.93■■■□□ 2.86
NFIC-210ENST00000590282 DCAF1Q9Y4B6 1507 aa32.64■■■□□ 2.82
NFIC-210ENST00000590282 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
NFIC-210ENST00000590282 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
NFIC-210ENST00000590282 NACADO15069 1562 aa32.29■■■□□ 2.76
NFIC-210ENST00000590282 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
NFIC-210ENST00000590282 SHROOM4Q9ULL8 1493 aa31.66■■■□□ 2.66
NFIC-210ENST00000590282 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
NFIC-210ENST00000590282 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
NFIC-210ENST00000590282 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
NFIC-210ENST00000590282 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
NFIC-210ENST00000590282 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
NFIC-210ENST00000590282 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
NFIC-210ENST00000590282 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
NFIC-210ENST00000590282 SMARCA4P51532 1647 aa30.37■■■□□ 2.45
NFIC-210ENST00000590282 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
NFIC-210ENST00000590282 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
NFIC-210ENST00000590282 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
NFIC-210ENST00000590282 WIZO95785 1651 aa30.09■■■□□ 2.41
NFIC-210ENST00000590282 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
NFIC-210ENST00000590282 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
NFIC-210ENST00000590282 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.38
NFIC-210ENST00000590282 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
NFIC-210ENST00000590282 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
NFIC-210ENST00000590282 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
NFIC-210ENST00000590282 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
NFIC-210ENST00000590282 HMGXB3Q12766 1538 aa29.75■■■□□ 2.35
NFIC-210ENST00000590282 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
NFIC-210ENST00000590282 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
NFIC-210ENST00000590282 CFTRP13569 1480 aa29.01■■■□□ 2.23
NFIC-210ENST00000590282 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
NFIC-210ENST00000590282 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
NFIC-210ENST00000590282 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
NFIC-210ENST00000590282 NESP48681 1621 aa28.8■■■□□ 2.2
NFIC-210ENST00000590282 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
NFIC-210ENST00000590282 ABCC8Q09428 1581 aa28.69■■■□□ 2.18
NFIC-210ENST00000590282 FANCD2Q9BXW9 1451 aa28.63■■■□□ 2.17
NFIC-210ENST00000590282 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
NFIC-210ENST00000590282 WRNQ14191 1432 aaPredicted RBP eCLIP28.59■■■□□ 2.171e-7■□□□□ 10.2
NFIC-210ENST00000590282 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
NFIC-210ENST00000590282 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
NFIC-210ENST00000590282 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
NFIC-210ENST00000590282 KIF21AQ7Z4S6 1674 aa28.49■■■□□ 2.15
NFIC-210ENST00000590282 TOP2BQ02880 1626 aa28.44■■■□□ 2.14
NFIC-210ENST00000590282 CUX1P39880 1505 aa28.44■■■□□ 2.14
NFIC-210ENST00000590282 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
NFIC-210ENST00000590282 DNMBPQ6XZF7 1577 aa28.34■■■□□ 2.13
NFIC-210ENST00000590282 URB2Q14146 1524 aaKnown RBP28.31■■■□□ 2.12
NFIC-210ENST00000590282 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
NFIC-210ENST00000590282 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
NFIC-210ENST00000590282 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
NFIC-210ENST00000590282 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
NFIC-210ENST00000590282 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
NFIC-210ENST00000590282 WDR62O43379 1518 aa28.18■■■□□ 2.1
NFIC-210ENST00000590282 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
NFIC-210ENST00000590282 SOGA1O94964 1423 aa28.05■■■□□ 2.08
NFIC-210ENST00000590282 EEA1Q15075 1411 aa28■■■□□ 2.07
NFIC-210ENST00000590282 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
NFIC-210ENST00000590282 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
NFIC-210ENST00000590282 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
NFIC-210ENST00000590282 CUX2O14529 1486 aa27.95■■■□□ 2.06
NFIC-210ENST00000590282 WDR97A6NE52 1622 aa27.94■■■□□ 2.06
NFIC-210ENST00000590282 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
NFIC-210ENST00000590282 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
NFIC-210ENST00000590282 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
NFIC-210ENST00000590282 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
NFIC-210ENST00000590282 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
NFIC-210ENST00000590282 ABCA5Q8WWZ7 1642 aa27.79■■■□□ 2.04
NFIC-210ENST00000590282 TDRD9Q8NDG6 1382 aaKnown RBP27.71■■■□□ 2.03
NFIC-210ENST00000590282 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
NFIC-210ENST00000590282 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
NFIC-210ENST00000590282 IGF1RP08069 1367 aa27.68■■■□□ 2.02
NFIC-210ENST00000590282 KIF21BO75037 1637 aa27.67■■■□□ 2.02
NFIC-210ENST00000590282 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
NFIC-210ENST00000590282 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.014e-7■■■■■ 30.6
NFIC-210ENST00000590282 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
NFIC-210ENST00000590282 EIF4G3O43432 1585 aaKnown RBP27.63■■■□□ 2.01
NFIC-210ENST00000590282 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
NFIC-210ENST00000590282 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
NFIC-210ENST00000590282 CUL7Q14999 1698 aa27.58■■■□□ 2
NFIC-210ENST00000590282 GOLGA3Q08378 1498 aa27.56■■■□□ 2
NFIC-210ENST00000590282 GRIN2BQ13224 1484 aa27.56■■■□□ 2
NFIC-210ENST00000590282 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
NFIC-210ENST00000590282 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
NFIC-210ENST00000590282 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
NFIC-210ENST00000590282 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
NFIC-210ENST00000590282 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
NFIC-210ENST00000590282 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
NFIC-210ENST00000590282 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
NFIC-210ENST00000590282 TNIKQ9UKE5 1360 aa27.38■■□□□ 1.97
NFIC-210ENST00000590282 UBTFP17480 764 aaKnown RBP27.35■■□□□ 1.97
NFIC-210ENST00000590282 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
NFIC-210ENST00000590282 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
NFIC-210ENST00000590282 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
NFIC-210ENST00000590282 CTTNBP2Q8WZ74 1663 aa27.19■■□□□ 1.94
NFIC-210ENST00000590282 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
NFIC-210ENST00000590282 CHD1O14646 1710 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms